IMP

Process View

Danio rerio

6 genes annotated in zebrafish

response to retinoic acid

Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a retinoic acid stimulus.

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Known genes in the process in zebrafish Include functional analogs

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Gene Predictions

Click on a gene's description to view its network relationships with genes known to be involved in "response to retinoic acid"

Show only novel predictions Show only unknown genes Highlight genes with functional analogs involved in "response to retinoic acid" (in gray)

Name	Description	Probability	Func Analog Organism
nr2f2	nuclear receptor subfamily 2, group F, member 2	0.698	Zebrafish
rarab	retinoic acid receptor, alpha b	0.373	Human Zebrafish Mouse
raraa	retinoic acid receptor, alpha a	0.326
rxrga	retinoid x receptor, gamma a	0.303	Zebrafish Rat
col5a1	procollagen, type V, alpha 1	0.295
cyp26b1	cytochrome P450, family 26, subfamily b, polypeptide 1	0.164
sox11a	SRY-box containing gene 11a	0.158
nkx2.5	NK2 transcription factor related 5	0.152
hnf1ba	HNF1 homeobox Ba	0.151
hoxa3a	homeo box A3a	0.121
her1	hairy-related 1	0.109
fgf8a	fibroblast growth factor 8 a	0.105
lft2	lefty2	0.097	Mouse
bmp2b	bone morphogenetic protein 2b	0.090	Rat
rxraa	retinoid X receptor, alpha a	0.088	Human Zebrafish Rat
sparc	secreted acidic cysteine rich glycoprotein	0.075
sox9a	SRY-box containing gene 9a	0.072	Human Mouse
egr2b	early growth response 2b	0.071
dlc	deltaC	0.065
b2m	beta-2-microglobulin	0.064
nr1d2b	nuclear receptor subfamily 1, group D, member 2b	0.058	Zebrafish
mespa	mesoderm posterior a	0.056
irx7	iroquois homeobox protein 7	0.056
eve1	even-skipped-like1	0.055
aqp1a.1	aquaporin 1a, tandem duplicate 1	0.054
tbx6	T-box gene 6	0.053
rxrab	retinoid x receptor, alpha b	0.053	Zebrafish
rxrba	retinoid x receptor, beta a	0.049
col1a1a	collagen, type I, alpha 1a	0.048	Rat
flt4	fms-related tyrosine kinase 4	0.046
stat1a	signal transduction and activation of transcription 1a	0.043
tbp	TATA box binding protein	0.042
flh	floating head	0.040
gamt	guanidinoacetate N-methyltransferase	0.039
wnt7bb	wingless-type MMTV integration site family, member 7Bb	0.038
lft1	lefty1	0.036	Mouse
mespb	mesoderm posterior b	0.034
ikzf1	IKAROS family zinc finger 1 (Ikaros)	0.034
tp73	tumor protein p73	0.030
aldh1a2	aldehyde dehydrogenase 1 family, member A2	0.030	Mouse
hand2	heart and neural crest derivatives expressed transcript 2	0.029
klf4	Kruppel-like factor 4	0.028
tcf7	transcription factor 7 (T-cell specific, HMG-box)	0.028
nog1	noggin 1	0.028
thrab	thyroid hormone receptor alpha b	0.028	Zebrafish
myl7	myosin, light polypeptide 7, regulatory	0.027
nr1d2a	nuclear receptor subfamily 1, group D, member 2a	0.026	Zebrafish
satb2	SATB homeobox 2	0.026
hoxb1b	homeo box B1b	0.025
gata5	GATA-binding protein 5	0.025
tgif1	TGFB-induced factor homeobox 1	0.024
shha	sonic hedgehog a	0.024
acvr1l	activin A receptor, type I like	0.024
postn	periostin, osteoblast specific factor	0.024
nr2e3	nuclear receptor subfamily 2, group E, member 3	0.023
her9	hairy-related 9	0.022
meis2.1	myeloid ecotropic viral integration site 2.1	0.022
vcanb	versican b	0.022
cyp11a1	cytochrome P450, subfamily XIA, polypeptide 1	0.022
zgc:64114	zgc:64114	0.021
ocrl	oculocerebrorenal syndrome of Lowe	0.020
tbx2b	T-box 2b	0.020
nkx2.3	NK2 transcription factor related 3	0.020
cfdl	complement factor D (adipsin) like	0.019
efnb2a	ephrin B2a	0.019
polr2d	polymerase (RNA) II (DNA directed) polypeptide D	0.019
rag1	recombination activating gene 1	0.018
rargb	retinoic acid receptor, gamma b	0.018	Human Zebrafish Mouse
cacnb2b	calcium channel, voltage-dependent, beta 2b	0.018
robo4	roundabout homolog 4	0.017
alcama	activated leukocyte cell adhesion molecule a	0.016
igf3	insulin-like growth factor 3	0.016
fgf3	fibroblast growth factor 3	0.016
socs3a	suppressor of cytokine signaling 3a	0.015
zgc:92533	zgc:92533	0.015
znf395b	zinc finger protein 395b	0.015
ntrk2b	neurotrophic tyrosine kinase, receptor, type 2b	0.015
dnmt6	DNA (cytosine-5-)-methyltransferase 6	0.015
bmpr1aa	bone morphogenetic protein receptor, type 1aa	0.015
tgfbi	transforming growth factor, beta-induced	0.014
edn1	endothelin 1	0.014
bmp4	bone morphogenetic protein 4	0.014	Rat
tbx20	T-box 20	0.014
sox17	SRY-box containing gene 17	0.014
rorab	RAR-related orphan receptor A, paralog b	0.014
nrarpa	notch-regulated ankyrin repeat protein a	0.013
rxrgb	retinoid X receptor, gamma b	0.013	Zebrafish Rat
irx3a	iroquois homeobox protein 3a	0.013
hoxb3a	homeo box B3a	0.013
pcdh8	protocadherin 8	0.013
zc4h2	zinc finger, C4H2 domain containing	0.013
nr1d1	nuclear receptor subfamily 1, group d, member 1	0.012	Zebrafish
cry3	cryptochrome 3	0.012
nr2f1a	nuclear receptor subfamily 2, group F, member 1a	0.012	Zebrafish
mgp	matrix Gla protein	0.012
ankra2	ankyrin repeat, family A (RFXANK-like), 2	0.012
her5	hairy-related 5	0.012
prdm5	PR domain containing 5	0.012
rhoub	ras homolog gene family, member Ub	0.012
lfng	lunatic fringe homolog	0.011
dtng	dystrobrevin, gamma and dystrobrevin, gamma-like	0.011
per2	period homolog 2 (Drosophila)	0.011
nr2f6b	nuclear receptor subfamily 2, group F, member 6b	0.011	Zebrafish
zgc:77060	zgc:77060	0.011
col17a1b	collagen, type XVII, alpha 1b	0.011
wnt5b	wingless-type MMTV integration site family, member 5b	0.010
cdx4	caudal type homeo box transcription factor 4	0.010
hoxb2a	homeo box B2a	0.010
hsd17b3	hydroxysteroid (17-beta) dehydrogenase 3	0.010