IMP

Process View

Saccharomyces cerevisiae

63 genes annotated in yeast

nucleosome organization

A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of one or more nucleosomes.

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In addition to gene-name show these genes:

Known genes in the process in yeast Include functional analogs

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Gene Predictions

Click on a gene's description to view its network relationships with genes known to be involved in "nucleosome organization"

Show only novel predictions Show only unknown genes Highlight genes with functional analogs involved in "nucleosome organization" (in gray)

Name	Description	Probability	Func Analog Organism
HHT1	Hht1p	1.000	Human
RSC8	Rsc8p	1.000
ARP4	Arp4p	1.000
RSC4	Rsc4p	0.999
HHF1	Hhf1p	0.999	Human Fly
NPL6	Npl6p	0.999
ARP9	Arp9p	0.998
STH1	Sth1p	0.998
RSC2	Rsc2p	0.998
SWR1	Swr1p	0.995
BDF1	Bdf1p	0.994
RSC6	Rsc6p	0.993
RSC9	Rsc9p	0.989
ISW1	Isw1p	0.980
ASF1	Asf1p	0.975
RSC3	Rsc3p	0.973
RSC58	Rsc58p	0.973
ARP7	Arp7p	0.967
HTZ1	Htz1p	0.942
HIR2	Hir2p	0.939
HHT2	Hht2p	0.937	Human
RTT106	Rtt106p	0.923
ARP8	Arp8p	0.901
RLF2	Rlf2p	0.897
YTA7	Yta7p	0.889
HIR1	Hir1p	0.882
RSC1	Rsc1p	0.840
CAC2	Cac2p	0.827
SFH1	Sfh1p	0.826
RVB2	Rvb2p	0.824
HHF2	Hhf2p	0.816	Human Fly
NHP10	Nhp10p	0.780
YAF9	Yaf9p	0.743
RTT102	Rtt102p	0.689
SWC3	Swc3p	0.685
EPL1	Epl1p	0.663
HTB2	Htb2p	0.628
INO80	Ino80p	0.602
HIF1	Hif1p	0.602
SWI1	Swi1p	0.601
HPC2	Hpc2p	0.581
RCO1	Rco1p	0.557
IES4	Ies4p	0.549
SPT15	Spt15p	0.548
GCN5	Gcn5p	0.530
HHO1	Hho1p	0.526	Mouse
NHP6A	Nhp6ap	0.516
HAT2	Hat2p	0.512	Human Yeast Fly
SWC4	Swc4p	0.498
SWI3	Swi3p	0.495
RVB1	Rvb1p	0.487
HTL1	Htl1p	0.453
SWC5	Swc5p	0.440
SPT10	Spt10p	0.356
LEO1	Leo1p	0.313
RSC30	Rsc30p	0.310
MSI1	Msi1p	0.309
IES3	Ies3p	0.302
IES2	Ies2p	0.301
MOT1	Mot1p	0.284
NUP170	Nup170p	0.269
HTA2	Hta2p	0.254	Human
HTB1	Htb1p	0.253
RAD16	Rad16p	0.241
RTT109	Rtt109p	0.239
HTA1	Hta1p	0.223	Human
HIR3	Hir3p	0.196
SPT16	Spt16p	0.190
YNG1	Yng1p	0.181
SWC7	Swc7p	0.180
VPS71	Vps71p	0.156
IES5	Ies5p	0.144
ISW2	Isw2p	0.144
VPS72	Vps72p	0.143
HAT1	Hat1p	0.137	Human
ESF1	Esf1p	0.120
SET2	Set2p	0.119
ARP5	Arp5p	0.117
ARP6	Arp6p	0.117
ORC4	Orc4p	0.114
CKB2	Ckb2p	0.111
IES6	Ies6p	0.108
HDA1	Hda1p	0.108
ITC1	Itc1p	0.104
BDF2	Bdf2p	0.098	Yeast
PSH1	Psh1p	0.093
REB1	Reb1p	0.089
TAF5	Taf5p	0.089
ACT1	Act1p	0.076
UME1	Ume1p	0.075
ORC3	Orc3p	0.074
IES1	Ies1p	0.073
SIN3	Sin3p	0.072
EAF1	Eaf1p	0.071
CHD1	Chd1p	0.070
RPD3	Rpd3p	0.066
SAS2	Sas2p	0.064
RAP1	Rap1p	0.062
RTG2	Rtg2p	0.062
HOS2	Hos2p	0.059
SSO2	Sso2p	0.059
MDN1	Mdn1p	0.058
POB3	Pob3p	0.058
CKA1	Cka1p	0.057
VPS75	Vps75p	0.057
IOC2	Ioc2p	0.055
SNF11	Snf11p	0.054
VIP1	Vip1p	0.052
SPT6	Spt6p	0.049
YIR035C	hypothetical protein	0.045
PRS2	Prs2p	0.045
SET3	Set3p	0.045
SPT21	Spt21p	0.043
TEC1	Tec1p	0.042
RAD59	Rad59p	0.042
MCX1	Mcx1p	0.041
EAF5	Eaf5p	0.039
TIF4632	Tif4632p	0.039
SPT8	Spt8p	0.039
TMA64	Tma64p	0.039
TRI1	Tri1p	0.038
HAL5	Hal5p	0.038
SFL1	Sfl1p	0.038
SVL3	Svl3p	0.038
KAP104	Kap104p	0.038
PCL9	Pcl9p	0.037
SRD1	Srd1p	0.037
YLR264C-A	hypothetical protein	0.036
MCM6	Mcm6p	0.035
PSY4	Psy4p	0.034
GLT1	Glt1p	0.034
YIL151C	hypothetical protein	0.034
IOC3	Ioc3p	0.033
MCM3	Mcm3p	0.033
TRA1	Tra1p	0.033	Fly
CRP1	Crp1p	0.032
IKI1	Iki1p	0.032
SNF5	Snf5p	0.031	Human
ESA1	Esa1p	0.031	Yeast
URA3	Ura3p	0.030
LEU2	Leu2p	0.030
YOL038C-A	hypothetical protein	0.030
SCT1	Sct1p	0.030
SAS5	Sas5p	0.029
SKO1	Sko1p	0.029
TAF6	Taf6p	0.029
HO	Hop	0.029
YLR162W	hypothetical protein	0.029
SAS4	Sas4p	0.028
MNN2	Mnn2p	0.028
BUD27	Bud27p	0.028
HXT3	Hxt3p	0.028
YNL234W	hypothetical protein	0.028
MER1	Mer1p	0.027
CHA1	Cha1p	0.027
TAF9	Taf9p	0.027
FAA3	Faa3p	0.027
PTR2	Ptr2p	0.026
SEC16	Sec16p	0.026
RRN5	Rrn5p	0.026
TAF7	Taf7p	0.026
RTF1	Rtf1p	0.025
YPR157W	hypothetical protein	0.025
YAR068W	hypothetical protein	0.025
SPT5	Spt5p	0.025
CTI6	Cti6p	0.025
ZPS1	Zps1p	0.025
RIF1	Rif1p	0.025
DCC1	Dcc1p	0.025
YHB1	Yhb1p	0.025
SUT1	Sut1p	0.024
TIM50	Tim50p	0.024
ELP4	Elp4p	0.024
CKB1	Ckb1p	0.024
YLR042C	hypothetical protein	0.024
NUP49	Nup49p	0.024
ATP6	Atp6p	0.024
MIG1	Mig1p	0.024
NGG1	Ngg1p	0.024
SPL2	Spl2p	0.023
SPT2	Spt2p	0.023
PCL2	Pcl2p	0.023
CAF40	Caf40p	0.023
PUS9	Pus9p	0.023
TMA22	Tma22p	0.023
KEL1	Kel1p	0.023
IST2	Ist2p	0.023
YBR013C	hypothetical protein	0.023
IML1	Iml1p	0.023
GCN20	Gcn20p	0.022
SWD1	Swd1p	0.022
MOT3	Mot3p	0.022
SEC7	Sec7p	0.022
CNE1	Cne1p	0.022
YOL013W-A	hypothetical protein	0.022
HPF1	Hpf1p	0.022
DSS4	Dss4p	0.022
YLR363W-A	hypothetical protein	0.021
SOR2	Sor2p	0.021
CUP1-1	Cup1-1p	0.021
ARG8	Arg8p	0.021
MCM5	Mcm5p	0.021
NGL2	Ngl2p	0.021
RRP17	Rrp17p	0.021
PBY1	Pby1p	0.021
DLS1	Dls1p	0.020
MF(ALPHA)2	Mf(alpha)2p	0.020
SEC20	Sec20p	0.020
DUR1,2	Dur1,2p	0.020
AUA1	Aua1p	0.020
TAF12	Taf12p	0.020
BTT1	Btt1p	0.020
CTR9	Ctr9p	0.020
REV1	Rev1p	0.020
CPD1	Cpd1p	0.020
ALT2	Alt2p	0.020
MTC1	Mtc1p	0.020
HOS3	Hos3p	0.019
ORC6	Orc6p	0.019
GBP2	Gbp2p	0.019
MAP2	Map2p	0.019
YLR040C	hypothetical protein	0.019
REE1	Ree1p	0.019
TYE7	Tye7p	0.019
GPD2	Gpd2p	0.019
SRX1	Srx1p	0.019
SIR3	Sir3p	0.019
YKR075C	hypothetical protein	0.019
BSC1	Bsc1p	0.019
ORC1	Orc1p	0.019
OPT2	Opt2p	0.019
ARP10	Arp10p	0.019
FMT1	Fmt1p	0.019
YAL037C-A	hypothetical protein	0.019
ARO10	Aro10p	0.018
ICS2	Ics2p	0.018
SCM4	Scm4p	0.018
DIC1	Dic1p	0.018
TIR3	Tir3p	0.018
BIO3	Bio3p	0.018
NOP10	Nop10p	0.018
BNA4	Bna4p	0.018
YCF1	Ycf1p	0.018
YPL068C	hypothetical protein	0.018
YPL199C	hypothetical protein	0.018
SRP54	Srp54p	0.018
POP2	Pop2p	0.018
UPS3	Ups3p	0.018
PHD1	Phd1p	0.018
NTO1	Nto1p	0.018
SCY1	Scy1p	0.018
YNL058C	hypothetical protein	0.017
SPS4	Sps4p	0.017
FKH1	Fkh1p	0.017
SAS3	Sas3p	0.017	Yeast
YAL064W	hypothetical protein	0.017
YPR096C	hypothetical protein	0.017
YGL006W-A	hypothetical protein	0.017
RNP1	Rnp1p	0.017
VBA5	Vba5p	0.017
YLR412C-A	hypothetical protein	0.017
COS12	Cos12p	0.017
NRG2	Nrg2p	0.017
YLR422W	hypothetical protein	0.017
YMR086W	hypothetical protein	0.017
LCL1	Lcl1p	0.017
MAG2	Mag2p	0.016
YJR154W	hypothetical protein	0.016
RPL15B	Rpl15bp	0.016
NSE4	Nse4p	0.016
WSC4	Wsc4p	0.016
YJL160C	hypothetical protein	0.016
YPL067C	hypothetical protein	0.016
YDR222W	hypothetical protein	0.016
MF(ALPHA)1	Mf(alpha)1p	0.016
PAR32	Par32p	0.016
TAD3	Tad3p	0.016
PHM6	Phm6p	0.016
YJR120W	hypothetical protein	0.016
MAK10	Mak10p	0.016
GPX2	Gpx2p	0.016
YDR034C-A	hypothetical protein	0.016
MKT1	Mkt1p	0.016
YML003W	hypothetical protein	0.016
ISU2	Isu2p	0.016
YBL029W	hypothetical protein	0.016
TRK1	Trk1p	0.016
NIS1	Nis1p	0.016
IZH4	Izh4p	0.016
USO1	Uso1p	0.016
YMR295C	hypothetical protein	0.016
GLN1	Gln1p	0.016
GAL80	Gal80p	0.016
MET8	Met8p	0.016
YNL033W	hypothetical protein	0.016
YOR012W	hypothetical protein	0.016
YOL014W	hypothetical protein	0.016
YGR035C	hypothetical protein	0.016
YAR029W	hypothetical protein	0.016
YAR066W	hypothetical protein	0.016
YER130C	hypothetical protein	0.016
SRO77	Sro77p	0.016
YKR045C	hypothetical protein	0.015
YCR015C	hypothetical protein	0.015
YGL235W	hypothetical protein	0.015
ENA5	Ena5p	0.015
PRM4	Prm4p	0.015
YLR460C	hypothetical protein	0.015
RNH70	Rnh70p	0.015
SAM3	Sam3p	0.015
SEN54	Sen54p	0.015
PCT1	Pct1p	0.015
UAF30	Uaf30p	0.015
ERV2	Erv2p	0.015
YNL067W-B	hypothetical protein	0.015
HDA2	Hda2p	0.015
PDC5	Pdc5p	0.015
MUM3	Mum3p	0.015
LRO1	Lro1p	0.015
KEM1	Kem1p	0.015
YER186C	hypothetical protein	0.015
YNL162W-A	hypothetical protein	0.015
MTR10	Mtr10p	0.015
SRM1	Srm1p	0.015
BDS1	Bds1p	0.015
ARR2	Arr2p	0.015
YDL012C	hypothetical protein	0.015
MPT5	Mpt5p	0.015
LDB7	Ldb7p	0.015
RGD2	Rgd2p	0.015
YBR074W	hypothetical protein	0.015
CIT2	Cit2p	0.015
HSF1	Hsf1p	0.015
SIS2	Sis2p	0.014
SNF6	Snf6p	0.014
PTI1	Pti1p	0.014
YGR126W	hypothetical protein	0.014
YOR387C	hypothetical protein	0.014
IOC4	Ioc4p	0.014
YPR027C	hypothetical protein	0.014
SCP1	Scp1p	0.014
TIP1	Tip1p	0.014
RIB2	Rib2p	0.014
YDL085C-A	hypothetical protein	0.014
MIG2	Mig2p	0.014
CAF130	Caf130p	0.014
SIT1	Sit1p	0.014
ELP6	Elp6p	0.014
RGT1	Rgt1p	0.014
GON7	Gon7p	0.014
FRE4	Fre4p	0.014
ENB1	Enb1p	0.014
YJL213W	hypothetical protein	0.014
MNN1	Mnn1p	0.014
YDR239C	hypothetical protein	0.014
YLR108C	hypothetical protein	0.014
AQY2	Aqy2p	0.014
FAS2	Fas2p	0.014
ATM1	Atm1p	0.014
YPL216W	hypothetical protein	0.014
OPI1	Opi1p	0.014
DOG1	Dog1p	0.014
ICL1	Icl1p	0.014
YLR072W	hypothetical protein	0.014
MOT2	Mot2p	0.014
YJL181W	hypothetical protein	0.014
SPN1	Spn1p	0.014
YOR022C	hypothetical protein	0.014
RKM3	Rkm3p	0.014
ECM22	Ecm22p	0.014
YNR062C	hypothetical protein	0.014
IXR1	Ixr1p	0.014
YMR317W	hypothetical protein	0.014
YEL043W	hypothetical protein	0.014
YLR278C	hypothetical protein	0.014
YLR342W-A	hypothetical protein	0.014
CAB4	Cab4p	0.013
YLR143W	hypothetical protein	0.013
YPL014W	hypothetical protein	0.013
APT2	Apt2p	0.013
SET1	Set1p	0.013
YSR3	Ysr3p	0.013
SRT1	Srt1p	0.013
YCL001W-B	hypothetical protein	0.013
YBL044W	hypothetical protein	0.013
YKR041W	hypothetical protein	0.013
STE6	Ste6p	0.013
YLR281C	hypothetical protein	0.013
HEM13	Hem13p	0.013
YHK8	Yhk8p	0.013
HST3	Hst3p	0.013
YFR035C	hypothetical protein	0.013
RTC5	Rtc5p	0.013
HOR2	Hor2p	0.013
DBP10	Dbp10p	0.013
FCY22	Fcy22p	0.013
ARK1	Ark1p	0.013
RFC3	Rfc3p	0.013
YNL018C	hypothetical protein	0.013
YMR122W-A	hypothetical protein	0.013
YOR385W	hypothetical protein	0.013
RAD14	Rad14p	0.013
PIN4	Pin4p	0.013
YKL106C-A	hypothetical protein	0.013
APL5	Apl5p	0.013
CAK1	Cak1p	0.013
HEM3	Hem3p	0.013
MFA2	Mfa2p	0.013
BIO5	Bio5p	0.013
ABP140	Abp140p	0.013
PCM1	Pcm1p	0.013
YEA6	Yea6p	0.013
HMRA1	Hmra1p	0.013
YPR159C-A	hypothetical protein	0.013
TSC3	Tsc3p	0.013
YKL070W	hypothetical protein	0.013
FRE5	Fre5p	0.013
ATO3	Ato3p	0.013
IMA5	Ima5p	0.013
YJL218W	hypothetical protein	0.013
AAD15	Aad15p	0.013
AAD6	Aad6p	0.013
YML100W-A	hypothetical protein	0.013
APN2	Apn2p	0.013
MMP1	Mmp1p	0.013
BI4	Bi4p	0.013
PDC6	Pdc6p	0.013
YER175W-A	hypothetical protein	0.013
ICS3	Ics3p	0.013
FAA2	Faa2p	0.013
RRT5	Rrt5p	0.013
YIR042C	hypothetical protein	0.013
BFR1	Bfr1p	0.013
ISR1	Isr1p	0.013
QDR2	Qdr2p	0.013
OSH3	Osh3p	0.013
YML053C	hypothetical protein	0.012
YLR126C	hypothetical protein	0.012
PHO87	Pho87p	0.012
YDL144C	hypothetical protein	0.012
PZF1	Pzf1p	0.012
YPR097W	hypothetical protein	0.012
FET4	Fet4p	0.012
YBR219C	hypothetical protein	0.012
KRE29	Kre29p	0.012
TAF4	Taf4p	0.012
FUN30	Fun30p	0.012
FCY21	Fcy21p	0.012
YPL150W	hypothetical protein	0.012
ZRT2	Zrt2p	0.012
VEL1	Vel1p	0.012
SGE1	Sge1p	0.012
ALE1	Ale1p	0.012
GCV2	Gcv2p	0.012
YCR050C	hypothetical protein	0.012
OPT1	Opt1p	0.012
YOR268C	hypothetical protein	0.012
YAL037W	hypothetical protein	0.012
FIT2	Fit2p	0.012
YNL034W	hypothetical protein	0.012
MRN1	Mrn1p	0.012
RFC1	Rfc1p	0.012
RMD6	Rmd6p	0.012
YCH1	Ych1p	0.012
KSH1	Ksh1p	0.012
YKL068W-A	hypothetical protein	0.012
INM1	Inm1p	0.012
YDR182W-A	hypothetical protein	0.012
DCG1	Dcg1p	0.012
MNN5	Mnn5p	0.012
NUP157	Nup157p	0.012
PIH1	Pih1p	0.012
YER064C	hypothetical protein	0.012
DAS2	Das2p	0.012
YOL086W-A	hypothetical protein	0.012
PHO12	Pho12p	0.012
YEL007W	hypothetical protein	0.012
YJL028W	hypothetical protein	0.012
PRY3	Pry3p	0.012
KNH1	Knh1p	0.012
VTC2	Vtc2p	0.012
DIF1	Dif1p	0.012
CTS1	Cts1p	0.012
TIS11	Tis11p	0.012
ECM3	Ecm3p	0.012
YMR001C-A	hypothetical protein	0.012
FRE3	Fre3p	0.012
AAP1	Aap1p	0.012
YLR406C-A	hypothetical protein	0.012
YNL217W	hypothetical protein	0.012
YKL023W	hypothetical protein	0.012
RSB1	Rsb1p	0.012
YOL097W-A	hypothetical protein	0.012
YNL097C-B	hypothetical protein	0.012
YNR063W	hypothetical protein	0.012
YLL053C	hypothetical protein	0.012
SWP82	Swp82p	0.011
SPO74	Spo74p	0.011
CTR3	Ctr3p	0.011
YJL107C	hypothetical protein	0.011
BAT2	Bat2p	0.011
CNA1	Cna1p	0.011
SET4	Set4p	0.011
YDR524W-C	hypothetical protein	0.011
MFA1	Mfa1p	0.011
YHR177W	hypothetical protein	0.011
NHP6B	Nhp6bp	0.011
YNL146C-A	hypothetical protein	0.011
CAM1	Cam1p	0.011
RAM2	Ram2p	0.011
IKI3	Iki3p	0.011
DBF4	Dbf4p	0.011
YER187W	hypothetical protein	0.011
BIO4	Bio4p	0.011
YCR102C	hypothetical protein	0.011
YPL168W	hypothetical protein	0.011
ADH2	Adh2p	0.011
ZRT1	Zrt1p	0.011
YHR033W	hypothetical protein	0.011
TOP2	Top2p	0.011
IMA2	Ima2p	0.011
PRI1	Pri1p	0.011
STE23	Ste23p	0.011
TAH1	Tah1p	0.011
YFL034W	hypothetical protein	0.011
ARO9	Aro9p	0.011
NHA1	Nha1p	0.011
YSF3	Ysf3p	0.011
NPY1	Npy1p	0.011
HLJ1	Hlj1p	0.011
TIR1	Tir1p	0.011
MGS1	Mgs1p	0.011
ECM5	Ecm5p	0.011
MRC1	Mrc1p	0.011
YIL046W-A	hypothetical protein	0.011
PTP3	Ptp3p	0.011
TOM71	Tom71p	0.011
YER085C	hypothetical protein	0.011
SCD6	Scd6p	0.011
SSP1	Ssp1p	0.011
YMR130W	hypothetical protein	0.011
CAB2	Cab2p	0.011
NBA1	Nba1p	0.011
RSN1	Rsn1p	0.011
YPL152W-A	hypothetical protein	0.011
AIF1	Aif1p	0.011
YLR137W	hypothetical protein	0.011
YMR244W	hypothetical protein	0.011
YLR307C-A	hypothetical protein	0.011
SEO1	Seo1p	0.011
YLR012C	hypothetical protein	0.011
MPH3	Mph3p	0.011
YML007C-A	hypothetical protein	0.011
YJL047C-A	hypothetical protein	0.011
NTA1	Nta1p	0.011
KAP123	Kap123p	0.011	Human
PKH3	Pkh3p	0.011
SPO77	Spo77p	0.011
ECM14	Ecm14p	0.011
TCA17	Tca17p	0.011
YPL260W	hypothetical protein	0.011
SNF2	Snf2p	0.011
SPR6	Spr6p	0.011
RNH201	Rnh201p	0.011
SKS1	Sks1p	0.011
SKG3	Skg3p	0.011
UTR4	Utr4p	0.011
RTT105	Rtt105p	0.010
MDL2	Mdl2p	0.010
PIR1	Pir1p	0.010
TAF2	Taf2p	0.010
YOR316C-A	hypothetical protein	0.010
SSK22	Ssk22p	0.010
YHR192W	hypothetical protein	0.010
YNL035C	hypothetical protein	0.010
MRH1	Mrh1p	0.010
YOR378W	hypothetical protein	0.010
YPR108W-A	hypothetical protein	0.010
YGL015C	hypothetical protein	0.010
YBL039W-B	hypothetical protein	0.010
OLI1	F0-ATP synthase subunit c (ATPase-associated proteolipid), encoded on the mitochondrial genome; mutation confers oligomycin resistance; expression is specifically dependent on the nuclear genes AEP1 and AEP2	0.010
SAG1	Sag1p	0.010
ROX1	Rox1p	0.010
RIM2	Rim2p	0.010
SFB3	Sfb3p	0.010
PHO3	Pho3p	0.010
HXT8	Hxt8p	0.010
YDR089W	hypothetical protein	0.010
EKI1	Eki1p	0.010
EDC1	Edc1p	0.010
YGR169C-A	hypothetical protein	0.010
EAP1	Eap1p	0.010
STE2	Ste2p	0.010
TMN3	Tmn3p	0.010
SWI5	Swi5p	0.010
YIR021W-A	hypothetical protein	0.010
YKL018C-A	hypothetical protein	0.010
RMA1	Rma1p	0.010
URA2	Ura2p	0.010
YPR036W-A	hypothetical protein	0.010
YOR338W	hypothetical protein	0.010
FRE7	Fre7p	0.010
YFL051C	hypothetical protein	0.010
TAF10	Taf10p	0.010
FUI1	Fui1p	0.010
YHR035W	hypothetical protein	0.010
YPL272C	hypothetical protein	0.010