IMP

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Rattus norvegicus

35 genes annotated in rat

regulation of sequence specific dna binding transcription factor activity

Any process that modulates the frequency, rate or extent of the activity of a transcription factor, any factor involved in the initiation or regulation of transcription.

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Known genes in the process in rat Include functional analogs

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Gene Predictions

Click on a gene's description to view its network relationships with genes known to be involved in "regulation of sequence specific dna binding transcription factor activity"

Show only novel predictions Show only unknown genes Highlight genes with functional analogs involved in "regulation of sequence specific dna binding transcription factor activity" (in gray)

Name	Description	Probability	Func Analog Organism
Tnfrsf1a	tumor necrosis factor receptor superfamily, member 1a	0.105
Cacna1c	calcium channel, voltage-dependent, L type, alpha 1C subunit	0.049	Rat
Klf6	Kruppel-like factor 6	0.049
Lhb	luteinizing hormone beta	0.046
Id1	inhibitor of DNA binding 1	0.046	Human
Usf2	upstream transcription factor 2, c-fos interacting	0.042
Robo1	roundabout homolog 1 (Drosophila)	0.038
Tgfbr2	transforming growth factor, beta receptor II	0.035
Icam1	intercellular adhesion molecule 1	0.035
Uhmk1	U2AF homology motif (UHM) kinase 1	0.034
Jak1	Janus kinase 1	0.031
Anxa2	annexin A2	0.030
Cxcl10	chemokine (C-X-C motif) ligand 10	0.027
Pacs1	phosphofurin acidic cluster sorting protein 1	0.027
Myd88	myeloid differentiation primary response gene 88	0.025	Mouse
Dusp1	dual specificity phosphatase 1	0.024
Id3	inhibitor of DNA binding 3	0.024	Human
Cnga4	cyclic nucleotide gated channel alpha 4	0.023
LOC100362331	rCG59612-like	0.023
Ntrk1	neurotrophic tyrosine kinase, receptor, type 1	0.023	Human
Ivl	involucrin	0.022
Ctdsp1	CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 1	0.022
Cyp11a1	cytochrome P450, family 11, subfamily a, polypeptide 1	0.022
Gfra2	GDNF family receptor alpha 2	0.022
Itpr2	inositol 1,4,5-triphosphate receptor, type 2	0.022
Ubtf	upstream binding transcription factor, RNA polymerase I	0.022
Galr2	galanin receptor 2	0.021
Bcl2	B-cell CLL/lymphoma 2	0.021
Gna15	guanine nucleotide binding protein, alpha 15	0.021
Gnai2	guanine nucleotide binding protein (G protein), alpha inhibiting 2	0.021
Fgr	Gardner-Rasheed feline sarcoma viral (v-fgr) oncogene homolog	0.021
Gabbr2	gamma-aminobutyric acid (GABA) B receptor 2	0.021
Zyx	zyxin	0.021
Tcf3	transcription factor 3	0.021
Ccnd3	cyclin D3	0.021
Alox5	arachidonate 5-lipoxygenase	0.020
Sbk1	SH3-binding domain kinase 1	0.020
Nudt3	nudix (nucleoside diphosphate linked moiety X)-type motif 3	0.020
Prlh	prolactin releasing hormone	0.020
Fgfr2	fibroblast growth factor receptor 2	0.020
Kcnj6	potassium inwardly-rectifying channel, subfamily J, member 6	0.020
Nfic	nuclear factor I/C	0.020
Il1a	interleukin 1 alpha	0.020
Dll3	delta-like 3 (Drosophila)	0.020
Hrh2	histamine receptor H 2	0.019
Hoxa1	homeo box A1	0.019
Myo1b	myosin Ib	0.019
Cd247	Cd247 molecule	0.019
Col9a1	collagen, type IX, alpha 1	0.019
Cntfr	ciliary neurotrophic factor receptor	0.019
Cast	calpastatin	0.019
Ptms	parathymosin	0.019
Sgk1	serum/glucocorticoid regulated kinase 1	0.019
Ptprc	protein tyrosine phosphatase, receptor type, C	0.018
F2rl1	coagulation factor II (thrombin) receptor-like 1	0.018
Has2	hyaluronan synthase 2	0.018
Foxd4	forkhead box D4	0.018
Mthfr	methylenetetrahydrofolate reductase (NAD(P)H)	0.017
Erbb4	v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)	0.017
Hmox1	heme oxygenase (decycling) 1	0.017
Csf1	colony stimulating factor 1 (macrophage)	0.017
Bex4	brain expressed, X-linked 4	0.017
Crk	v-crk sarcoma virus CT10 oncogene homolog (avian)	0.017
Ptafr	platelet-activating factor receptor	0.017
Smad7	SMAD family member 7	0.017
Mmp12	matrix metallopeptidase 12	0.017
LOC100364212	heterogeneous nuclear ribonucleoprotein K-like	0.017
Gpr176	G protein-coupled receptor 176	0.017
Scnn1b	sodium channel, nonvoltage-gated 1, beta	0.017
Sdc3	syndecan 3	0.017
Itpkb	inositol 1,4,5-trisphosphate 3-kinase B	0.017
Klk1b21	kallikrein 1-related peptidase b21	0.017
Rgs12	regulator of G-protein signaling 12	0.017
Orai1	ORAI calcium release-activated calcium modulator 1	0.016
P2ry2	purinergic receptor P2Y, G-protein coupled, 2	0.016
Cebpb	CCAAT/enhancer binding protein (C/EBP), beta	0.016
C1galt1	core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase, 1	0.016
Trim47	tripartite motif-containing 47	0.016
Igfbp5	insulin-like growth factor binding protein 5	0.016
Jak2	Janus kinase 2	0.016
Zfp36	zinc finger protein 36	0.016
Hoxc4	homeo box C4	0.016
Dock8	dedicator of cytokinesis 8	0.016
Nfasc	neurofascin	0.016
Irf1	interferon regulatory factor 1	0.016
Ube2g1	ubiquitin-conjugating enzyme E2G 1 (UBC7 homolog, yeast)	0.016
LOC100360501	ribonuclease inhibitor-like	0.016
Abcc8	ATP-binding cassette, subfamily C (CFTR/MRP), member 8	0.016
Psgb1	pregnancy-specific beta 1-glycoprotein	0.016
Nr4a3	nuclear receptor subfamily 4, group A, member 3	0.016
Csnk1g2	casein kinase 1, gamma 2	0.016
Lyn	v-yes-1 Yamaguchi sarcoma viral related oncogene homolog	0.015
Myh9	myosin, heavy chain 9, non-muscle	0.015
Klf12	Kruppel-like factor 12	0.015
Socs3	suppressor of cytokine signaling 3	0.015
Nr2f6	nuclear receptor subfamily 2, group F, member 6	0.015	Rat
Pde4d	phosphodiesterase 4D, cAMP-specific (phosphodiesterase E3 dunce homolog, Drosophila)	0.015
Bmpr1a	bone morphogenetic protein receptor, type IA	0.015
Scamp2	secretory carrier membrane protein 2	0.015
Psma7	proteasome (prosome, macropain) subunit, alpha type 7	0.015
Dnase1l3	deoxyribonuclease 1-like 3	0.015
Lims1	LIM and senescent cell antigen-like domains 1	0.015
Tcfe2a	transcription factor E2a	0.015	Human
Musk	muscle, skeletal, receptor tyrosine kinase	0.015
Bcl2l2	Bcl2-like 2	0.015
Fgfr1	Fibroblast growth factor receptor 1	0.015
Ascl1	achaete-scute complex homolog 1 (Drosophila)	0.015
Akap1	A kinase (PRKA) anchor protein 1	0.015
Cd44	Cd44 molecule	0.015
Gja6	gap junction protein, alpha 6	0.014
Fam148b	family with sequence similarity 148, member B	0.014
Psmc2	proteasome (prosome, macropain) 26S subunit, ATPase 2	0.014
Mpz	myelin protein zero	0.014
Kpnb1	karyopherin (importin) beta 1	0.014
Tnf	tumor necrosis factor (TNF superfamily, member 2)	0.014
Gja1	gap junction protein, alpha 1	0.014
Fut2	fucosyltransferase 2 (secretor status included)	0.014
Gdf10	growth differentiation factor 10	0.014	Rat
Pzp	pregnancy-zone protein	0.014
Tifa	TRAF-interacting protein with forkhead-associated domain	0.014
Scarb1	scavenger receptor class B, member 1	0.014
Hist1h1a	histone cluster 1, H1a	0.014
Apba3	amyloid beta (A4) precursor protein-binding, family A, member 3	0.014
Fam69b	family with sequence similarity 69, member B	0.014
Abi3	ABI family, member 3	0.014
Prkcd	protein kinase C, delta	0.014	Rat
PVR	poliovirus receptor	0.014
Cxcl6	chemokine (C-X-C motif) ligand 6 (granulocyte chemotactic protein 2)	0.014
Slc14a2	solute carrier family 14 (urea transporter), member 2	0.014
Rgs19	regulator of G-protein signaling 19	0.013
Pip4k2b	phosphatidylinositol-5-phosphate 4-kinase, type II, beta	0.013
Spry1	sprouty homolog 1, antagonist of FGF signaling (Drosophila)	0.013
Klf2	Kruppel-like factor 2 (lung)	0.013
Nos1	nitric oxide synthase 1, neuronal	0.013
Creb1	cAMP responsive element binding protein 1	0.013
Shox2	short stature homeobox 2	0.013
Mvp	major vault protein	0.013
St8sia4	ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4	0.013
LOC100360169	rCG21044-like	0.013
Pctk1	PCTAIRE protein kinase 1	0.013
Neurod2	neurogenic differentiation 2	0.013
Mc3r	melanocortin 3 receptor	0.013
Carhsp1	calcium regulated heat stable protein 1	0.013
Efnb1	ephrin B1	0.013
Sfrp4	secreted frizzled-related protein 4	0.013	Human Rat
Grpr	gastrin releasing peptide receptor	0.013
Slit3	slit homolog 3 (Drosophila)	0.013
Cnga1	cyclic nucleotide gated channel alpha 1	0.013
Psp	parotid secretory protein	0.013
Nfkbie	nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, epsilon	0.013
Mgat3	mannosyl (beta-1,4-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase	0.013
Capg	capping protein (actin filament), gelsolin-like	0.013
Mapk7	mitogen-activated protein kinase 7	0.013
Psmc1	proteasome (prosome, macropain) 26S subunit, ATPase, 1	0.013
Stat3	signal transducer and activator of transcription 3	0.013
Csnk1g3	casein kinase 1, gamma 3	0.013
Gdnf	glial cell derived neurotrophic factor	0.013
Cxcl1	chemokine (C-X-C motif) ligand 1 (melanoma growth stimulating activity, alpha)	0.013
Adm	adrenomedullin	0.013
Vegfa	vascular endothelial growth factor A	0.013	Human
Fgb	fibrinogen beta chain	0.013
Gnai1	guanine nucleotide binding protein (G protein), alpha inhibiting 1	0.013
Kit	v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog	0.012	Human
Cask	calcium/calmodulin-dependent serine protein kinase (MAGUK family)	0.012
Vcam1	vascular cell adhesion molecule 1	0.012
Ccl3	chemokine (C-C motif) ligand 3	0.012
Apol3	apolipoprotein L, 3	0.012
Mapk14	mitogen activated protein kinase 14	0.012
Map4k1	mitogen activated protein kinase kinase kinase kinase 1	0.012
Oaz3	ornithine decarboxylase antizyme 3	0.012
Ets1	v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)	0.012
Zfp238	zinc finger protein 238	0.012
Ptp4a2	protein tyrosine phosphatase 4a2	0.012
Ppp3r1	protein phosphatase 3, regulatory subunit B, alpha isoform	0.012
Gfi1	growth factor independent 1 transcription repressor	0.012
Pde3a	phosphodiesterase 3A, cGMP inhibited	0.012
Ndst1	N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1	0.012
Cugbp2	CUG triplet repeat, RNA binding protein 2	0.012
Acpp	acid phosphatase, prostate	0.012
Cacna1g	calcium channel, voltage-dependent, T type, alpha 1G subunit	0.012
Fgfr4	fibroblast growth factor receptor 4	0.012
Hand2	heart and neural crest derivatives expressed 2	0.012
Cyfip1	cytoplasmic FMR1 interacting protein 1	0.012
Ier3	immediate early response 3	0.012
Arl5a	ADP-ribosylation factor-like 5A	0.012
Gja5	gap junction protein, alpha 5	0.012
Palm	paralemmin	0.012
Ntf3	neurotrophin 3	0.012
Gabrr3	gamma-aminobutyric acid (GABA) receptor, rho 3	0.012
Hoxb7	homeo box B7	0.012
Pla2g4a	phospholipase A2, group IVA (cytosolic, calcium-dependent)	0.012
Myc	myelocytomatosis oncogene	0.012
B3gat1	beta-1,3-glucuronyltransferase 1 (glucuronosyltransferase P)	0.012
Gabra1	gamma-aminobutyric acid (GABA) A receptor, alpha 1	0.012
LOC100363783	rCG53773-like	0.012
Nr5a1	nuclear receptor subfamily 5, group A, member 1	0.012
Rest	RE1-silencing transcription factor	0.012
Fkbp4	FK506 binding protein 4	0.012
Atp2b3	ATPase, Ca++ transporting, plasma membrane 3	0.011
Prph2	peripherin 2	0.011
Foxa3	forkhead box A3	0.011
Plaur	plasminogen activator, urokinase receptor	0.011
Map3k1	mitogen activated protein kinase kinase kinase 1	0.011
Accn2	amiloride-sensitive cation channel 2, neuronal	0.011
Cyp2d4	cytochrome P450, family 2, subfamily d, polypeptide 4	0.011
Map3k3	mitogen activated protein kinase kinase kinase 3	0.011
Cd86	CD86 molecule	0.011
Dchs1	dachsous 1 (Drosophila)	0.011
Dspp	dentin sialophosphoprotein	0.011
Bcl3	B-cell CLL/lymphoma 3	0.011
Ralgds	ral guanine nucleotide dissociation stimulator	0.011
Gabrr2	gamma-aminobutyric acid (GABA) receptor, rho 2	0.011
Ch25h	cholesterol 25-hydroxylase	0.011
Sp1	Sp1 transcription factor	0.011
Psmc3	proteasome (prosome, macropain) 26S subunit, ATPase 3	0.011
Irs1	insulin receptor substrate 1	0.011
Ncor1	nuclear receptor co-repressor 1	0.011
Adrb1	adrenergic, beta-1-, receptor	0.011
Smarca4	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4	0.011	Human
Tle4	transducin-like enhancer of split 4 (E(sp1) homolog, Drosophila)	0.011
Nfkb2	nuclear factor of kappa light polypeptide gene enhancer in B-cells 2, p49/p100	0.011
Meox2	mesenchyme homeobox 2	0.011
Tshr	thyroid stimulating hormone receptor	0.011
Fn3k	fructosamine 3 kinase	0.011
Sbno2	strawberry notch homolog 2 (Drosophila)	0.011
Iqgap1	IQ motif containing GTPase activating protein 1	0.011
Calhm2	calcium homeostasis modulator 2	0.011
Fat2	FAT tumor suppressor homolog 2 (Drosophila)	0.011
Myh1	myosin, heavy polypeptide 1, skeletal muscle, adult	0.011
Ece1	endothelin converting enzyme 1	0.011
RGD1564664	similar to LOC387763 protein	0.011
Ctnnd2	catenin (cadherin-associated protein), delta 2 (neural plakophilin-related arm-repeat protein)	0.011
Acvr2a	activin A receptor, type IIA	0.011
Slc26a2	solute carrier family 26 (sulfate transporter), member 2	0.011
Chrna3	cholinergic receptor, nicotinic, alpha 3	0.011
Fgf17	fibroblast growth factor 17	0.011
Rnf10	ring finger protein 10	0.011
Sell	selectin L	0.011
Plod2	procollagen lysine, 2-oxoglutarate 5-dioxygenase 2	0.011
Klk1l	kallikrein 1-like peptidase	0.011
Foxc2	forkhead box C2	0.011
Hif1a	hypoxia-inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)	0.011
Gnb2	guanine nucleotide binding protein (G protein), beta polypeptide 2	0.011
Rassf1	Ras association (RalGDS/AF-6) domain family member 1	0.011
Htr1a	5-hydroxytryptamine (serotonin) receptor 1A	0.011
RGD1304644	similar to RIKEN cDNA 2310046K01	0.011
Plau	plasminogen activator, urokinase	0.011
Itgam	integrin, alpha M	0.011
Ldhc	lactate dehydrogenase C	0.011
Myo1e	myosin IE	0.011
Nab1	Ngfi-A binding protein 1	0.011
Plcg2	phospholipase C, gamma 2	0.011
Sfpq	splicing factor proline/glutamine rich (polypyrimidine tract binding protein associated)	0.011
Nr5a2	nuclear receptor subfamily 5, group A, member 2	0.010
Stat1	signal transducer and activator of transcription 1	0.010
Jun	Jun oncogene	0.010
Gpha2	glycoprotein hormone alpha 2	0.010
Crip2	cysteine-rich protein 2	0.010
Lphn1	latrophilin 1	0.010
P2rx3	purinergic receptor P2X, ligand-gated ion channel, 3	0.010
Ugt2a1	UDP glucuronosyltransferase 2 family, polypeptide A1	0.010
Tacr2	tachykinin receptor 2	0.010
Wdr26	WD repeat domain 26	0.010
Slc6a3	solute carrier family 6 (neurotransmitter transporter, dopamine), member 3	0.010
Acrv1	acrosomal vesicle protein 1	0.010
Ccl2	chemokine (C-C motif) ligand 2	0.010
Ifrd1	interferon-related developmental regulator 1	0.010
Lst1	leukocyte specific transcript 1	0.010
Egr3	early growth response 3	0.010
Acox2	acyl-Coenzyme A oxidase 2, branched chain	0.010
Cdc34	cell division cycle 34 homolog (S. cerevisiae)	0.010
Hsd17b1	hydroxysteroid (17-beta) dehydrogenase 1	0.010
Lgals3	lectin, galactoside-binding, soluble, 3	0.010
Psmb7	proteasome (prosome, macropain) subunit, beta type 7	0.010
Flnb	filamin, beta	0.010
Parp9	poly (ADP-ribose) polymerase family, member 9	0.010
Vegfb	vascular endothelial growth factor B	0.010
Rps6ka1	ribosomal protein S6 kinase polypeptide 1	0.010
Tp53	tumor protein p53	0.010
Nrp2	neuropilin 2	0.010
Grik5	glutamate receptor, ionotropic, kainate 5	0.010
Psmd13	proteasome (prosome, macropain) 26S subunit, non-ATPase, 13	0.010
Mst1	Macrophage stimulating 1 (hepatocyte growth factor-like)	0.010
Gadd45a	growth arrest and DNA-damage-inducible, alpha	0.010
Slc22a25	solute carrier family 22, member 25	0.010
Atp1b2	ATPase, Na+/K+ transporting, beta 2 polypeptide	0.010
Pou2f2	POU class 2 homeobox 2	0.010
Slc5a1	solute carrier family 5 (sodium/glucose cotransporter), member 1	0.010
Pdpn	podoplanin	0.010
Il13ra1	interleukin 13 receptor, alpha 1	0.010
Klf5	Kruppel-like factor 5	0.010
Gas7	growth arrest specific 7	0.010
Rbpj	recombination signal binding protein for immunoglobulin kappa J region	0.010
Robo2	roundabout homolog 2 (Drosophila)	0.010
Ldb1	LIM domain binding 1	0.010
Rabep2	rabaptin, RAB GTPase binding effector protein 2	0.010
Vcan	versican	0.010
Fam46a	family with sequence similarity 46, member A	0.010
Esyt1	extended synaptotagmin-like protein 1	0.010