The network for 'regulation of nuclear transcribed mrna poly a tail shortening' in your query organism is displayed on the left, if relationships are supported by the integrated data. Moving any of the genes in that network will simultaneously update the homologs in the networks displayed to the right (if they exist). Additionally, hovering over any nodes will highlight the identified functionally similar homologs in the other networks. Last, the bar above the networks allows you to remove/add additional organisms. Simily drag and drop the organism names in the desired order.

Multiple Organisms

regulation of nuclear transcribed mrna poly a tail shortening

Any process that modulates the frequency, rate or extent of poly(A) tail shortening of a nuclear-transcribed mRNA. Poly(A) tail shortening is the decrease in length of the poly(A) tail of an mRNA from full length to an oligo(A) length.

Homo sapiens
Name Description Probability Func Analog Organism
TOB1 transducer of ERBB2, 1 1.000
TNRC6A trinucleotide repeat containing 6A 0.999
EIF2C1 eukaryotic translation initiation factor 2C, 1 0.998
BTG1 B-cell translocation gene 1, anti-proliferative 0.991
PABPC1 poly(A) binding protein, cytoplasmic 1 0.981
TNRC6C trinucleotide repeat containing 6C 0.965
CNOT8 CCR4-NOT transcription complex, subunit 8 0.939
EIF2C2 eukaryotic translation initiation factor 2C, 2 0.877
EIF2C4 eukaryotic translation initiation factor 2C, 4 0.869
CNOT7 CCR4-NOT transcription complex, subunit 7 0.813
TNRC6B trinucleotide repeat containing 6B 0.781
DICER1 dicer 1, ribonuclease type III 0.745
PCBP2 poly(rC) binding protein 2 0.708
CNOT1 CCR4-NOT transcription complex, subunit 1 0.690
EIF2C3 eukaryotic translation initiation factor 2C, 3 0.631
NOXA1 NADPH oxidase activator 1 0.508
PAN3 PAN3 poly(A) specific ribonuclease subunit homolog (S. cerevisiae) 0.364
BTG2 BTG family, member 2 0.354
CNOT6 CCR4-NOT transcription complex, subunit 6 0.323
CNOT6L CCR4-NOT transcription complex, subunit 6-like 0.316
YBX1 Y box binding protein 1 0.157
FOS FBJ murine osteosarcoma viral oncogene homolog 0.128
IPO8 importin 8 0.125
JUNB jun B proto-oncogene 0.116
CPEB4 cytoplasmic polyadenylation element binding protein 4 0.047
DUSP1 dual specificity phosphatase 1 0.037
CNOT2 CCR4-NOT transcription complex, subunit 2 0.034
PRKCZ protein kinase C, zeta 0.027
IER2 immediate early response 2 0.025
CPEB3 cytoplasmic polyadenylation element binding protein 3 0.024
PARD6A par-6 partitioning defective 6 homolog alpha (C. elegans) 0.024
PARD3 par-3 partitioning defective 3 homolog (C. elegans) 0.022
FYN FYN oncogene related to SRC, FGR, YES 0.022
PNRC1 proline-rich nuclear receptor coactivator 1 0.021
NR4A2 nuclear receptor subfamily 4, group A, member 2 0.021
FOSB FBJ murine osteosarcoma viral oncogene homolog B 0.021
PARD6B par-6 partitioning defective 6 homolog beta (C. elegans) 0.021
ZFP36 zinc finger protein 36, C3H type, homolog (mouse) 0.019
CEBPD CCAAT/enhancer binding protein (C/EBP), delta 0.018
KLF6 Kruppel-like factor 6 0.016
NCF1 neutrophil cytosolic factor 1 0.014
CDCP1 CUB domain containing protein 1 0.013
PAIP2 poly(A) binding protein interacting protein 2 0.012
RAF1 v-raf-1 murine leukemia viral oncogene homolog 1 0.011
MAPK14 mitogen-activated protein kinase 14 0.011
MAPKAPK2 mitogen-activated protein kinase-activated protein kinase 2 0.011
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Caenorhabditis elegans
Name Description Probability Func Analog Organism
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Danio rerio
Name Description Probability Func Analog Organism
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Drosophila melanogaster
Name Description Probability Func Analog Organism
spn-E spindle E 0.442
stwl stonewall 0.407
Mnt CG13316 gene product from transcript CG13316-RD 0.269
heph hephaestus 0.217
CycG Cyclin G 0.127
rhi rhino 0.112
CG8443 CG8443 gene product from transcript CG8443-RA 0.100
Dad Daughters against dpp 0.088
Pk61C Protein kinase 61C 0.086
S6k RPS6-p70-protein kinase 0.074
aub aubergine 0.061
wun wunen 0.052
piwi CG6122 gene product from transcript CG6122-RA 0.045
HLH106 Helix loop helix protein 106 0.042
mael maelstrom 0.036
RhoGAP68F CG6811 gene product from transcript CG6811-RA 0.036
zpg zero population growth 0.034
armi armitage 0.033
Nipped-B CG17704 gene product from transcript CG17704-RI 0.031
wisp wispy 0.030
mus309 mutagen-sensitive 309 0.030
Patr-1 Protein associated with topo II related - 1 0.028
CG4771 CG4771 gene product from transcript CG4771-RA 0.026
Cul-3 Cullin-3 0.026
Mad Mothers against dpp 0.022
Hip14 Huntingtin-interacting protein 14 0.022
spn-D spindle D 0.022
InR Insulin-like receptor 0.021
sw short wing 0.021
Fs(2)Ket Female sterile (2) Ketel 0.019
CkIalpha Casein kinase Ialpha 0.018
tws twins 0.017
CG9925 CG9925 gene product from transcript CG9925-RA 0.017
bam bag of marbles 0.016
Hr39 Hormone receptor-like in 39 0.016
Psa Puromycin sensitive aminopeptidase 0.016
vas vasa 0.016
krimp krimper 0.015
CG4699 CG4699 gene product from transcript CG4699-RJ 0.014
CG9238 CG9238 gene product from transcript CG9238-RA 0.014
pie pineapple eye 0.013
Npc1b Niemann-Pick type C-1b 0.013
Dlic Dynein light intermediate chain 0.012
scny scrawny 0.011
SAK Sak kinase 0.011
PRL-1 CG4993 gene product from transcript CG4993-RB 0.011
Smr Smrter 0.010
RYBP Ring and YY1 Binding Protein 0.010
ns2 nucleostemin 2 0.010
l(1)G0289 lethal (1) G0289 0.010
Hcf Host cell factor 0.010
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Mus musculus
Name Description Probability Func Analog Organism
Fos FBJ osteosarcoma oncogene 0.929
Ddx6 DEAD (Asp-Glu-Ala-Asp) box polypeptide 6 0.606
Eif2c2 eukaryotic translation initiation factor 2C, 2 0.510
Dusp1 dual specificity phosphatase 1 0.460
Junb Jun-B oncogene 0.379
Neurl1a neuralized homolog 1A (Drosophila) 0.339
Ier2 immediate early response 2 0.242
Brd4 bromodomain containing 4 0.178
Tnrc6b trinucleotide repeat containing 6b 0.162
Egr1 early growth response 1 0.119
Nr4a1 nuclear receptor subfamily 4, group A, member 1 0.116
Btg2 B-cell translocation gene 2, anti-proliferative 0.111
Bcl2l11 BCL2-like 11 (apoptosis facilitator) 0.109
Nfkbia nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha 0.101
Trim32 tripartite motif-containing 32 0.098
Pard3 par-3 (partitioning defective 3) homolog (C. elegans) 0.098
Mafk v-maf musculoaponeurotic fibrosarcoma oncogene family, protein K (avian) 0.098
Jun Jun oncogene 0.092
Btg1 B-cell translocation gene 1, anti-proliferative 0.092
Klf6 Kruppel-like factor 6 0.084
Mll3 myeloid/lymphoid or mixed-lineage leukemia 3 0.083
Gsk3b glycogen synthase kinase 3 beta 0.079
Hsp90aa1 heat shock protein 90, alpha (cytosolic), class A member 1 0.076
Fas Fas (TNF receptor superfamily member 6) 0.074
Irs2 insulin receptor substrate 2 0.066
Ldb3 LIM domain binding 3 0.066
Prkce protein kinase C, epsilon 0.066
Vhl von Hippel-Lindau tumor suppressor 0.058
Cd28 CD28 antigen 0.052
Zfp36 zinc finger protein 36 0.052
Tnfrsf13b tumor necrosis factor receptor superfamily, member 13b 0.050
Crim1 cysteine rich transmembrane BMP regulator 1 (chordin like) 0.047
Cebpb CCAAT/enhancer binding protein (C/EBP), beta 0.045
Klf7 Kruppel-like factor 7 (ubiquitous) 0.040
Mll5 myeloid/lymphoid or mixed-lineage leukemia 5 0.039
Vegfa vascular endothelial growth factor A 0.039
Csrnp1 cysteine-serine-rich nuclear protein 1 0.037
Ncoa1 nuclear receptor coactivator 1 0.035
Bcl2 B-cell leukemia/lymphoma 2 0.035
Klf4 Kruppel-like factor 4 (gut) 0.035
Bptf bromodomain PHD finger transcription factor 0.035
Arpc4 actin related protein 2/3 complex, subunit 4 0.034
Mapkap1 mitogen-activated protein kinase associated protein 1 0.032
Ppp1r15a protein phosphatase 1, regulatory (inhibitor) subunit 15A 0.032
Ctdnep1 CTD nuclear envelope phosphatase 1 0.031
Pabpc1 poly(A) binding protein, cytoplasmic 1 0.031
Rela v-rel reticuloendotheliosis viral oncogene homolog A (avian) 0.030
Cd151 CD151 antigen 0.030
Ilk integrin linked kinase 0.030
Tomm40 translocase of outer mitochondrial membrane 40 homolog (yeast) 0.029
Tnrc6a trinucleotide repeat containing 6a 0.028
Rhob ras homolog gene family, member B 0.028
Mcl1 myeloid cell leukemia sequence 1 0.028
Wnk1 WNK lysine deficient protein kinase 1 0.028
Sp1 trans-acting transcription factor 1 0.027
Rest RE1-silencing transcription factor 0.026
D19Wsu162e DNA segment, Chr 19, Wayne State University 162, expressed 0.026
Tnrc6c trinucleotide repeat containing 6C 0.025
Ptpn22 protein tyrosine phosphatase, non-receptor type 22 (lymphoid) 0.025
Midn midnolin 0.025
Tnfaip3 tumor necrosis factor, alpha-induced protein 3 0.025
Akap9 A kinase (PRKA) anchor protein (yotiao) 9 0.025
Mael maelstrom homolog (Drosophila) 0.024
Hivep1 human immunodeficiency virus type I enhancer binding protein 1 0.024
Actn2 actinin alpha 2 0.024
Bmpr2 bone morphogenic protein receptor, type II (serine/threonine kinase) 0.023
Synrg synergin, gamma 0.023
Phlpp1 PH domain and leucine rich repeat protein phosphatase 1 0.023
Pum1 pumilio 1 (Drosophila) 0.023
Kif1b kinesin family member 1B 0.023
Hsp90ab1 heat shock protein 90 alpha (cytosolic), class B member 1 0.022
Errfi1 ERBB receptor feedback inhibitor 1 0.022
Mapkapk2 MAP kinase-activated protein kinase 2 0.022
Brd2 bromodomain containing 2 0.022
Aff1 AF4/FMR2 family, member 1 0.021
Nfkb1 nuclear factor of kappa light polypeptide gene enhancer in B-cells 1, p105 0.021
Per1 period homolog 1 (Drosophila) 0.021
Dyrk1a dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1a 0.021
Blnk B-cell linker 0.020
Igh immunoglobulin heavy chain complex 0.020
Foxo1 forkhead box O1 0.020
Mlf2 myeloid leukemia factor 2 0.019
Pim3 proviral integration site 3 0.019
Sp4 trans-acting transcription factor 4 0.019
Mll1 myeloid/lymphoid or mixed-lineage leukemia 1 0.019
Arhgdia Rho GDP dissociation inhibitor (GDI) alpha 0.019
Mknk2 MAP kinase-interacting serine/threonine kinase 2 0.019
Nphs2 nephrosis 2 homolog, podocin (human) 0.018
Nfkbiz nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta 0.018
Galnt2 UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2 0.018
Crb2 crumbs homolog 2 (Drosophila) 0.018
Irf2bp2 interferon regulatory factor 2 binding protein 2 0.018
Homer1 homer homolog 1 (Drosophila) 0.018
Dact3 dapper homolog 3, antagonist of beta-catenin (xenopus) 0.018
Pknox1 Pbx/knotted 1 homeobox 0.018
Gnb2l1 guanine nucleotide binding protein (G protein), beta polypeptide 2 like 1 0.017
Pparg peroxisome proliferator activated receptor gamma 0.017
Map3k5 mitogen-activated protein kinase kinase kinase 5 0.017
Tgif1 TGFB-induced factor homeobox 1 0.017
Agap3 ArfGAP with GTPase domain, ankyrin repeat and PH domain 3 0.017
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Rattus norvegicus
Name Description Probability Func Analog Organism
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Saccharomyces cerevisiae
Name Description Probability Func Analog Organism