IMP

Process View

Danio rerio

9 genes annotated in zebrafish

regulation of vesicle mediated transport

Any process that modulates the rate, frequency, or extent of vesicle-mediated transport, the directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell.

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Known genes in the process in zebrafish Include functional analogs

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Gene Predictions

Click on a gene's description to view its network relationships with genes known to be involved in "regulation of vesicle mediated transport"

Show only novel predictions Show only unknown genes Highlight genes with functional analogs involved in "regulation of vesicle mediated transport" (in gray)

Name	Description	Probability	Func Analog Organism
wnt10a	wingless-type MMTV integration site family, member 10a	0.399	Zebrafish
mapk1	mitogen-activated protein kinase 1	0.323
rab1a	RAB1A, member RAS oncogene family	0.229
rab5c	RAB5C, member RAS oncogene family	0.211
lmx1b.1	LIM homeobox transcription factor 1, beta 1	0.181
psen1	presenilin 1	0.163
bmp4	bone morphogenetic protein 4	0.153
wnt1	wingless-type MMTV integration site family, member 1	0.136	Zebrafish
islr2	immunoglobulin superfamily containing leucine-rich repeat 2	0.118
capns1b	calpain, small subunit 1 b	0.097
stmn1b	stathmin 1b	0.085
c3b	complement component c3b	0.079
cdh1	cadherin 1, epithelial	0.075
wnt2bb	wingless-type MMTV integration site family, member 2Bb	0.074	Zebrafish
nod1	nucleotide-binding oligomerization domain containing 1	0.074
mib	mind bomb	0.072
ovol1	ovo-like 1 (Drosophila)	0.058
pob	partial optokinetic response b	0.057
LOC557072	caspase recruitment domain-containing protein 11-like	0.052
ephb4a	eph receptor B4a	0.051
notch3	notch homolog 3	0.051
gli1	GLI-Kruppel family member 1	0.048
igfbp3	insulin-like growth factor binding protein 3	0.046
tpm4	tropomyosin 4	0.045
itgb1b	integrin, beta 1b	0.045
hoxa13a	homeo box A13a	0.043
wnt7aa	wingless-type MMTV integration site family, member 7Aa	0.043	Zebrafish
bc2	putative breast adenocarcinoma marker	0.041	Human
anxa1a	annexin A1a	0.041	Human
amotl2a	angiomotin like 2a	0.040
arf2	ADP-ribosylation factor 2	0.039	Worm
zdhhc8b	zinc finger, DHHC-type containing 8b	0.038
etv2	ets variant gene 2	0.038
anxa1b	annexin A1b	0.038	Human
gdnf	glial cell derived neurotrophic factor	0.037
jag2	jagged 2	0.036
si:ch211-157f15.1	si:ch211-157f15.1	0.036
ippk	inositol 1,3,4,5,6-pentakisphosphate 2-kinase	0.035
calcrla	calcitonin receptor-like a	0.034
capza1a	capping protein (actin filament) muscle Z-line, alpha 1a	0.032
sh3gl1a	SH3-domain GRB2-like 1a	0.032
mtmr8	myotubularin related protein 8	0.032
myl9l	myosin, light polypeptide 9, like	0.031
smox	spermine oxidase	0.030
msna	moesin a	0.029	Fly
pkp1	plakophilin 1	0.028
ap2a1	adaptor-related protein complex 2, alpha 1 subunit	0.027
arpc5a	actin related protein 2/3 complex, subunit 5A	0.026
lndc1	ly6/neurotoxin domain containing 1	0.026
csnk1da	casein kinase 1, delta a	0.025
prkci	protein kinase C, iota	0.025
hnrnpab	heterogeneous nuclear ribonucleoprotein A/B	0.025
sema3h	semaphorin 3h	0.025
rap2ip	Rap2 interacting protein	0.024
cd9b	CD9 antigen, b	0.024
ilk	integrin linked kinase	0.023
svil	supervillin	0.023
pycard	PYD and CARD domain containing	0.023	Mouse
sbf1	SET binding factor 1	0.023
elovl5	ELOVL family member 5, elongation of long chain fatty acids (yeast)	0.022
valopa	vertebrate ancient long opsin a	0.022
gnaia	guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide a	0.022
LOC795916	mucolipin-1-like	0.022
hmgb1a	high-mobility group box 1a	0.021
tm9sf2	transmembrane 9 superfamily member 2	0.021
ets1a	v-ets erythroblastosis virus E26 oncogene homolog 1a	0.020
calm3b	calmodulin 3b (phosphorylase kinase, delta)	0.020
prkaa1	protein kinase, AMP-activated, alpha 1 catalytic subunit	0.020	Rat
cd276	CD276 molecule	0.020
nanos3	nanos homolog 3	0.020
vps4b	vacuolar protein sorting 4b (yeast)	0.020
krt5	keratin 5	0.020
wnt9b	wingless-type MMTV integration site family, member 9B	0.020	Zebrafish
si:dkey-222f8.3	si:dkey-222f8.3	0.020
ptenb	phosphatase and tensin homolog B (mutated in multiple advanced cancers 1)	0.019
ywhabl	tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide like	0.019
atp1a3a	ATPase, Na+/K+ transporting, alpha 3a polypeptide	0.019
si:dkeyp-51c11.1	si:dkeyp-51c11.1	0.019
dlat	dihydrolipoamide S-acetyltransferase (E2 component of pyruvate dehydrogenase complex)	0.018
rp42-pen	rp42 homolog (pending) and rp42 homolog	0.018
fn1	fibronectin 1	0.018
snap25a	synaptosome-associated protein 25a	0.018
wnt7bb	wingless-type MMTV integration site family, member 7Bb	0.018
ctnna	catenin (cadherin-associated protein), alpha	0.018
slc30a7	solute carrier family 30 (zinc transporter), member 7	0.018
cltca	clathrin, heavy polypeptide a (Hc)	0.018	Fly
capn9	calpain 9	0.018
mapkapk2a	mitogen-activated protein kinase-activated protein kinase 2a	0.017
appl2	adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 2	0.017
esyt3	extended synaptotagmin-like protein 3	0.017
smad9	MAD homolog 9 (Drosophila)	0.017
fgf17	fibroblast growth factor 17	0.017
LOC566708	FL cytokine receptor-like	0.017
plcg1	phospholipase C, gamma 1	0.017
capn2b	calpain 2, (m/II) large subunit b	0.017
cd82a	CD82 antigen, a	0.017
cacna1da	calcium channel, voltage-dependent, L type, alpha 1D subunit, a	0.017
gsnb	gelsolin b	0.017
fcho2	FCH domain only 2	0.017
ube2v2	ubiquitin-conjugating enzyme E2 variant 2	0.016
zgc:85889	zgc:85889	0.016
f2rl1.2	coagulation factor II (thrombin) receptor-like 1.2	0.016
hug	HuG	0.016
elavl4	ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)	0.016
wnt10b	wingless-type MMTV integration site family, member 10b	0.016	Zebrafish
wnt4a	wingless-type MMTV integration site family, member 4a	0.016	Zebrafish
fli1a	friend leukemia integration 1a	0.016
sec24c	SEC24 family, member C (S. cerevisiae)	0.016
kcnd3	potassium voltage-gated channel, Shal-related subfamily, member 3	0.015
notch1b	notch homolog 1b	0.015	Zebrafish Mouse
znf711	zinc finger protein 711	0.015
si:dkey-236e20.2	si:dkey-236e20.2	0.015
rnf41	ring finger protein 41	0.015
snx1	sorting nexin 1	0.015
osr2	odd-skipped related 2 (Drosophila)	0.014
phf20b	PHD finger protein 20, b	0.014
slc4a2a	solute carrier family 4, anion exchanger, member 2a	0.014
rap1b	RAS related protein 1b	0.014	Mouse
dlc	deltaC	0.014
grhl3	grainyhead-like 3	0.014
zgc:56525	zgc:56525	0.014
fam3c	family with sequence similarity 3, member C	0.014
actr1	ARP1 actin-related protein 1, centractin (yeast)	0.014
tubb5	tubulin, beta 5	0.013
ptpra	protein tyrosine phosphatase, receptor type, A	0.013
zgc:77849	zgc:77849	0.013
perp	PERP, TP53 apoptosis effector	0.013
bsk146	brain specific kinase 146	0.013
lox	lysyl oxidase	0.013
fzd7b	frizzled homolog 7b	0.013
bactin2	bactin2	0.013
map2k2a	mitogen-activated protein kinase kinase 2a	0.013
pgm1	phosphoglucomutase 1	0.013
dkk3	dickkopf homolog 3 (Xenopus laevis)	0.013
snai1a	snail homolog 1a (Drosophila)	0.013
elmo1	engulfment and cell motility 1 (ced-12 homolog, C. elegans)	0.013
ncam2	neural cell adhesion molecule 2	0.013
map2k4b	mitogen-activated protein kinase kinase 4b	0.013
tpd52l2b	tumor protein D52-like 2b	0.013
cyb5b	cytochrome b5 type B	0.012
nudt3a	nudix (nucleoside diphosphate linked moiety X)-type motif 3a	0.012
ptena	phosphatase and tensin homolog A	0.012
epas1b	endothelial PAS domain protein 1b	0.012
aldocb	aldolase C, fructose-bisphosphate, b	0.012
st8sia5	ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 5	0.012
card14	caspase recruitment domain family, member 14	0.012
map2k4a	mitogen-activated protein kinase kinase 4a	0.012
zgc:73225	zgc:73225	0.012
clgn	calmegin	0.012
drd2l	dopamine receptor D2 like	0.012
sept2	septin 2	0.012
cdc42	cell division cycle 42	0.011	Yeast
ubtf	upstream binding transcription factor, RNA polymerase I	0.011
hmgcs1	3-hydroxy-3-methylglutaryl-Coenzyme A synthase 1 (soluble)	0.011
si:dkeyp-98a7.10	si:dkeyp-98a7.10	0.011
gsk3b	glycogen synthase kinase 3 beta	0.011
si:dkey-204a24.2	si:dkey-204a24.2	0.011
tnnt2a	troponin T2a, cardiac	0.011
diras1a	DIRAS family, GTP-binding RAS-like 1a	0.011
zgc:171802	zgc:171802	0.011
hsf1	heat shock transcription factor 1	0.011
pak2a	p21 (CDKN1A)-activated kinase 2a	0.011
pvalb6	parvalbumin 6	0.011
ckbb	creatine kinase, brain b	0.011
sult2st1	sulfotransferase family 2, cytosolic sulfotransferase 1	0.011
rhoaa	ras homolog gene family, member Aa	0.011	Yeast
cldnb	claudin b	0.011
zgc:110333	zgc:110333	0.011
si:ch73-9j13.1	si:ch73-9j13.1	0.011
grin1a	glutamate receptor, ionotropic, N-methyl D-aspartate 1a	0.011
zgc:73142	zgc:73142	0.011
twist1b	twist1b	0.011
rbp4l	retinol binding protein 4, like	0.011
ube2q2	ubiquitin-conjugating enzyme E2Q family member 2	0.010
si:dkeyp-22b2.3	si:dkeyp-22b2.3	0.010
ctnnb1	catenin (cadherin-associated protein), beta 1	0.010
tbx18	T-box 18	0.010
fbln4	fibulin 4	0.010
npb	neuropeptide B	0.010
itgb1a	integrin, beta 1a	0.010
zgc:73134	zgc:73134	0.010	Fly
flt1	fms-related tyrosine kinase 1 (vascular endothelial growth factor/vascular permeability factor receptor)	0.010
zgc:63831	zgc:63831	0.010
zgc:91835	zgc:91835	0.010
tln1	talin 1	0.010
plekhg5a	pleckstrin homology domain containing, family G (with RhoGef domain) member 5a	0.010
zgc:63629	zgc:63629	0.010