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Process View

Danio rerio

8 genes annotated in zebrafish

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axial mesoderm morphogenesis

GO:0048319

The process in which the anatomical structures of the axial mesoderm are generated and organized.

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Known genes in the process in zebrafish Include functional analogs

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Gene Predictions

Click on a gene's description to view its network relationships with genes known to be involved in "axial mesoderm morphogenesis"

Show only novel predictions Show only unknown genes Highlight genes with functional analogs involved in "axial mesoderm morphogenesis" (in gray)

Name	Description	Probability	Func Analog Organism
flh	floating head	0.850
pax2a	paired box gene 2a	0.811
ntla	no tail a	0.802
eya1	eyes absent homolog 1	0.536
oep	one-eyed pinhead	0.454
foxa3	forkhead box A3	0.443
sox10	SRY-box containing gene 10	0.344
lmx1b.1	LIM homeobox transcription factor 1, beta 1	0.330
shha	sonic hedgehog a	0.308
foxi3a	forkhead box I3a	0.264	Zebrafish
rerea	arginine-glutamic acid dipeptide (RE) repeats a	0.256
chd	chordin	0.247
ndr2	nodal-related 2	0.231
crb2a	crumbs homolog 2a	0.203
dharma	dharma	0.176
mpp5a	membrane protein, palmitoylated 5a (MAGUK p55 subfamily member 5a)	0.170
cdx4	caudal type homeo box transcription factor 4	0.156
foxi3b	forkhead box I3b	0.154	Zebrafish
wnt11	wingless-type MMTV integration site family, member 11	0.134
sox2	SRY-box containing gene 2	0.130
atp1a1a.4	ATPase, Na+/K+ transporting, alpha 1a.4 polypeptide	0.126
pax6b	paired box gene 6b	0.098
zgc:194131	zgc:194131	0.097
notch1a	notch homolog 1a	0.086
atoh7	atonal homolog 7	0.085
neurod	neurogenic differentiation	0.078
otx1b	orthodenticle homolog 1b	0.078
mib	mind bomb	0.074
tfe3b	transcription factor binding to IGHM enhancer 3b	0.074
foxa2	forkhead box A2	0.072
ass1	argininosuccinate synthetase 1	0.068
pou5f1	POU domain, class 5, transcription factor 1	0.059
gata5	GATA-binding protein 5	0.057
jag1b	jagged 1b	0.055
rx3	retinal homeobox gene 3	0.054
dld	deltaD	0.053
slc4a1b	solute carrier family 4, anion exchanger, member 1b	0.051
szl	sizzled	0.051
fgf8a	fibroblast growth factor 8 a	0.047
gli1	GLI-Kruppel family member 1	0.046
cldn5a	claudin 5a	0.046
foxc1a	forkhead box C1a	0.044
gata3	GATA-binding protein 3	0.040
bmpr1aa	bone morphogenetic protein receptor, type 1aa	0.040
foxi1	forkhead box I1	0.040	Zebrafish
bmper	BMP binding endothelial regulator	0.038
vasn	vasorin	0.038
nkx2.2b	NK2 transcription factor related 2b	0.038
krt4	keratin 4	0.036
vasa	vasa homolog	0.035
dact2	dapper homolog 2, antagonist of beta-catenin (xenopus)	0.035
wnt7bb	wingless-type MMTV integration site family, member 7Bb	0.034
pkp3	plakophilin 3	0.034
vsx2	visual system homeobox 2	0.034	Zebrafish
dlc	deltaC	0.033
fn1	fibronectin 1	0.031
fzd10	frizzled homolog 10	0.031
spns2	spinster homolog 2 (Drosophila)	0.030
dao.2	D-amino-acid oxidase 2	0.029
cdh1	cadherin 1, epithelial	0.028	Zebrafish
sox32	SRY-box containing gene 32	0.028
fzd8a	frizzled homolog 8a	0.027
hnf1ba	HNF1 homeobox Ba	0.027
cdh2	cadherin 2, neuronal	0.026
tp63	tumor protein p63	0.026
hlxb9la	homeo box HB9 like a	0.025
grhl2b	grainyhead-like 2b (Drosophila)	0.023
nrarpa	notch-regulated ankyrin repeat protein a	0.022
fgf3	fibroblast growth factor 3	0.022
six4b	sine oculis homeobox homolog 4b	0.022
gata2a	GATA-binding protein 2a	0.021
nr2e3	nuclear receptor subfamily 2, group E, member 3	0.021
axin1	axin 1	0.021	Mouse
smarca4	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4	0.020
lhx1a	LIM homeobox 1a	0.020
nr2f5	nuclear receptor subfamily 2, group F, member 5	0.019
adipor2	adiponectin receptor 2	0.018
atp1a1a.2	ATPase, Na+/K+ transporting, alpha 1a.2 polypeptide	0.018
supt6h	suppressor of Ty 6 homolog	0.018
nr2e1	nuclear receptor subfamily 2, group E, member 1	0.018
nrf1	nuclear respiratory factor 1	0.017
six3a	sine oculis homeobox homolog 3a	0.017
ctsl1b	cathepsin L, 1 b	0.017
sox19a	SRY-box containing gene 19a	0.017
tal2	T-cell acute lymphocytic leukemia 2	0.016
foxa1	forkhead box A1	0.016
lmx1b.2	LIM homeobox transcription factor 1, beta 2	0.016
vwf	von Willebrand factor	0.015
tfa	transferrin-a	0.015
pou1f1	POU domain, class 1, transcription factor 1	0.015
pard6gb	par-6 partitioning defective 6 homolog gamma B (C. elegans)	0.015
vsx1	visual system homeobox 1 homolog, chx10-like	0.015
ccna1	cyclin A1	0.014
slc7a6	solute carrier family 7 (cationic amino acid transporter, y+ system), member 6	0.014
pitx2	paired-like homeodomain transcription factor 2	0.014
lef1	lymphocyte enhancer binding factor 1	0.013
gbx2	gastrulation brain homeo box 2	0.013
tfap2c	transcription factor AP-2 gamma (activating enhancer binding protein 2 gamma)	0.013
nkx2.3	NK2 transcription factor related 3	0.013
nkx2.1b	NK2 homeobox 1b	0.013
hmx4	H6 family homeobox 4	0.013
adipoql	adiponectin, C1Q and collagen domain containing, like	0.013
dact1	dapper homolog 1, antagonist of beta-catenin (xenopus)	0.013
olig2	oligodendrocyte lineage transcription factor 2	0.012
dzip1	DAZ interacting protein 1	0.012
nog1	noggin 1	0.012
bhlhe22	basic helix-loop-helix family, member e22	0.012
itih2	inter-alpha (globulin) inhibitor H2	0.011
vangl2	vang-like 2 (van gogh, Drosophila)	0.011
dnmt6	DNA (cytosine-5-)-methyltransferase 6	0.011
fbp1b	fructose-1,6-bisphosphatase 1b	0.011
kcnj1	potassium inwardly-rectifying channel, subfamily J, member 1	0.011
pxn	paxillin	0.011
p2rx2	purinergic receptor P2X, ligand-gated ion channel, 2	0.011
foxi2	forkhead box I2	0.010	Zebrafish
dusp6	dual specificity phosphatase 6	0.010
nin	ninein (GSK3B interacting protein)	0.010
sox19b	SRY-box containing gene 19b	0.010
prdm1a	PR domain containing 1a, with ZNF domain	0.010
klhl31	kelch-like 31 (Drosophila)	0.010