IMP

Process View

Mus musculus

6 genes annotated in mouse

paraxial mesoderm formation

The process that gives rise to the paraxial mesoderm. This process pertains to the initial formation of the structure from unspecified parts.

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Known genes in the process in mouse Include functional analogs

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Gene Predictions

Click on a gene's description to view its network relationships with genes known to be involved in "paraxial mesoderm formation"

Show only novel predictions Show only unknown genes Highlight genes with functional analogs involved in "paraxial mesoderm formation" (in gray)

Name	Description	Probability	Func Analog Organism
Pax2	paired box gene 2	0.994
Shh	sonic hedgehog	0.972
Gli3	GLI-Kruppel family member GLI3	0.810
Fgf8	fibroblast growth factor 8	0.736
Ctnnb1	catenin (cadherin associated protein), beta 1	0.719
Fgfr2	fibroblast growth factor receptor 2	0.689
Bmp4	bone morphogenetic protein 4	0.557
Foxc1	forkhead box C1	0.487
Pax8	paired box gene 8	0.466
Tbx1	T-box 1	0.444
Foxc2	forkhead box C2	0.387
Emx2	empty spiracles homolog 2 (Drosophila)	0.326
Pitx2	paired-like homeodomain transcription factor 2	0.288
T	brachyury	0.253
Wnt3a	wingless-related MMTV integration site 3A	0.253
Nkx2-1	NK2 homeobox 1	0.232
Otx2	orthodenticle homolog 2 (Drosophila)	0.229
Lef1	lymphoid enhancer binding factor 1	0.217
Gdnf	glial cell line derived neurotrophic factor	0.208
Gli2	GLI-Kruppel family member GLI2	0.191
Rarg	retinoic acid receptor, gamma	0.169
Pax6	paired box gene 6	0.166
Hoxa1	homeobox A1	0.148
Foxa2	forkhead box A2	0.146	Mouse
Fgfr1	fibroblast growth factor receptor 1	0.133
Pax3	paired box gene 3	0.120
Lhx1	LIM homeobox protein 1	0.114
Dkk1	dickkopf homolog 1 (Xenopus laevis)	0.113
Ror2	receptor tyrosine kinase-like orphan receptor 2	0.105
Msx1	homeobox, msh-like 1	0.104
Gata4	GATA binding protein 4	0.100
Nodal	nodal	0.098
Cldn3	claudin 3	0.085
Smo	smoothened homolog (Drosophila)	0.083
Nog	noggin	0.081
Hoxa2	homeobox A2	0.078
Six1	sine oculis-related homeobox 1 homolog (Drosophila)	0.077
Hand1	heart and neural crest derivatives expressed transcript 1	0.075
Hand2	heart and neural crest derivatives expressed transcript 2	0.072
Twist2	twist homolog 2 (Drosophila)	0.070
Psen1	presenilin 1	0.070
Hoxd11	homeobox D11	0.069
Gata6	GATA binding protein 6	0.065
Sox9	SRY-box containing gene 9	0.064
Tgfb2	transforming growth factor, beta 2	0.063
Tbx2	T-box 2	0.059
Msx2	homeobox, msh-like 2	0.058
Rarb	retinoic acid receptor, beta	0.056
Hoxa10	homeobox A10	0.053
Hmx3	H6 homeobox 3	0.052
Aldh1a2	aldehyde dehydrogenase family 1, subfamily A2	0.052
Hoxa3	homeobox A3	0.050
Tcfap2a	transcription factor AP-2, alpha	0.049
Wnt4	wingless-related MMTV integration site 4	0.049	Mouse
Dlx5	distal-less homeobox 5	0.047
Lmx1b	LIM homeobox transcription factor 1 beta	0.047
Emx1	empty spiracles homolog 1 (Drosophila)	0.046
Wnt1	wingless-related MMTV integration site 1	0.045	Mouse
Prrx1	paired related homeobox 1	0.044
Hoxd3	homeobox D3	0.042
Hoxd9	homeobox D9	0.042
Hoxb6	homeobox B6	0.041
Bmp7	bone morphogenetic protein 7	0.040
Meox2	mesenchyme homeobox 2	0.039
Cdx1	caudal type homeobox 1	0.037
Ihh	Indian hedgehog	0.033
Foxe3	forkhead box E3	0.033	Mouse
Cyp26a1	cytochrome P450, family 26, subfamily a, polypeptide 1	0.033
Foxa1	forkhead box A1	0.032	Mouse
Emid2	EMI domain containing 2	0.030
Hoxb5	homeobox B5	0.029
Bnc1	basonuclin 1	0.028
Efnb2	ephrin B2	0.028
Hmx1	H6 homeobox 1	0.027
Neurog1	neurogenin 1	0.027
Pax1	paired box gene 1	0.027
Tbx3	T-box 3	0.026
Nkx2-5	NK2 transcription factor related, locus 5 (Drosophila)	0.026
Foxb1	forkhead box B1	0.025
Ptk7	PTK7 protein tyrosine kinase 7	0.025
Wnt6	wingless-related MMTV integration site 6	0.025	Mouse
Hoxc8	homeobox C8	0.025
Pbx1	pre B-cell leukemia transcription factor 1	0.024
En1	engrailed 1	0.024
Hoxa4	homeobox A4	0.024
Fzd10	frizzled homolog 10 (Drosophila)	0.023
Foxf2	forkhead box F2	0.023
Mesp1	mesoderm posterior 1	0.022
Gbx2	gastrulation brain homeobox 2	0.021
Onecut1	one cut domain, family member 1	0.021
Pax9	paired box gene 9	0.021
Sox7	SRY-box containing gene 7	0.019
Hoxa9	homeobox A9	0.019
Prrx2	paired related homeobox 2	0.019
Cdx2	caudal type homeobox 2	0.019
Efna4	ephrin A4	0.019
Foxd2	forkhead box D2	0.019	Mouse
Hes1	hairy and enhancer of split 1 (Drosophila)	0.018
Pou3f3	POU domain, class 3, transcription factor 3	0.017
Sox3	SRY-box containing gene 3	0.017
Hoxd13	homeobox D13	0.017
Matn3	matrilin 3	0.017
Mecom	MDS1 and EVI1 complex locus	0.016
Hoxd10	homeobox D10	0.016
Vstm2b	V-set and transmembrane domain containing 2B	0.016
Lmx1a	LIM homeobox transcription factor 1 alpha	0.016
Pitx1	paired-like homeodomain transcription factor 1	0.016
Hoxb9	homeobox B9	0.016
Vax1	ventral anterior homeobox containing gene 1	0.015
Hoxa5	homeobox A5	0.015
Smad6	MAD homolog 6 (Drosophila)	0.015
Alx4	aristaless-like homeobox 4	0.014
Uncx	UNC homeobox	0.014
Hoxb3	homeobox B3	0.014
Nkx6-1	NK6 homeobox 1	0.013
Hoxa13	homeobox A13	0.013
Hsd11b2	hydroxysteroid 11-beta dehydrogenase 2	0.013
Chrd	chordin	0.013
Adra2b	adrenergic receptor, alpha 2b	0.013
Fgfr3	fibroblast growth factor receptor 3	0.013
Lgr4	leucine-rich repeat-containing G protein-coupled receptor 4	0.013
Pcsk5	proprotein convertase subtilisin/kexin type 5	0.012
Otx1	orthodenticle homolog 1 (Drosophila)	0.012
Gli1	GLI-Kruppel family member GLI1	0.012
Eya1	eyes absent 1 homolog (Drosophila)	0.012
Hoxd1	homeobox D1	0.012
Vegfa	vascular endothelial growth factor A	0.012
Tead3	TEA domain family member 3	0.012
Cdkn2a	cyclin-dependent kinase inhibitor 2A	0.011
Wnt9a	wingless-type MMTV integration site 9A	0.011	Mouse
Fgf3	fibroblast growth factor 3	0.011
Hnf1b	HNF1 homeobox B	0.011	Mouse
Amhr2	anti-Mullerian hormone type 2 receptor	0.011
Fgf18	fibroblast growth factor 18	0.011
Tcf21	transcription factor 21	0.011
Foxf1a	forkhead box F1a	0.011
Isl1	ISL1 transcription factor, LIM/homeodomain	0.011
Lhx3	LIM homeobox protein 3	0.011
Pitx3	paired-like homeodomain transcription factor 3	0.010
Foxd3	forkhead box D3	0.010	Mouse
Ptpn14	protein tyrosine phosphatase, non-receptor type 14	0.010
Lrp6	low density lipoprotein receptor-related protein 6	0.010
Ephb2	Eph receptor B2	0.010
Pthlh	parathyroid hormone-like peptide	0.010
Fgf15	fibroblast growth factor 15	0.010