IMP

Process View

Homo sapiens

25 genes annotated in human

atp dependent chromatin remodeling

Dynamic structural changes to eukaryotic chromatin that require energy from the hydrolysis of ATP, ranging from local changes necessary for transcriptional regulation to global changes necessary for chromosome segregation, mediated by ATP-dependent chromatin-remodelling factors.

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Known genes in the process in human Include functional analogs

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Gene Predictions

Click on a gene's description to view its network relationships with genes known to be involved in "atp dependent chromatin remodeling"

Show only novel predictions Show only unknown genes Highlight genes with functional analogs involved in "atp dependent chromatin remodeling" (in gray)

Name	Description	Probability	Func Analog Organism
HDAC2	histone deacetylase 2	1.000
SMARCA4	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4	1.000
HDAC1	histone deacetylase 1	1.000
SMARCC1	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1	1.000
ACTL6A	actin-like 6A	1.000
RUVBL1	RuvB-like 1 (E. coli)	1.000
CHD4	chromodomain helicase DNA binding protein 4	1.000
RBBP4	retinoblastoma binding protein 4	1.000
ARID1A	AT rich interactive domain 1A (SWI-like)	0.999	Mouse
RUVBL2	RuvB-like 2 (E. coli)	0.996	Yeast
KDM1A	lysine (K)-specific demethylase 1A	0.996
YY1	YY1 transcription factor	0.996
SMARCC2	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2	0.991
MYC	v-myc myelocytomatosis viral oncogene homolog (avian)	0.991
MTA3	metastasis associated 1 family, member 3	0.989	Human
SIN3A	SIN3 homolog A, transcription regulator (yeast)	0.986
GATAD2A	GATA zinc finger domain containing 2A	0.958	Human
MTA1	metastasis associated 1	0.941	Human
SMARCD1	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1	0.928	Human
ACTG1	actin, gamma 1	0.909	Human
ARID2	AT rich interactive domain 2 (ARID, RFX-like)	0.887
CFL1	cofilin 1 (non-muscle)	0.867
ARID1B	AT rich interactive domain 1B (SWI1-like)	0.820
VPS72	vacuolar protein sorting 72 homolog (S. cerevisiae)	0.789
MBD2	methyl-CpG binding domain protein 2	0.783
C20orf20	chromosome 20 open reading frame 20	0.779
CBX5	chromobox homolog 5	0.774
MBD3	methyl-CpG binding domain protein 3	0.774
MTA2	metastasis associated 1 family, member 2	0.730
BAZ1B	bromodomain adjacent to zinc finger domain, 1B	0.716
CHD7	chromodomain helicase DNA binding protein 7	0.699	Human
MRFAP1	Morf4 family associated protein 1	0.671
ACTB	actin, beta	0.657
NCOR1	nuclear receptor corepressor 1	0.648
GATAD2B	GATA zinc finger domain containing 2B	0.615
SMAD2	SMAD family member 2	0.584
CHD8	chromodomain helicase DNA binding protein 8	0.520
SUMO2	SMT3 suppressor of mif two 3 homolog 2 (S. cerevisiae)	0.498
TRRAP	transformation/transcription domain-associated protein	0.444	Fly
PPARA	peroxisome proliferator-activated receptor alpha	0.438
RBBP7	retinoblastoma binding protein 7	0.436	Human
SMARCA5	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5	0.434
BAZ1A	bromodomain adjacent to zinc finger domain, 1A	0.417
ESR1	estrogen receptor 1	0.416
MORF4L1	mortality factor 4 like 1	0.318	Fly
MORF4L2	mortality factor 4 like 2	0.318	Fly
CHD3	chromodomain helicase DNA binding protein 3	0.292	Human
SET	SET nuclear oncogene	0.289
PBRM1	polybromo 1	0.283
SMARCE1	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1	0.271
DMAP1	DNA methyltransferase 1 associated protein 1	0.248	Yeast
ZFYVE9	zinc finger, FYVE domain containing 9	0.214
PTMA	prothymosin, alpha	0.189
RPA1	replication protein A1, 70kDa	0.175
RCOR1	REST corepressor 1	0.164
SAP30	Sin3A-associated protein, 30kDa	0.145
CHAF1A	chromatin assembly factor 1, subunit A (p150)	0.144
NR2E3	nuclear receptor subfamily 2, group E, member 3	0.142
APPL1	adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 1	0.141
EP400	E1A binding protein p400	0.130	Fly
UBTF	upstream binding transcription factor, RNA polymerase I	0.122
GAPDH	glyceraldehyde-3-phosphate dehydrogenase	0.113
PCNA	proliferating cell nuclear antigen	0.113
MYH11	myosin, heavy chain 11, smooth muscle	0.111
CFL2	cofilin 2 (muscle)	0.109
CDK2AP1	cyclin-dependent kinase 2 associated protein 1	0.098
NPM1	nucleophosmin (nucleolar phosphoprotein B23, numatrin)	0.097
SMARCA2	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2	0.093	Human Yeast Fly
WHSC1	Wolf-Hirschhorn syndrome candidate 1	0.093
DPCD	deleted in primary ciliary dyskinesia homolog (mouse)	0.092
CARM1	coactivator-associated arginine methyltransferase 1	0.085
SMARCB1	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1	0.083
SP1	Sp1 transcription factor	0.081
HMGB1	high mobility group box 1	0.078
KAT5	K(lysine) acetyltransferase 5	0.077
TUBA1B	tubulin, alpha 1b	0.069
CDAN1	congenital dyserythropoietic anemia, type I	0.064
NONO	non-POU domain containing, octamer-binding	0.063
TMSB4X	thymosin beta 4, X-linked	0.056
BCL11B	B-cell CLL/lymphoma 11B (zinc finger protein)	0.050
CELF1	CUGBP, Elav-like family member 1	0.049
NCOR2	nuclear receptor corepressor 2	0.044
TLK1	tousled-like kinase 1	0.043
DNMT1	DNA (cytosine-5-)-methyltransferase 1	0.042
INO80	INO80 homolog (S. cerevisiae)	0.042	Yeast
ASF1B	ASF1 anti-silencing function 1 homolog B (S. cerevisiae)	0.041	Yeast
ANP32A	acidic (leucine-rich) nuclear phosphoprotein 32 family, member A	0.040	Human
SNW1	SNW domain containing 1	0.038
MRFAP1L1	Morf4 family associated protein 1-like 1	0.038
C14orf43	chromosome 14 open reading frame 43	0.037
MECP2	methyl CpG binding protein 2 (Rett syndrome)	0.036
CHAF1B	chromatin assembly factor 1, subunit B (p60)	0.035
GSN	gelsolin	0.034
MSH6	mutS homolog 6 (E. coli)	0.034
BUB3	budding uninhibited by benzimidazoles 3 homolog (yeast)	0.034
H2AFZ	H2A histone family, member Z	0.033
TOP2B	topoisomerase (DNA) II beta 180kDa	0.032
CDR2	cerebellar degeneration-related protein 2, 62kDa	0.032
KPNA6	karyopherin alpha 6 (importin alpha 7)	0.031
HNRNPF	heterogeneous nuclear ribonucleoprotein F	0.031
POLE4	polymerase (DNA-directed), epsilon 4 (p12 subunit)	0.030
PIH1D1	PIH1 domain containing 1	0.029
ACTC1	actin, alpha, cardiac muscle 1	0.029	Human
HIST1H3B	histone cluster 1, H3b	0.029
DNTTIP1	deoxynucleotidyltransferase, terminal, interacting protein 1	0.027
H3F3A	H3 histone, family 3A	0.027
BRCA2	breast cancer 2, early onset	0.025
PFN1	profilin 1	0.025
TRIM63	tripartite motif containing 63	0.025
MMS22L	MMS22-like, DNA repair protein	0.024
ACTR5	ARP5 actin-related protein 5 homolog (yeast)	0.024
CTCF	CCCTC-binding factor (zinc finger protein)	0.024
TTI1	Tel2 interacting protein 1 homolog (S. pombe)	0.023
BBS10	Bardet-Biedl syndrome 10	0.023
TCF3	transcription factor 3 (E2A immunoglobulin enhancer binding factors E12/E47)	0.023
DMC1	DMC1 dosage suppressor of mck1 homolog, meiosis-specific homologous recombination (yeast)	0.022
HMGN2	high mobility group nucleosomal binding domain 2	0.022
TK1	thymidine kinase 1, soluble	0.021
RB1	retinoblastoma 1	0.019
CTBP1	C-terminal binding protein 1	0.018
ARID4B	AT rich interactive domain 4B (RBP1-like)	0.018
HMGB2	high mobility group box 2	0.017
POLE	polymerase (DNA directed), epsilon	0.017
HMG20B	high mobility group 20B	0.017
TUBA1C	tubulin, alpha 1c	0.017
KHDRBS1	KH domain containing, RNA binding, signal transduction associated 1	0.016
HNRNPD	heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa)	0.016
ZMYND8	zinc finger, MYND-type containing 8	0.016
FBL	fibrillarin	0.016
CBX3	chromobox homolog 3	0.015
UNKL	unkempt homolog (Drosophila)-like	0.015
ANP32B	acidic (leucine-rich) nuclear phosphoprotein 32 family, member B	0.014	Human
CDYL	chromodomain protein, Y-like	0.014
DEK	DEK oncogene	0.014
DUT	deoxyuridine triphosphatase	0.014
ANP32E	acidic (leucine-rich) nuclear phosphoprotein 32 family, member E	0.014
INO80E	INO80 complex subunit E	0.014
BRD8	bromodomain containing 8	0.013
ACTR6	ARP6 actin-related protein 6 homolog (yeast)	0.013
DHX30	DEAH (Asp-Glu-Ala-His) box polypeptide 30	0.013
ANKRD17	ankyrin repeat domain 17	0.013
PHF21A	PHD finger protein 21A	0.013
ZMYND11	zinc finger, MYND-type containing 11	0.012
AEBP2	AE binding protein 2	0.012
CBX1	chromobox homolog 1	0.012
HCFC1	host cell factor C1 (VP16-accessory protein)	0.012
BCLAF1	BCL2-associated transcription factor 1	0.011
HMG20A	high mobility group 20A	0.011
PRMT2	protein arginine methyltransferase 2	0.011
KPNB1	karyopherin (importin) beta 1	0.011
SUZ12	suppressor of zeste 12 homolog (Drosophila)	0.011
EED	embryonic ectoderm development	0.011
LMNB1	lamin B1	0.011
PRRC2C	proline-rich coiled-coil 2C	0.010
PTK2	PTK2 protein tyrosine kinase 2	0.010