The network for 'alternative mrna splicing via spliceosome' in your query organism is displayed on the left, if relationships are supported by the integrated data. Moving any of the genes in that network will simultaneously update the homologs in the networks displayed to the right (if they exist). Additionally, hovering over any nodes will highlight the identified functionally similar homologs in the other networks. Last, the bar above the networks allows you to remove/add additional organisms. Simily drag and drop the organism names in the desired order.

Multiple Organisms

alternative mrna splicing via spliceosome

The process of generating multiple mRNA molecules from a given set of exons by differential use of exons from the primary transcript(s) to form multiple mature mRNAs that vary in their exon composition.

Drosophila melanogaster
Name Description Probability Func Analog Organism
14-3-3epsilon CG31196 gene product from transcript CG31196-RA 0.768
Spt6 CG12225 gene product from transcript CG12225-RA 0.549
bl bancal 0.425
SF2 CG6987 gene product from transcript CG6987-RA 0.372
Hrb27C Heterogeneous nuclear ribonucleoprotein at 27C 0.304
CG6418 CG6418 gene product from transcript CG6418-RB 0.249
pUf68 poly U binding factor 68kD 0.225
Ntf-2 Nuclear transport factor-2 0.219
lark CG8597 gene product from transcript CG8597-RD 0.203
CG6197 CG6197 gene product from transcript CG6197-RA 0.202
gish gilgamesh 0.202
wds will die slowly 0.190
Lam Lamin 0.184
sqd squid 0.169
RpII140 RNA polymerase II 140kD subunit 0.164
Psi P-element somatic inhibitor 0.163
CG4747 CG4747 gene product from transcript CG4747-RB 0.163
U2af38 U2 small nuclear riboprotein auxiliary factor 38 0.162
mus201 mutagen-sensitive 201 0.162
tsu tsunagi 0.159
Rat1 CG10354 gene product from transcript CG10354-RA 0.153
Rsf1 Repressor splicing factor 1 0.151
His3.3B Histone H3.3B 0.147
CG2199 CG2199 gene product from transcript CG2199-RB 0.118
CG5746 CG5746 gene product from transcript CG5746-RB 0.117
Mfap1 Microfibril-associated protein 1 0.116
Zn72D CG5215 gene product from transcript CG5215-RB 0.109
Aac11 CG6582 gene product from transcript CG6582-RA 0.106
U2af50 U2 small nuclear riboprotein auxiliary factor 50 0.105
CG2469 CG2469 gene product from transcript CG2469-RB 0.100
Pabp2 CG2163 gene product from transcript CG2163-RA 0.099
CG4751 CG4751 gene product from transcript CG4751-RA 0.097
SRPK CG8174 gene product from transcript CG8174-RA 0.090
CG32685 CG32685 gene product from transcript CG32685-RC 0.089
CG4049 CG4049 gene product from transcript CG4049-RA 0.083
spn-A spindle A 0.082
Sep2 Septin-2 0.080
CG13900 CG13900 gene product from transcript CG13900-RA 0.079
snRNP-U1-70K small ribonucleoprotein particle U1 subunit 70K 0.079
SF1 Splicing factor 1 0.078
vimar visceral mesodermal armadillo-repeats 0.076
Chrac-14 CG13399 gene product from transcript CG13399-RA 0.072
CG8149 CG8149 gene product from transcript CG8149-RA 0.071
CG4612 CG4612 gene product from transcript CG4612-RA 0.070
qkr58E-1 quaking related 58E-1 0.070
CG7185 CG7185 gene product from transcript CG7185-RA 0.070
brm brahma 0.068
CG32479 CG32479 gene product from transcript CG32479-RA 0.066
Aef1 Adult enhancer factor 1 0.066
CG5290 CG5290 gene product from transcript CG5290-RA 0.065
qkr58E-3 quaking related 58E-3 0.065
Pep Protein on ecdysone puffs 0.064
CG1910 CG1910 gene product from transcript CG1910-RB 0.063
tho2 CG31671 gene product from transcript CG31671-RA 0.063
scny scrawny 0.063
lig lingerer 0.061
B52 CG10851 gene product from transcript CG10851-RB 0.061
caz cabeza 0.061
Hrb98DE Heterogeneous nuclear ribonucleoprotein at 98DE 0.060
eIF4AIII CG7483 gene product from transcript CG7483-RA 0.059
CG6854 CG6854 gene product from transcript CG6854-RC 0.058
CG6610 CG6610 gene product from transcript CG6610-RA 0.058
HmgD High mobility group protein D 0.057
Mapmodulin CG5784 gene product from transcript CG5784-RB 0.055
CG10324 CG10324 gene product from transcript CG10324-RA 0.055
Taf4 TBP-associated factor 4 0.055
His2Av Histone H2A variant 0.054
zpg zero population growth 0.054
Rcd1 Reduction in Cnn dots 1 0.053
CG7971 CG7971 gene product from transcript CG7971-RC 0.053
DMAP1 CG11132 gene product from transcript CG11132-RA 0.053
Bap55 Brahma associated protein 55kD 0.052
Dmn Dynamitin 0.050
mxc multi sex combs 0.050
CG6686 CG6686 gene product from transcript CG6686-RB 0.049
Cbp80 cap binding protein 80 0.048
CG3800 CG3800 gene product from transcript CG3800-RA 0.048
Smr Smrter 0.047
smt3 CG4494 gene product from transcript CG4494-RA 0.046
CG9667 CG9667 gene product from transcript CG9667-RA 0.046
His3.3A Histone H3.3A 0.046
Su(var)3-3 Suppressor of variegation 3-3 0.045
mor moira 0.044
MEP-1 CG1244 gene product from transcript CG1244-RG 0.043
CG11188 CG11188 gene product from transcript CG11188-RA 0.043
fne found in neurons 0.043
su(Hw) suppressor of Hairy wing 0.043
CG17838 CG17838 gene product from transcript CG17838-RA 0.043
Slu7 CG1420 gene product from transcript CG1420-RA 0.042
qkr54B quaking related 54B 0.042
phr photorepair 0.042
Prp8 pre-mRNA processing factor 8 0.041
Rnp4F RNA-binding protein 4F 0.041
loqs loquacious 0.040
l(2)NC136 lethal (2) NC136 0.040
CG9776 CG9776 gene product from transcript CG9776-RA 0.040
Prp19 CG5519 gene product from transcript CG5519-RA 0.040
CG17777 CG17777 gene product from transcript CG17777-RB 0.039
Pcf11 CG10228 gene product from transcript CG10228-RE 0.039
yps ypsilon schachtel 0.039
Loading network...
Caenorhabditis elegans
Name Description Probability Func Analog Organism
rsp-8 Protein RSP-8 0.121
aly-3 Protein ALY-3 0.088
taf-4 Protein TAF-4 0.080
dpy-30 Protein DPY-30 0.055
mdt-29 Protein MDT-29 0.048
CELE_W03F9.10 Protein W03F9.10 0.046
T28D9.1 Protein T28D9.1 0.044
set-2 Protein SET-2 0.044
attf-2 Protein ATTF-2 0.032
szy-20 Protein SZY-20 0.030
rsp-1 Protein RSP-1 0.026
lst-3 Protein LST-3 0.026
CELE_B0285.3 Protein B0285.3 0.022
asd-1 Protein ASD-1 0.021
cdc-26 Protein CDC-26 0.020
fib-1 Protein FIB-1 0.019
pabp-2 Protein PABP-2 0.019
snr-4 Protein SNR-4 0.017
mat-3 Protein MAT-3 0.017
lin-35 Protein LIN-35 0.017
T11G6.8 Protein T11G6.8 0.017
dao-5 Protein DAO-5 0.016
fust-1 Protein FUST-1 0.016
rsp-2 Protein RSP-2 0.016
CELE_Y69A2AR.28 Protein Y69A2AR.28 0.015
lsm-4 Protein LSM-4 0.015
tdp-1 Protein TDP-1 0.014
pha-4 Protein PHA-4 0.013
ZK686.4 Protein ZK686.4 0.013
uaf-1 Protein UAF-1 0.013
uaf-2 Protein UAF-2 0.012
npp-4 Protein NPP-4 0.012
F08B4.7 Protein F08B4.7 0.012
rsp-3 Protein RSP-3 0.012
F56A6.4 Protein F56A6.4 0.012
rpb-6 Protein RPB-6 0.011
cacn-1 Protein CACN-1 0.011
emb-4 Protein EMB-4 0.010
kin-10 Protein KIN-10 0.010
E01A2.2 Protein E01A2.2 0.010
T08A11.2 Protein T08A11.2 0.010
Loading network...
Danio rerio
Name Description Probability Func Analog Organism
rbmx RNA binding motif protein, X-linked 0.979
snrnp70 small nuclear ribonucleoprotein 70 (U1) 0.950
khdrbs1a KH domain containing, RNA binding, signal transduction associated 1a 0.950
sf1 splicing factor 1 0.928
safb scaffold attachment factor B 0.885
tra2a transformer-2 alpha 0.880
srsf2 serine/arginine-rich splicing factor 2 0.871
mbnl2 muscleblind-like 2 (Drosophila) 0.855
hnrnpa1 heterogeneous nuclear ribonucleoprotein A1 0.844
hnrnpab heterogeneous nuclear ribonucleoprotein A/B 0.836
srsf6a serine/arginine-rich splicing factor 6a 0.832
ddx39aa DEAD (Asp-Glu-Ala-Asp) box polypeptide 39Aa 0.800
elavl1 ELAV (embryonic lethal, abnormal vision, Drosophila)-like 1 (Hu antigen R) 0.760
snrpd3l small nuclear ribonucleoprotein D3 polypeptide, like 0.750
zgc:77052 zgc:77052 0.733
api5 apoptosis inhibitor 5 0.726
cpsf6 cleavage and polyadenylation specific factor 6 0.697
puf60b poly-U binding splicing factor b 0.697
rbm39b RNA binding motif protein 39b 0.680
ubtf upstream binding transcription factor, RNA polymerase I 0.678
hnrnpa0 heterogeneous nuclear ribonucleoprotein A0 0.674
smarca5 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 0.664
pcbp2 poly(rC) binding protein 2 0.587
khdrbs1b KH domain containing, RNA binding, signal transduction associated 1b 0.577
ilf2 interleukin enhancer binding factor 2 0.567
srsf11 serine/arginine-rich splicing factor 11 0.557
anp32e acidic (leucine-rich) nuclear phosphoprotein 32 family, member E 0.551
pnn pinin, desmosome associated protein 0.546
smu1 smu-1 suppressor of mec-8 and unc-52 homolog (C. elegans) 0.520
hnrpl heterogeneous nuclear ribonucleoprotein L 0.519
zgc:77155 zgc:77155 0.518
srsf4 serine/arginine-rich splicing factor 4 0.508
tcea1 transcription elongation factor A (SII), 1 0.507
sart1 squamous cell carcinoma antigen recognised by T cells 0.507
si:ch211-51e12.7 si:ch211-51e12.7 0.506
rbm8a RNA binding motif protein 8A 0.497
mbd3a methyl-CpG binding domain protein 3a 0.468
matr3l matrin 3-like 0.445
ddx39b DEAD (Asp-Glu-Ala-Asp) box polypeptide 39b 0.442
zgc:112425 zgc:112425 0.438
rnps1 RNA binding protein S1, serine-rich domain 0.429
yy1a YY1 transcription factor a 0.422
ewsr1b Ewing sarcoma breakpoint region 1b 0.420
cx43.4 connexin 43.4 0.413
ilf3a interleukin enhancer binding factor 3a 0.400
thoc4 THO complex 4 0.393
trnau1apl tRNA selenocysteine 1 associated protein 1, like 0.383
setb SET translocation (myeloid leukemia-associated) B 0.368
sfrs3b splicing factor, arginine/serine-rich 3b 0.357
prpf31 PRP31 pre-mRNA processing factor 31 homolog (yeast) 0.354
atf4b2 activating transcription factor 4b2 0.353
gabpa GA-binding protein transcription factor, alpha subunit 0.348
zgc:136380 zgc:136380 0.342
snrpd1 small nuclear ribonucleoprotein D1 polypeptide 0.336
LOC100330645 heterogeneous nuclear ribonucleoprotein U-like protein 1-like 0.334
xrn2 5'-3' exoribonuclease 2 0.326
prpf39 PRP39 pre-mRNA processing factor 39 homolog (yeast) 0.325
ddx5 DEAD (Asp-Glu-Ala-Asp) box polypeptide 5 0.324
eif4a3 eukaryotic translation initiation factor 4A, isoform 3 0.318
hnrnpm heterogeneous nuclear ribonucleoprotein M 0.312
cirbp cold inducible RNA binding protein 0.311
luc7l LUC7-like (S. cerevisiae) 0.305
ube2nb ubiquitin-conjugating enzyme E2Nb 0.300
hnrnph1l heterogeneous nuclear ribonucleoprotein H1, like 0.298
zgc:112982 zgc:112982 0.273
zgc:73265 zgc:73265 0.271
ddx42 DEAD (Asp-Glu-Ala-Asp) box polypeptide 42 0.270
eif1b eukaryotic translation initiation factor 1B 0.270
fubp1 far upstream element (FUSE) binding protein 1 0.269
sf3b1 splicing factor 3b, subunit 1 0.267
sf3b5 splicing factor 3b, subunit 5 0.266
zgc:103440 zgc:103440 0.264
hnrpdl heterogeneous nuclear ribonucleoprotein D-like 0.262
sf3b4 splicing factor 3b, subunit 4 0.262
smarce1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 0.261
ef1a elongation factor 1-alpha 0.260
hnrnpa0l heterogeneous nuclear ribonucleoprotein A0, like 0.257
phf5a PHD finger protein 5A 0.252
ptbp2 polypyrimidine tract binding protein 2 0.250
sumo3a SMT3 suppressor of mif two 3 homolog 3a 0.244
snrnp40 small nuclear ribonucleoprotein 40 (U5) 0.241
snrpb2 small nuclear ribonucleoprotein polypeptide B2 0.238
ddx19 DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 19 (DBP5 homolog, yeast) 0.230
tmpoa thymopoietin a 0.225
si:ch211-59d15.5 si:ch211-59d15.5 0.224
zgc:92194 zgc:92194 0.222
rbm39a RNA binding motif protein 39a 0.221
leo1 Leo1, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae) 0.216
eftud2 elongation factor Tu GTP binding domain containing 2 0.213
si:ch211-114c12.2 si:ch211-114c12.2 0.211
hnrpr heterogeneous nuclear ribonucleoprotein R 0.211
acvr1l activin A receptor, type I like 0.208
ilf3b interleukin enhancer binding factor 3b 0.204
cpsf2 cleavage and polyadenylation specific factor 2 0.203
strap serine/threonine kinase receptor associated protein 0.202
h3f3b.1 H3 histone, family 3B.1 0.198
rbm4.3 RNA binding motif protein 4.3 0.196
znf207a zinc finger protein 207, a 0.195
zfr zinc finger RNA binding protein 0.194
thoc1 THO complex 1 0.190
Loading network...
Homo sapiens
Name Description Probability Func Analog Organism
U2AF2 U2 small nuclear RNA auxiliary factor 2 0.993
SRPK2 SRSF protein kinase 2 0.968
SRRM1 serine/arginine repetitive matrix 1 0.911
RBM39 RNA binding motif protein 39 0.895
SUGP1 SURP and G patch domain containing 1 0.886
PRPF38A PRP38 pre-mRNA processing factor 38 (yeast) domain containing A 0.876
EIF4A3 eukaryotic translation initiation factor 4A3 0.834
SRSF3 serine/arginine-rich splicing factor 3 0.816
HNRNPH1 heterogeneous nuclear ribonucleoprotein H1 (H) 0.810
SF3A2 splicing factor 3a, subunit 2, 66kDa 0.793
RBM8A RNA binding motif protein 8A 0.777
MAGOH mago-nashi homolog, proliferation-associated (Drosophila) 0.766
HNRNPK heterogeneous nuclear ribonucleoprotein K 0.722
HNRNPM heterogeneous nuclear ribonucleoprotein M 0.705
PRPF3 PRP3 pre-mRNA processing factor 3 homolog (S. cerevisiae) 0.677
HNRNPH3 heterogeneous nuclear ribonucleoprotein H3 (2H9) 0.647
SRSF7 serine/arginine-rich splicing factor 7 0.639
PNN pinin, desmosome associated protein 0.564
LUC7L3 LUC7-like 3 (S. cerevisiae) 0.551
RNPS1 RNA binding protein S1, serine-rich domain 0.549
SFPQ splicing factor proline/glutamine-rich 0.539
SRSF1 serine/arginine-rich splicing factor 1 0.498
SF3B1 splicing factor 3b, subunit 1, 155kDa 0.466
QKI quaking homolog, KH domain RNA binding (mouse) 0.451
FUBP1 far upstream element (FUSE) binding protein 1 0.448
SRSF2 serine/arginine-rich splicing factor 2 0.418
EED embryonic ectoderm development 0.411
DDX3X DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked 0.395
CDC5L CDC5 cell division cycle 5-like (S. pombe) 0.395
PCBP1 poly(rC) binding protein 1 0.385
SNRPA small nuclear ribonucleoprotein polypeptide A 0.385
TOP1 topoisomerase (DNA) I 0.345
RBFOX2 RNA binding protein, fox-1 homolog (C. elegans) 2 0.292
HNRNPC heterogeneous nuclear ribonucleoprotein C (C1/C2) 0.285
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) 0.273
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.259
TARDBP TAR DNA binding protein 0.258
ELAVL1 ELAV (embryonic lethal, abnormal vision, Drosophila)-like 1 (Hu antigen R) 0.245
ARGLU1 arginine and glutamate rich 1 0.231
SNRPB small nuclear ribonucleoprotein polypeptides B and B1 0.220
SF1 splicing factor 1 0.214
TRA2B transformer 2 beta homolog (Drosophila) 0.211
THOC4 THO complex 4 0.206
WBP4 WW domain binding protein 4 (formin binding protein 21) 0.191
SF3B4 splicing factor 3b, subunit 4, 49kDa 0.191
CTNNBL1 catenin, beta like 1 0.175
HNRPDL heterogeneous nuclear ribonucleoprotein D-like 0.169
SON SON DNA binding protein 0.166
YTHDC1 YTH domain containing 1 0.160
HNRNPH2 heterogeneous nuclear ribonucleoprotein H2 (H') 0.152
ILF3 interleukin enhancer binding factor 3, 90kDa 0.151
BCLAF1 BCL2-associated transcription factor 1 0.148
SNRPF small nuclear ribonucleoprotein polypeptide F 0.145
SNIP1 Smad nuclear interacting protein 1 0.143
RBMX RNA binding motif protein, X-linked 0.141
TCERG1 transcription elongation regulator 1 0.133
FRA10AC1 fragile site, folic acid type, rare, fra(10)(q23.3) or fra(10)(q24.2) candidate 1 0.130
PRPF4B PRP4 pre-mRNA processing factor 4 homolog B (yeast) 0.127
PUF60 poly-U binding splicing factor 60KDa 0.124
SAP30BP SAP30 binding protein 0.122
HNRNPR heterogeneous nuclear ribonucleoprotein R 0.113
PTBP1 polypyrimidine tract binding protein 1 0.111
DHX15 DEAH (Asp-Glu-Ala-His) box polypeptide 15 0.111
SRSF5 serine/arginine-rich splicing factor 5 0.101
SREK1 splicing regulatory glutamine/lysine-rich protein 1 0.099
SNRNP200 small nuclear ribonucleoprotein 200kDa (U5) 0.098
DDX39B DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B 0.096
SNRPA1 small nuclear ribonucleoprotein polypeptide A' 0.091
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.087
DDX5 DEAD (Asp-Glu-Ala-Asp) box polypeptide 5 0.084
LSM3 LSM3 homolog, U6 small nuclear RNA associated (S. cerevisiae) 0.082
SF3B2 splicing factor 3b, subunit 2, 145kDa 0.078
ZNF830 zinc finger protein 830 0.074
PABPC1 poly(A) binding protein, cytoplasmic 1 0.073
SNW1 SNW domain containing 1 0.070
CLNS1A chloride channel, nucleotide-sensitive, 1A 0.067
ZCCHC10 zinc finger, CCHC domain containing 10 0.065
LUC7L2 LUC7-like 2 (S. cerevisiae) 0.063
MATR3 matrin 3 0.063
SNRPD3 small nuclear ribonucleoprotein D3 polypeptide 18kDa 0.063
SRPK1 SRSF protein kinase 1 0.061
DHX8 DEAH (Asp-Glu-Ala-His) box polypeptide 8 0.058
LSM7 LSM7 homolog, U6 small nuclear RNA associated (S. cerevisiae) 0.057
HNRNPD heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa) 0.055
SRRM2 serine/arginine repetitive matrix 2 0.055
THOC1 THO complex 1 0.054
SRRT serrate RNA effector molecule homolog (Arabidopsis) 0.053
YWHAG tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma polypeptide 0.052
SAFB2 scaffold attachment factor B2 0.052
PRPF40A PRP40 pre-mRNA processing factor 40 homolog A (S. cerevisiae) 0.051
RBFOX1 RNA binding protein, fox-1 homolog (C. elegans) 1 0.046
ZNF207 zinc finger protein 207 0.046
SNRPD1 small nuclear ribonucleoprotein D1 polypeptide 16kDa 0.045
FNBP4 formin binding protein 4 0.043
EIF4G2 eukaryotic translation initiation factor 4 gamma, 2 0.043
HNRNPUL1 heterogeneous nuclear ribonucleoprotein U-like 1 0.043
PRPF6 PRP6 pre-mRNA processing factor 6 homolog (S. cerevisiae) 0.042
BMI1 BMI1 polycomb ring finger oncogene 0.041
SAFB scaffold attachment factor B 0.040
SRSF9 serine/arginine-rich splicing factor 9 0.039
Loading network...
Mus musculus
Name Description Probability Func Analog Organism
Hnrpdl heterogeneous nuclear ribonucleoprotein D-like 0.987
Hnrnph1 heterogeneous nuclear ribonucleoprotein H1 0.979
Srsf7 serine/arginine-rich splicing factor 7 0.964
Srsf1 serine/arginine-rich splicing factor 1 0.960
Sfpq splicing factor proline/glutamine rich (polypyrimidine tract binding protein associated) 0.889
Luc7l2 LUC7-like 2 (S. cerevisiae) 0.887
Hnrnpa2b1 heterogeneous nuclear ribonucleoprotein A2/B1 0.771
Hnrnpa1 heterogeneous nuclear ribonucleoprotein A1 0.771
Hnrnpk heterogeneous nuclear ribonucleoprotein K 0.744
Pnn pinin 0.680
Srsf2 serine/arginine-rich splicing factor 2 0.646
Srsf6 serine/arginine-rich splicing factor 6 0.606
Hnrnpf heterogeneous nuclear ribonucleoprotein F 0.542
Hnrnpa3 heterogeneous nuclear ribonucleoprotein A3 0.529
Fubp1 far upstream element (FUSE) binding protein 1 0.501
Sf3b1 splicing factor 3b, subunit 1 0.437
Pabpn1 poly(A) binding protein, nuclear 1 0.385
Prpf38b PRP38 pre-mRNA processing factor 38 (yeast) domain containing B 0.373
Hnrnpd heterogeneous nuclear ribonucleoprotein D 0.343
Rnps1 ribonucleic acid binding protein S1 0.331
Ddx39b DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B 0.314
Srrt serrate RNA effector molecule homolog (Arabidopsis) 0.296
Srek1 splicing regulatory glutamine/lysine-rich protein 1 0.294
Hnrnpab heterogeneous nuclear ribonucleoprotein A/B 0.289
Hnrnpu heterogeneous nuclear ribonucleoprotein U 0.287
Srsf3 serine/arginine-rich splicing factor 3 0.284
Tardbp TAR DNA binding protein 0.278
Rbmxrt RNA binding motif protein, X chromosome retrogene 0.278
Ddx5 DEAD (Asp-Glu-Ala-Asp) box polypeptide 5 0.267
Dhx9 DEAH (Asp-Glu-Ala-His) box polypeptide 9 0.264
Rbm25 RNA binding motif protein 25 0.246
Srsf11 serine/arginine-rich splicing factor 11 0.237
Khdrbs1 KH domain containing, RNA binding, signal transduction associated 1 0.218
Ccnl1 cyclin L1 0.201
Nxf1 nuclear RNA export factor 1 homolog (S. cerevisiae) 0.164
Srsf5 serine/arginine-rich splicing factor 5 0.159
Magoh mago-nashi homolog, proliferation-associated (Drosophila) 0.158
Rbm8a RNA binding motif protein 8a 0.143
Snrnp40 small nuclear ribonucleoprotein 40 (U5) 0.139
Tra2b transformer 2 beta homolog (Drosophila) 0.139
Ctcf CCCTC-binding factor 0.109
Arglu1 arginine and glutamate rich 1 0.105
Fus fusion, derived from t(12;16) malignant liposarcoma (human) 0.104
Safb scaffold attachment factor B 0.103
Thoc2 THO complex 2 0.097
Nktr natural killer tumor recognition sequence 0.096
Zc3h11a zinc finger CCCH type containing 11A 0.093
2500003M10Rik RIKEN cDNA 2500003M10 gene 0.092
Anp32e acidic (leucine-rich) nuclear phosphoprotein 32 family, member E 0.090
Sltm SAFB-like, transcription modulator 0.088
Syncrip synaptotagmin binding, cytoplasmic RNA interacting protein 0.087
Hmgb1 high mobility group box 1 0.084
Hcfc1 host cell factor C1 0.083
Sfrs18 serine/arginine-rich splicing factor 18 0.082
Safb2 scaffold attachment factor B2 0.076
Luc7l3 LUC7-like 3 (S. cerevisiae) 0.075
Hnrnpm heterogeneous nuclear ribonucleoprotein M 0.072
Raver2 ribonucleoprotein, PTB-binding 2 0.072
Rbm14 RNA binding motif protein 14 0.072
Mat2a methionine adenosyltransferase II, alpha 0.070
Set SET nuclear oncogene 0.070
Eed embryonic ectoderm development 0.069
Srrm1 serine/arginine repetitive matrix 1 0.068
Hnrnph3 heterogeneous nuclear ribonucleoprotein H3 0.067
Srsf9 serine/arginine-rich splicing factor 9 0.066
Ddx3x DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 3, X-linked 0.065
Acin1 apoptotic chromatin condensation inducer 1 0.064
Ppp4c protein phosphatase 4, catalytic subunit 0.063
Tia1 cytotoxic granule-associated RNA binding protein 1 0.063
Zfp445 zinc finger protein 445 0.063
Luc7l Luc7 homolog (S. cerevisiae)-like 0.062
Akap8 A kinase (PRKA) anchor protein 8 0.062
Thoc4 THO complex 4 0.061
Sf3a3 splicing factor 3a, subunit 3 0.059
Pum1 pumilio 1 (Drosophila) 0.057
Elavl1 ELAV (embryonic lethal, abnormal vision, Drosophila)-like 1 (Hu antigen R) 0.056
Prpf39 PRP39 pre-mRNA processing factor 39 homolog (yeast) 0.054
Isg20l2 interferon stimulated exonuclease gene 20-like 2 0.053
H3f3b H3 histone, family 3B 0.051
Tdg thymine DNA glycosylase 0.044
Usp7 ubiquitin specific peptidase 7 0.043
Enoph1 enolase-phosphatase 1 0.043
Bclaf1 BCL2-associated transcription factor 1 0.042
Rbm39 RNA binding motif protein 39 0.041
Son Son DNA binding protein 0.040
Hnrnpa0 heterogeneous nuclear ribonucleoprotein A0 0.039
Fnbp4 formin binding protein 4 0.037
Ppp1r8 protein phosphatase 1, regulatory (inhibitor) subunit 8 0.035
Hnrnpr heterogeneous nuclear ribonucleoprotein R 0.035
Polr2d polymerase (RNA) II (DNA directed) polypeptide D 0.035
Mef2a myocyte enhancer factor 2A 0.033
Taok1 TAO kinase 1 0.033
Kdm1a lysine (K)-specific demethylase 1A 0.033
Raver1 ribonucleoprotein, PTB-binding 1 0.033
2310036O22Rik RIKEN cDNA 2310036O22 gene 0.032
Ash1l ash1 (absent, small, or homeotic)-like (Drosophila) 0.031
U2af1 U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) 1 0.031
Ylpm1 YLP motif containing 1 0.031
Fbxo32 F-box protein 32 0.031
Ccar1 cell division cycle and apoptosis regulator 1 0.030
Loading network...
Rattus norvegicus
Name Description Probability Func Analog Organism
Hnrph1 heterogeneous nuclear ribonucleoprotein H1 0.897
Rbmxrtl RNA binding motif protein, X chromosome retrogene-like 0.874
Ccnl1 cyclin L1 0.592
Sfrs2 splicing factor, arginine/serine-rich 2 0.585
Hnrnpf heterogeneous nuclear ribonucleoprotein F 0.550
Arf6 ADP-ribosylation factor 6 0.537
Sfrs1 splicing factor, arginine/serine-rich 1 0.503
Akap8 A kinase (PRKA) anchor protein 8 0.496
Hnrnpa1 heterogeneous nuclear ribonucleoprotein A1 0.488
Sf3a3 splicing factor 3a, subunit 3 0.436
Sfpq splicing factor proline/glutamine rich (polypyrimidine tract binding protein associated) 0.368
Sfrs3 splicing factor, arginine/serine-rich 3 0.367
H3f3b H3 histone, family 3B 0.345
Clk1 CDC-like kinase 1 0.340
Prpf39 PRP39 pre-mRNA processing factor 39 homolog (S. cerevisiae) 0.337
LOC686980 similar to arsenate resistance protein 2 0.333
Khdrbs1 KH domain containing, RNA binding, signal transduction associated 1 0.298
Eif4a3 eukaryotic translation initiation factor 4A, isoform 3 0.291
Ddx17 DEAD (Asp-Glu-Ala-Asp) box polypeptide 17 0.282
Tra2a transformer 2 alpha homolog (Drosophila) 0.280
Hnrnpab heterogeneous nuclear ribonucleoprotein A/B 0.264
Myh9 myosin, heavy chain 9, non-muscle 0.260
Rsrc2 arginine/serine-rich coiled-coil 2 0.253
Hnrpd heterogeneous nuclear ribonucleoprotein D 0.210
LOC681004 similar to GC-rich sequence DNA-binding factor homolog 0.206
Rnps1 ribonucleic acid binding protein S1 0.206
Trim28 tripartite motif-containing 28 0.205
Nup88 nucleoporin 88 0.187
Sfrs18 splicing factor, arginine/serine-rich 18 0.179
Ewsr1 Ewing sarcoma breakpoint region 1 0.172
Irf3 interferon regulatory factor 3 0.171
Hnrnpk heterogeneous nuclear ribonucleoprotein K 0.165
Anp32e acidic (leucine-rich) nuclear phosphoprotein 32 family, member E 0.164
Dmap1 DNA methyltransferase 1-associated protein 1 0.161
Tardbp TAR DNA binding protein 0.157
RGD1565775 similar to RIKEN cDNA 2810403A07 0.152
Magoh mago-nashi homolog, proliferation-associated (Drosophila) 0.146
Fus fusion (involved in t(12;16) in malignant liposarcoma) (human) 0.146
Sumo3 SMT3 suppressor of mif two 3 homolog 3 (S. cerevisiae) 0.140
Ppm1g protein phosphatase 1G (formerly 2C), magnesium-dependent, gamma isoform 0.136
Cand1 cullin-associated and neddylation-dissociated 1 0.130
Smad4 SMAD family member 4 0.126
Xab2 XPA binding protein 2 0.122
Sfrs5 splicing factor, arginine/serine-rich 5 0.122
Hnrnpa2b1 heterogeneous nuclear ribonucleoprotein A2/B1 0.122
Hnrnpu heterogeneous nuclear ribonucleoprotein U 0.117
Ncl nucleolin 0.116
Snrpb small nuclear ribonucleoprotein polypeptides B and B1 0.115
Bclaf1 BCL2-associated transcription factor 1 0.111
Nxf1 nuclear RNA export factor 1 0.110
Hnrpdl heterogeneous nuclear ribonucleoprotein D-like 0.109
Rbm39 RNA binding motif protein 39 0.109
Sfrs12 splicing factor, arginine/serine-rich 12 0.109
Nap1l5 nucleosome assembly protein 1-like 5 0.108
Ruvbl1 RuvB-like 1 (E. coli) 0.105
Serbp1 Serpine1 mRNA binding protein 1 0.104
Prmt1 protein arginine methyltransferase 1 0.104
Ddx5 DEAD (Asp-Glu-Ala-Asp) box polypeptide 5 0.102
Nolc1 nucleolar and coiled-body phosphoprotein 1 0.087
Sfrs6 splicing factor, arginine/serine-rich 6 0.083
Bcas2 breast carcinoma amplified sequence 2 0.083
Ik IK cytokine 0.078
Znf830 zinc finger protein 830 0.072
Wbp11 WW domain binding protein 11 0.071
Csnk1a1 casein kinase 1, alpha 1 0.071
Hnrnph3 heterogeneous nuclear ribonucleoprotein H3 (2H9) 0.068
Cct7 chaperonin containing Tcp1, subunit 7 (eta) 0.067
Tra2b transformer 2 beta homolog (Drosophila) 0.067
Sf3b1 splicing factor 3b, subunit 1 0.059
Ssrp1 structure specific recognition protein 1 0.058
Plrg1 pleiotropic regulator 1, PRL1 homolog (Arabidopsis) 0.057
Gnl3 guanine nucleotide binding protein-like 3 (nucleolar) 0.057
Snrnp70 small nuclear ribonucleoprotein 70 (U1) 0.056
Kpnb1 karyopherin (importin) beta 1 0.056
Prpf38b PRP38 pre-mRNA processing factor 38 (yeast) domain containing B 0.054
Bud31 BUD31 homolog (S. cerevisiae) 0.051
Ilf2 interleukin enhancer binding factor 2 0.051
LOC687711 similar to small nuclear ribonucleoprotein D3 0.050
Luc7l LUC7-like (S. cerevisiae) 0.048
Taf1d TATA box binding protein (Tbp)-associated factor, RNA polymerase I, D 0.047
Fnbp4 formin binding protein 4 0.047
Snap91 synaptosomal-associated protein 91 0.046
Smc1a structural maintenance of chromosomes 1A 0.045
Mark3 MAP/microtubule affinity-regulating kinase 3 0.044
Luc7l3 LUC7-like 3 (S. cerevisiae) 0.043
LOC100360986 mCG1035404-like 0.043
Ube2b ubiquitin-conjugating enzyme E2B (RAD6 homolog, S. cerevisiae) 0.043
Hnrnpa3 heterogeneous nuclear ribonucleoprotein A3 0.042
Sept6 septin 6 0.042
Tial1 Tia1 cytotoxic granule-associated RNA binding protein-like 1 0.041
Mrps31 mitochondrial ribosomal protein S31 0.041
Sp4 Sp4 transcription factor 0.041
Cnbp CCHC-type zinc finger, nucleic acid binding protein 0.041
Papola poly (A) polymerase alpha 0.040
RGD1359529 similar to chromosome 1 open reading frame 63 0.039
Paf1 Paf1, RNA polymerase II associated factor, homolog (S. cerevisiae) 0.039
Rps6kb1 ribosomal protein S6 kinase, polypeptide 1 0.039
Fbl fibrillarin 0.038
Vasp vasodilator-stimulated phosphoprotein 0.038
Ccdc117 coiled-coil domain containing 117 0.038
Loading network...
Saccharomyces cerevisiae
Name Description Probability Func Analog Organism