IMP

Process View

Rattus norvegicus

24 genes annotated in rat

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synaptic vesicle localization

GO:0097479

Any process in which a synaptic vesicle or vesicles are transported to, and/or maintained in, a specific location.

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Known genes in the process in rat Include functional analogs

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Gene Predictions

Click on a gene's description to view its network relationships with genes known to be involved in "synaptic vesicle localization"

Show only novel predictions Show only unknown genes Highlight genes with functional analogs involved in "synaptic vesicle localization" (in gray)

Name	Description	Probability	Func Analog Organism
Syn1	synapsin I	0.790
Amph	amphiphysin	0.688	Mouse
Gnao1	guanine nucleotide binding protein (G protein), alpha activating activity polypeptide O	0.417
Syp	synaptophysin	0.318
Stx1a	syntaxin 1A (brain)	0.312
Syt11	synaptotagmin XI	0.292	Rat
Magi2	membrane associated guanylate kinase, WW and PDZ domain containing 2	0.270
Syt1	synaptotagmin I	0.267	Mouse Rat Fly
Syn2	synapsin II	0.251
Snap23	synaptosomal-associated protein 23	0.226
Sh3gl2	SH3-domain GRB2-like 2	0.217	Mouse Fly
Snap25	synaptosomal-associated protein 25	0.212
Apba2	amyloid beta (A4) precursor protein-binding, family A, member 2	0.195
Apbb1	amyloid beta (A4) precursor protein-binding, family B, member 1 (Fe65)	0.179
Dnm1	dynamin 1	0.162	Fly
Magi1	membrane associated guanylate kinase, WW and PDZ domain containing 1	0.126
Gng7	guanine nucleotide binding protein (G protein), gamma 7	0.126
Cplx2	complexin 2	0.125
Vamp2	vesicle-associated membrane protein 2	0.119	Mouse
Atp2b2	ATPase, Ca++ transporting, plasma membrane 2	0.116
Pde1b	phosphodiesterase 1B, calmodulin-dependent	0.110
Slc17a7	solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 7	0.107
Slc25a3	solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 3	0.105
Faim2	Fas apoptotic inhibitory molecule 2	0.103
Rab3a	RAB3A, member RAS oncogene family	0.101
LOC100364212	heterogeneous nuclear ribonucleoprotein K-like	0.096
Dlg4	discs, large homolog 4 (Drosophila)	0.095	Mouse
Kalrn	kalirin, RhoGEF kinase	0.092
Grid2	glutamate receptor, ionotropic, delta 2	0.089
Mdh1	malate dehydrogenase 1, NAD (soluble)	0.088
Camk2n2	calcium/calmodulin-dependent protein kinase II inhibitor 2	0.086
Stxbp1	syntaxin binding protein 1	0.084
Gnai3	guanine nucleotide binding protein (G protein), alpha inhibiting 3	0.080
Cplx1	complexin 1	0.075
Apba1	amyloid beta (A4) precursor protein-binding, family A, member 1	0.073
Dlgap3	discs, large (Drosophila) homolog-associated protein 3	0.072
Faah	fatty acid amide hydrolase	0.070
Madd	MAP-kinase activating death domain	0.066
Camkv	CaM kinase-like vesicle-associated	0.065
Cartpt	CART prepropeptide	0.063
Cacna1b	calcium channel, voltage-dependent, N type, alpha 1B subunit	0.062
Gnaz	guanine nucleotide binding protein (G protein), alpha z polypeptide	0.061
Neu2	sialidase 2 (cytosolic sialidase)	0.061
Dpp6	dipeptidylpeptidase 6	0.059
Ap2a1	adaptor-related protein complex 2, alpha 1 subunit	0.059
Gabbr2	gamma-aminobutyric acid (GABA) B receptor 2	0.056	Fly
Eef1a2	eukaryotic translation elongation factor 1 alpha 2	0.055
Unc5a	unc-5 homolog A (C. elegans)	0.052
Wdr7	WD repeat domain 7	0.052
Nrxn1	neurexin 1	0.049
Kctd13	potassium channel tetramerisation domain containing 13	0.048
Grm8	glutamate receptor, metabotropic 8	0.046
Kcnq2	potassium voltage-gated channel, KQT-like subfamily, member 2	0.045
Atp6v1b2	ATPase, H transporting, lysosomal V1 subunit B2	0.042
Freq	frequenin homolog (Drosophila)	0.042
Cspg5	chondroitin sulfate proteoglycan 5	0.042
Shbg	sex hormone binding globulin	0.041
Adap1	ArfGAP with dual PH domains 1	0.041
Ina	internexin neuronal intermediate filament protein, alpha	0.040
Rims1	regulating synaptic membrane exocytosis 1	0.040
Snrpn	small nuclear ribonucleoprotein polypeptide N	0.039
Atp1a3	ATPase, Na+/K+ transporting, alpha 3 polypeptide	0.039
Sdcbp	syndecan binding protein	0.039
Ndrg4	N-myc downstream regulated gene 4	0.039
Grip1	glutamate receptor interacting protein 1	0.038
Cltc	clathrin, heavy chain (Hc)	0.038
Adrbk2	adrenergic, beta, receptor kinase 2	0.037
Hpca	hippocalcin	0.037
Tagln3	transgelin 3	0.036
Slc4a3	solute carrier family 4 (anion exchanger), member 3	0.034
Pcdha13	protocadherin alpha 13	0.033
Stxbp2	syntaxin binding protein 2	0.033
Atp6v1a	ATPase, H+ transporting, lysosomal V1 subunit A	0.033
Sncb	synuclein, beta	0.032
Vps52	vacuolar protein sorting 52 homolog (S. cerevisiae)	0.031
C1ql1	complement component 1, q subcomponent-like 1	0.031
App	amyloid beta (A4) precursor protein	0.030
Glrb	glycine receptor, beta	0.030
Ywhaz	tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide	0.030
Mgat3	mannosyl (beta-1,4-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase	0.029
Pacsin1	protein kinase C and casein kinase substrate in neurons 1	0.029	Mouse
Kcna1	potassium voltage-gated channel, shaker-related subfamily, member 1	0.029
Lrrc7	leucine rich repeat containing 7	0.029
Prap1	proline-rich acidic protein 1	0.028
Map1b	microtubule-associated protein 1B	0.028
Chrna4	cholinergic receptor, nicotinic, alpha 4	0.028
Gabbr1	gamma-aminobutyric acid (GABA) B receptor 1	0.027
Dnajb9	DnaJ (Hsp40) homolog, subfamily B, member 9	0.026
Mapk10	mitogen activated protein kinase 10	0.026
Acvr1	activin A receptor, type I	0.026
Rph3a	rabphilin 3A	0.026	Rat
Slc25a27	solute carrier family 25, member 27	0.026
Rab6a	RAB6A, member RAS oncogene family	0.025
Nacc1	nucleus accumbens associated 1, BEN and BTB (POZ) domain containing	0.025
Atp1b2	ATPase, Na+/K+ transporting, beta 2 polypeptide	0.025
Pip4k2b	phosphatidylinositol-5-phosphate 4-kinase, type II, beta	0.025
Nell1	NEL-like 1 (chicken)	0.024
Psd	pleckstrin and Sec7 domain containing	0.024
Ctxn1	cortexin 1	0.024
Copb2	coatomer protein complex, subunit beta 2 (beta prime)	0.024
Nefl	neurofilament, light polypeptide	0.024
Hspa5	heat shock protein 5	0.024
Snap91	synaptosomal-associated protein 91	0.024
Grin2d	glutamate receptor, ionotropic, N-methyl D-aspartate 2D	0.024
Chrm4	cholinergic receptor, muscarinic 4	0.024
Adrbk1	adrenergic, beta, receptor kinase 1	0.023
RGD1562618	similar to RIKEN cDNA 6030419C18 gene	0.023
Vamp1	vesicle-associated membrane protein 1	0.023
St18	suppression of tumorigenicity 18	0.022
Nrarp	Notch-regulated ankyrin repeat protein	0.022
Pik3r2	phosphoinositide-3-kinase, regulatory subunit 2 (beta)	0.022
Kcnk10	potassium channel, subfamily K, member 10	0.022
Syt9	synaptotagmin IX	0.022	Rat
Hpcal4	hippocalcin-like 4	0.022
Arf3	ADP-ribosylation factor 3	0.021
Arhgap23	Rho GTPase activating protein 23	0.021
Olr1278	olfactory receptor 1278	0.021
Grin2c	glutamate receptor, ionotropic, N-methyl D-aspartate 2C	0.021
Syt4	synaptotagmin IV	0.021	Rat
Ctsb	cathepsin B	0.021
Cdk11b	cyclin-dependent kinase 11B	0.021
Kcnc3	potassium voltage gated channel, Shaw-related subfamily, member 3	0.021
Klc1	kinesin light chain 1	0.020
Pnck	pregnancy upregulated non-ubiquitously expressed CaM kinase	0.020
Tulp1	tubby like protein 1	0.020
Spock2	sparc/osteonectin, cwcv and kazal-like domains proteoglycan 2	0.020
Capza2	capping protein (actin filament) muscle Z-line, alpha 2	0.020
Tmem49	transmembrane protein 49	0.020
Gabrb3	gamma-aminobutyric acid (GABA) A receptor, beta 3	0.020
Kcnab2	potassium voltage-gated channel, shaker-related subfamily, beta member 2	0.020
Apc	adenomatous polyposis coli	0.020
Cnrip1	cannabinoid receptor interacting protein 1	0.020
Kcnab1	potassium voltage-gated channel, shaker-related subfamily, beta member 1	0.019
Gprin1	G protein-regulated inducer of neurite outgrowth 1	0.019
Nfasc	neurofascin	0.019
Tsc2	tuberous sclerosis 2	0.019
Tspan33	tetraspanin 33	0.019
Cntnap1	contactin associated protein 1	0.019
Lphn3	latrophilin 3	0.019
Celsr3	cadherin, EGF LAG seven-pass G-type receptor 3 (flamingo homolog, Drosophila)	0.019
Tnr	tenascin R	0.019
Ncoa2	nuclear receptor coactivator 2	0.019
Dnm3	dynamin 3	0.018	Fly
Prdx1	peroxiredoxin 1	0.018
Dlgap1	discs, large (Drosophila) homolog-associated protein 1	0.018
Gria2	glutamate receptor, ionotropic, AMPA 2	0.018
Snrk	SNF related kinase	0.018
Sptan1	spectrin, alpha, non-erythrocytic 1	0.018
Caskin1	CASK interacting protein 1	0.018
Fbxo23	F-box only protein 23	0.018
Kif5c	kinesin family member 5C	0.018
Cdc2l5	cell division cycle 2-like 5 (cholinesterase-related cell division controller)	0.018
Slc26a1	solute carrier family 26 (sulfate transporter), member 1	0.018
Vsnl1	visinin-like 1	0.017
Robo2	roundabout homolog 2 (Drosophila)	0.017
Gabrd	gamma-aminobutyric acid (GABA) A receptor, delta	0.017
Mapk8ip2	mitogen-activated protein kinase 8 interacting protein 2	0.017
LOC682105	similar to receptor expression enhancing protein 2	0.017
Grik5	glutamate receptor, ionotropic, kainate 5	0.017
Arhgef11	Rho guanine nucleotide exchange factor (GEF) 11	0.017
Sept7	septin 7	0.017
Oaz1	ornithine decarboxylase antizyme 1	0.017
Sstr3	somatostatin receptor 3	0.017
Accn1	amiloride-sensitive cation channel 1, neuronal	0.017
Rab11a	RAB11a, member RAS oncogene family	0.017
Cbln1	cerebellin 1 precursor	0.017
Fbxo25	F-box protein 25	0.017
Tubb3	tubulin, beta 3	0.017
Epb49	erythrocyte membrane protein band 4.9 (dematin)	0.016
Dnajc5	DnaJ (Hsp40) homolog, subfamily C, member 5	0.016
Cdc42bpa	CDC42 binding protein kinase alpha	0.016
Stx12	syntaxin 12	0.016
Jtb	jumping translocation breakpoint	0.016
Gad2	glutamate decarboxylase 2	0.016
Dlg3	discs, large homolog 3 (Drosophila)	0.016
Flt4	fms-related tyrosine kinase 4	0.016
Sorbs2	sorbin and SH3 domain containing 2	0.016
Syt6	synaptotagmin VI	0.016	Rat
Kcnh4	potassium voltage-gated channel, subfamily H (eag-related), member 4	0.016
LOC100362727	ubiquitin carboxyl-terminal hydrolase CYLD	0.016
Ttc9b	tetratricopeptide repeat domain 9B	0.016
Adra1b	adrenergic, alpha-1B-, receptor	0.015
Kcnab3	potassium voltage-gated channel, shaker-related subfamily, beta member 3	0.015
Clstn3	calsyntenin 3	0.015
Cxcr5	chemokine (C-X-C motif) receptor 5	0.015
Htr2c	5-hydroxytryptamine (serotonin) receptor 2C	0.015
Kcnk3	potassium channel, subfamily K, member 3	0.015
Camk1g	calcium/calmodulin-dependent protein kinase IG	0.015
Pak3	p21 protein (Cdc42/Rac)-activated kinase 3	0.015
Clcn7	chloride channel 7	0.015
Bin1	bridging integrator 1	0.015
Oprl1	opiate receptor-like 1	0.015
Ide	insulin degrading enzyme	0.015
RGD1306151	similar to hypothetical protein DKFZp761D0211	0.015
Fancc	Fanconi anemia, complementation group C	0.015
Oprd1	opioid receptor, delta 1	0.014
Elavl3	ELAV (embryonic lethal, abnormal vision, Drosophila)-like 3 (Hu antigen C)	0.014
Myt1l	myelin transcription factor 1-like	0.014
Mapk1	mitogen activated protein kinase 1	0.014
Sez6l2	seizure related 6 homolog (mouse)-like 2	0.014
Cyth1	cytohesin 1	0.014
Lzts1	leucine zipper, putative tumor suppressor 1	0.014
Grasp	GRP1 (general receptor for phosphoinositides 1)-associated scaffold protein	0.014
Doc2b	double C2-like domains, beta	0.014
Ptprt	protein tyrosine phosphatase, receptor type, T	0.014
Pcdhgc3	protocadherin gamma subfamily C, 3	0.014
Prkcg	protein kinase C, gamma	0.014
Thrb	thyroid hormone receptor beta	0.014
Ppp2r2a	protein phosphatase 2 (formerly 2A), regulatory subunit B, alpha isoform	0.014
Npy	neuropeptide Y	0.014
Ap2a2	adaptor-related protein complex 2, alpha 2 subunit	0.014
Rap2ip	Rap2 interacting protein	0.014
Unc13a	unc-13 homolog A (C. elegans)	0.014
Cntn4	contactin 4	0.014
Lnpep	leucyl/cystinyl aminopeptidase	0.014
Psma2	proteasome (prosome, macropain) subunit, alpha type 2	0.014
Impa1	Inositol (myo)-1(or 4)-monophosphatase 1	0.013
Scn2b	sodium channel, voltage-gated, type II, beta	0.013
Rab3b	RAB3B, member RAS oncogene family	0.013	Rat
Gnal	guanine nucleotide binding protein, alpha stimulating, olfactory type	0.013
Gpr12	G protein-coupled receptor 12	0.013
Spock1	sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 1	0.013
Rtn4rl1	reticulon 4 receptor-like 1	0.013
Slc35b1	solute carrier family 35, member B1	0.013
Mos	Moloney sarcoma oncogene	0.013
RGD1559748	similar to Palate lung and nasal carcinoma-like protein precursor (Tongue plunc-like protein)	0.013
Prkar1b	protein kinase, cAMP dependent regulatory, type I, beta	0.013
Syt7	synaptotagmin VII	0.013	Rat
Apcs	amyloid P component, serum	0.013
Sptbn2	spectrin, beta, non-erythrocytic 2	0.013
Rasl10b	RAS-like, family 10, member B	0.013
Rcvrn	recoverin	0.013
Uhmk1	U2AF homology motif (UHM) kinase 1	0.013
Gap43	growth associated protein 43	0.013
Sept3	septin 3	0.013
Mapk9	mitogen-activated protein kinase 9	0.013
Cnga2	cyclic nucleotide gated channel alpha 2	0.013
Vamp3	vesicle-associated membrane protein 3	0.013
Olr1641	olfactory receptor 1641	0.013
Psap	prosaposin	0.013
Chrnb2	cholinergic receptor, nicotinic, beta 2 (neuronal)	0.013
Itpkb	inositol 1,4,5-trisphosphate 3-kinase B	0.012
Nr2c2	nuclear receptor subfamily 2, group C, member 2	0.012
Abr	active BCR-related gene	0.012
Rab10	RAB10, member RAS oncogene family	0.012
Exoc7	exocyst complex component 7	0.012
Ndfip2	Nedd4 family interacting protein 2	0.012
Gdf11	growth differentiation factor 11	0.012
Myo16	myosin XVI	0.012
RGD1565859	RGD1565859	0.012
Epn1	Epsin 1	0.012
Klhl22	kelch-like 22 (Drosophila)	0.012
Glg1	golgi apparatus protein 1	0.012
Kcnn3	potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3	0.012
Notch4	Notch homolog 4 (Drosophila)	0.012
Six3	SIX homeobox 3	0.012
Adar	adenosine deaminase, RNA-specific	0.012
Chrm3	cholinergic receptor, muscarinic 3	0.012
Ctnna2	catenin (cadherin associated protein), alpha 2	0.012
Gulo	gulonolactone (L-) oxidase	0.012
Ttc36	tetratricopeptide repeat domain 36	0.012
Gabrg1	gamma-aminobutyric acid (GABA) A receptor, gamma 1	0.012
Hmox2	heme oxygenase (decycling) 2	0.012
Stx1b	syntaxin 1B	0.012	Rat Fly
Camk2b	calcium/calmodulin-dependent protein kinase II beta	0.012
Mtmr7	myotubularin related protein 7	0.012
Ggt7	gamma-glutamyltransferase 7	0.012
Hk1	hexokinase 1	0.012
Sh3glb2	SH3-domain GRB2-like endophilin B2	0.012
Ache	acetylcholinesterase	0.012
Fev	FEV (ETS oncogene family)	0.012
Gpsm1	G-protein signaling modulator 1 (AGS3-like, C. elegans)	0.012
RGD1566083	similar to hypothetical protein MGC24047	0.012
Calcb	calcitonin-related polypeptide, beta	0.011
Fam57b	family with sequence similarity 57, member B	0.011
Hrk	harakiri, BCL2 interacting protein (contains only BH3 domain)	0.011
Col1a1	collagen, type I, alpha 1	0.011
Kcnmb4	potassium large conductance calcium-activated channel, subfamily M, beta member 4	0.011
Car11	carbonic anhydrase 11	0.011
B3gat1	beta-1,3-glucuronyltransferase 1 (glucuronosyltransferase P)	0.011
Pdxp	pyridoxal (pyridoxine, vitamin B6) phosphatase	0.011
Cadps	Ca++-dependent secretion activator	0.011	Mouse Fly
Mcf2l	MCF.2 cell line derived transforming sequence-like	0.011
Kcnf1	potassium voltage-gated channel, subfamily F, member 1	0.011
Mmp24	matrix metallopeptidase 24	0.011
Csdc2	cold shock domain containing C2, RNA binding	0.011
Aif1l	allograft inflammatory factor 1-like	0.011
Cbx6	chromobox homolog 6	0.011
Nudt16l1	nudix (nucleoside diphosphate linked moiety X)-type motif 16-like 1	0.011
Cdh22	cadherin 22	0.011
RGD1304952	similar to RIKEN cDNA C530028O21 gene	0.011
Vdac1	voltage-dependent anion channel 1	0.011
Grik3	glutamate receptor, ionotropic, kainate 3	0.011
Azin1	antizyme inhibitor 1	0.011
Kcnj9	potassium inwardly-rectifying channel, subfamily J, member 9	0.011
LOC100359454	hypothetical protein LOC100359454	0.011
Ddn	dendrin	0.011
Kcnip3	Kv channel interacting protein 3, calsenilin	0.011
Ppp2r2c	protein phosphatase 2 (formerly 2A), regulatory subunit B, gamma isoform	0.011
Gp1bb	glycoprotein Ib (platelet), beta polypeptide	0.011
Kiss1r	KISS1 receptor	0.011
Necap1	NECAP endocytosis associated 1	0.011
RGD1564664	similar to LOC387763 protein	0.011
Kcnj12	potassium inwardly-rectifying channel, subfamily J, member 12	0.011
Apbb3	amyloid beta (A4) precursor protein-binding, family B, member 3	0.011
Onecut1	one cut homeobox 1	0.011
Glp1r	glucagon-like peptide 1 receptor	0.011
P2rx2	purinergic receptor P2X, ligand-gated ion channel, 2	0.011
Cacnb1	calcium channel, voltage-dependent, beta 1 subunit	0.011
RGD1560171	similar to PRO0149 protein	0.011
Gnaq	guanine nucleotide binding protein (G protein), q polypeptide	0.011
Sh3gl3	SH3-domain GRB2-like 3	0.010	Fly
Syt17	synaptotagmin XVII	0.010	Rat
Pi4ka	phosphatidylinositol 4-kinase, catalytic, alpha	0.010
Atp6v1c1	ATPase, H+ transporting, lysosomal V1 subunit C1	0.010
Zranb2	zinc finger, RAN-binding domain containing 2	0.010
Pde2a	phosphodiesterase 2A, cGMP-stimulated	0.010
Epha5	EphA5	0.010
Aldoa	aldolase A, fructose-bisphosphate	0.010
Ift122	intraflagellar transport 122 homolog (Chlamydomonas)	0.010
Cacna1a	calcium channel, voltage-dependent, P/Q type, alpha 1A subunit	0.010
Tubb4	tubulin, beta 4	0.010
Copb1	coatomer protein complex, subunit beta 1	0.010
Slc1a2	solute carrier family 1 (glial high affinity glutamate transporter), member 2	0.010
Ppp1cb	protein phosphatase 1, catalytic subunit, beta isoform	0.010
Chn2	chimerin (chimaerin) 2	0.010
Cap2	CAP, adenylate cyclase-associated protein, 2 (yeast)	0.010
Gad1	glutamate decarboxylase 1	0.010
Slc12a1	solute carrier family 12 (sodium/potassium/chloride transporters), member 1	0.010
Cntn1	contactin 1	0.010
Synrg	synergin, gamma	0.010
Sumo1	SMT3 suppressor of mif two 3 homolog 1 (S. cerevisiae)	0.010