IMP

Process View

Rattus norvegicus

29 genes annotated in rat

phospholipid biosynthetic process

The chemical reactions and pathways resulting in the formation of phospholipids, any lipid containing phosphoric acid as a mono- or diester.

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Known genes in the process in rat Include functional analogs

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Gene Predictions

Click on a gene's description to view its network relationships with genes known to be involved in "phospholipid biosynthetic process"

Show only novel predictions Show only unknown genes Highlight genes with functional analogs involved in "phospholipid biosynthetic process" (in gray)

Name	Description	Probability	Func Analog Organism
Fdft1	farnesyl diphosphate farnesyl transferase 1	0.161
Acat3	acetyl-Coenzyme A acetyltransferase 3	0.115
Tff3	trefoil factor 3, intestinal	0.104
Irs1	insulin receptor substrate 1	0.075
Cyp51	cytochrome P450, family 51	0.061
Hmgcs1	3-hydroxy-3-methylglutaryl-Coenzyme A synthase 1 (soluble)	0.057
Rcvrn	recoverin	0.049
Slc5a1	solute carrier family 5 (sodium/glucose cotransporter), member 1	0.045
Fcer2	Fc fragment of IgE, low affinity II, receptor for (CD23)	0.045
Tmem59	transmembrane protein 59	0.037
Clca4	chloride channel accessory 4	0.036
Cd36	CD36 molecule (thrombospondin receptor)	0.035
Mvd	mevalonate (diphospho) decarboxylase	0.034
Mea1	male-enhanced antigen 1	0.034
Nras	neuroblastoma ras oncogene	0.033
Idi1	isopentenyl-diphosphate delta isomerase 1	0.033
Klk8	kallikrein related-peptidase 8	0.033
Olr837	olfactory receptor 837	0.031
Dctn1	dynactin 1	0.031
Ugt2a1	UDP glucuronosyltransferase 2 family, polypeptide A1	0.030
Ush1c	Usher syndrome 1C homolog (human)	0.030
Pcyt2	phosphate cytidylyltransferase 2, ethanolamine	0.030
Aqp7	aquaporin 7	0.029
Edn2	endothelin 2	0.029
Foxe1	forkhead box E1 (thyroid transcription factor 2)	0.029
Obp1f	odorant binding protein I f	0.029
Itm2b	integral membrane protein 2B	0.028
Engase	endo-beta-N-acetylglucosaminidase	0.028
Adipor2	adiponectin receptor 2	0.028
Klrb1a	killer cell lectin-like receptor subfamily B, member 1A	0.028
Atp6v0e2	ATPase, H+ transporting V0 subunit e2	0.027
Thrb	thyroid hormone receptor beta	0.027
Mvk	mevalonate kinase	0.026
Naaladl1	N-acetylated alpha-linked acidic dipeptidase-like 1	0.026
Slc6a8	solute carrier family 6 (neurotransmitter transporter, creatine), member 8	0.025
Gtf2a1	general transcription factor IIA, 1	0.025
Entpd1	ectonucleoside triphosphate diphosphohydrolase 1	0.025
Kcnq3	potassium voltage-gated channel, KQT-like subfamily, member 3	0.025
P2ry4	pyrimidinergic receptor P2Y, G-protein coupled, 4	0.025
Sqle	squalene epoxidase	0.024
Cyp4b1	cytochrome P450, family 4, subfamily b, polypeptide 1	0.024
Npdc1	neural proliferation, differentiation and control, 1	0.024
Padi3	peptidyl arginine deiminase, type III	0.024
Npy5r	neuropeptide Y receptor Y5	0.023
Kcne1	potassium voltage-gated channel, Isk-related family, member 1	0.023
Idh1	isocitrate dehydrogenase 1 (NADP+), soluble	0.023
Rnf123	ring finger protein 123	0.023
Gip	gastric inhibitory polypeptide	0.022
Rab11a	RAB11a, member RAS oncogene family	0.022
Foxc1	forkhead box C1	0.022
Pfn1	profilin 1	0.022
Erbb4	v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)	0.022
Nrap	nebulin-related anchoring protein	0.021
Galnt10	UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 10 (GalNAc-T10)	0.021
Trim3	tripartite motif-containing 3	0.021
Sult1e1	sulfotransferase family 1E, estrogen-preferring, member 1	0.021
Kcnh5	potassium voltage-gated channel, subfamily H (eag-related), member 5	0.021
Ppm1j	protein phosphatase 1J	0.021
Cd5	Cd5 molecule	0.021
Insr	insulin receptor	0.021
Hsd17b12	hydroxysteroid (17-beta) dehydrogenase 12	0.021
Pla2g2c	phospholipase A2, group IIC	0.020	Rat
Kcnk1	potassium channel, subfamily K, member 1	0.020
RGD1566083	similar to hypothetical protein MGC24047	0.020
Cltc	clathrin, heavy chain (Hc)	0.020
Phf7	PHD finger protein 7	0.020
Kcnj5	potassium inwardly-rectifying channel, subfamily J, member 5	0.019
Tmem163	transmembrane protein 163	0.019
Adam2	ADAM metallopeptidase domain 2	0.019
Hspbp1	HSPA binding protein, cytoplasmic cochaperone 1	0.019
Ptp4a1	protein tyrosine phosphatase type IVA, member 1	0.019
Pnpla2	patatin-like phospholipase domain containing 2	0.019
Clu	clusterin	0.018
Igh-6	immunoglobulin heavy chain 6	0.018
Nae1	NEDD8 activating enzyme E1 subunit 1	0.018
Nmu	neuromedin U	0.018
Fgf1	fibroblast growth factor 1	0.018	Rat
Kcnd2	potassium voltage-gated channel, Shal-related subfamily, member 2	0.018
Acmsd	aminocarboxymuconate semialdehyde decarboxylase	0.018
Ap3m1	adaptor-related protein complex 3, mu 1 subunit	0.018
Rer1	RER1 retention in endoplasmic reticulum 1 homolog (S. cerevisiae)	0.018
Tspan3	tetraspanin 3	0.017
Ccdc97	coiled-coil domain containing 97	0.017
Cpt1b	carnitine palmitoyltransferase 1b, muscle	0.017	Human
Tkt	transketolase	0.017
Il1r1	interleukin 1 receptor, type I	0.017
Acot12	acyl-CoA thioesterase 12	0.016
Pex11a	peroxisomal biogenesis factor 11 alpha	0.016
Slc25a1	solute carrier family 25 (mitochondrial carrier, citrate transporter), member 1	0.016
Ltb4r2	leukotriene B4 receptor 2	0.016
Pitpna	phosphatidylinositol transfer protein, alpha	0.016
Usp33	ubiquitin specific peptidase 33	0.016
Dhrs9	dehydrogenase/reductase (SDR family) member 9	0.016
Nr5a2	nuclear receptor subfamily 5, group A, member 2	0.016
Tpc1808	tropic 1808	0.016
Sirt2	sirtuin (silent mating type information regulation 2 homolog) 2 (S. cerevisiae)	0.016
Mapk15	mitogen-activated protein kinase 15	0.016
Ap2m1	adaptor-related protein complex 2, mu 1 subunit	0.016
Phkg1	phosphorylase kinase, gamma 1	0.016
Gper	G protein-coupled estrogen receptor 1	0.016
Cd3d	CD3 molecule, delta	0.016
Gale	UDP-galactose-4-epimerase	0.016
Cela2a	chymotrypsin-like elastase family, member 2A	0.016
RGD1308772	similar to KIAA0564 protein	0.015
Prap1	proline-rich acidic protein 1	0.015
Clcnkb	chloride channel Kb	0.015
Fdps	farnesyl diphosphate synthase (farnesyl pyrophosphate synthetase, dimethylallyltranstransferase, geranyltranstransferase)	0.015
Fgf8	fibroblast growth factor 8	0.015
Syngr1	synaptogyrin 1	0.015
Ifrd1	interferon-related developmental regulator 1	0.015
Mefv	Mediterranean fever	0.015
Trim17	tripartite motif-containing 17	0.015
Nudt8	nudix (nucleoside diphosphate linked moiety X)-type motif 8	0.015
Erbb3	v-erb-b2 erythroblastic leukemia viral oncogene homolog 3 (avian)	0.015
LOC171573	spleen protein 1 precursor	0.015
LOC64038	sertolin	0.015
Pdyn	prodynorphin	0.015
Opn4	opsin 4	0.015
Alas2	aminolevulinate, delta-, synthase 2	0.015
Inhbc	inhibin beta C	0.015
Fnta	farnesyltransferase, CAAX box, alpha	0.015
siat7D	alpha-2,6-sialyltransferase ST6GalNAc IV	0.015
Rab1b	RAB1B, member RAS oncogene family	0.015
Fam108b1	family with sequence similarity 108, member B1	0.014
Ap2s1	adaptor-related protein complex 2, sigma 1 subunit	0.014
Kcng2	potassium voltage-gated channel, subfamily G, member 2	0.014
Mep1b	meprin 1 beta	0.014
Wsb2	WD repeat and SOCS box-containing 2	0.014
Cyb5r3	cytochrome b5 reductase 3	0.014
Tas2r119	taste receptor, type 2, member 119	0.014
Znf654	zinc finger protein 654	0.014
RT1-N3	RT1 class Ib, locus N3	0.014
Slc7a9	solute carrier family 7 (cationic amino acid transporter, y+ system), member 9	0.014
Slc23a1	solute carrier family 23 (nucleobase transporters), member 1	0.014
Rab3b	RAB3B, member RAS oncogene family	0.014
Dbh	dopamine beta-hydroxylase (dopamine beta-monooxygenase)	0.014
Slc22a7	solute carrier family 22 (organic anion transporter), member 7	0.014
Chat	choline acetyltransferase	0.014
Zfr	zinc finger RNA binding protein	0.014
Fbxo3	F-box protein 3	0.014
Mgll	monoglyceride lipase	0.014
Supt3h	suppressor of Ty 3 homolog (S. cerevisiae)	0.014
Tmem72	transmembrane protein 72	0.014
Asgr2	asialoglycoprotein receptor 2	0.014
Ugp2	UDP-glucose pyrophosphorylase 2	0.014
Vsnl1	visinin-like 1	0.014
Gnb2	guanine nucleotide binding protein (G protein), beta polypeptide 2	0.013
Cercam	cerebral endothelial cell adhesion molecule	0.013
Ica1l	islet cell autoantigen 1-like	0.013
Bmpr1a	bone morphogenetic protein receptor, type IA	0.013
Ric8a	resistance to inhibitors of cholinesterase 8 homolog A (C. elegans)	0.013
Znf689	zinc finger protein 689	0.013
Epha2	Eph receptor A2	0.013
Cpxm2	carboxypeptidase X (M14 family), member 2	0.013
Dlc1	deleted in liver cancer 1	0.013
Ppp1ca	protein phosphatase 1, catalytic subunit, alpha isoform	0.013
Camk1	calcium/calmodulin-dependent protein kinase I	0.013
Tmem120a	transmembrane protein 120A	0.013
Pdc	phosducin	0.013
Sc4mol	sterol-C4-methyl oxidase-like	0.013
Sv2c	synaptic vesicle glycoprotein 2c	0.013
Ros1	c-ros oncogene 1 , receptor tyrosine kinase	0.013
Prl8a2	prolactin family 8, subfamily a, member 2	0.013
RGD1309821	similar to KIAA1161 protein	0.013
Itgb7	integrin, beta 7	0.013
Pgam2	phosphoglycerate mutase 2 (muscle)	0.013
Fgf10	fibroblast growth factor 10	0.013	Rat
Cyp2d3	cytochrome P450, family 2, subfamily d, polypeptide 3	0.013
Cdk5	cyclin-dependent kinase 5	0.013
Gpr4	G protein-coupled receptor 4	0.013
Ehhadh	enoyl-Coenzyme A, hydratase/3-hydroxyacyl Coenzyme A dehydrogenase	0.013
Pgrmc1	progesterone receptor membrane component 1	0.013
Pmvk	phosphomevalonate kinase	0.013
Samsn1	SAM domain, SH3 domain and nuclear localization signals, 1	0.012
Ttc34	tetratricopeptide repeat domain 34	0.012
Gabrg1	gamma-aminobutyric acid (GABA) A receptor, gamma 1	0.012
Wisp2	WNT1 inducible signaling pathway protein 2	0.012
Tfec	transcription factor EC	0.012
Gde1	glycerophosphodiester phosphodiesterase 1	0.012
Gsto1	glutathione S-transferase omega 1	0.012
B4galt2	UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 2	0.012
Ugt2b36	UDP glucuronosyltransferase 2 family, polypeptide B36	0.012
Ifng	interferon gamma	0.012
Accn3	amiloride-sensitive cation channel 3	0.012
LOC691259	hypothetical protein LOC691259	0.012
Mprip	myosin phosphatase Rho interacting protein	0.012
Hadhb	hydroxyacyl-Coenzyme A dehydrogenase/3-ketoacyl-Coenzyme A thiolase/enoyl-Coenzyme A hydratase (trifunctional protein), beta subunit	0.012
LOC100233176	hypothetical protein LOC100233176	0.012
Acly	ATP citrate lyase	0.012
Sigmar1	sigma non-opioid intracellular receptor 1	0.012
Adcy10	adenylate cyclase 10 (soluble)	0.012
RGD1305689	similar to DNA segment, Chr 14, ERATO Doi 449, expressed	0.012
Xpnpep2	X-prolyl aminopeptidase (aminopeptidase P) 2, membrane-bound	0.012
Man1a2	mannosidase, alpha, class 1A, member 2	0.012
Pde7b	phosphodiesterase 7B	0.012
Pcsk4	proprotein convertase subtilisin/kexin type 4	0.012
Kifap3	kinesin-associated protein 3	0.012
Mapk8ip2	mitogen-activated protein kinase 8 interacting protein 2	0.012
Hsd17b1	hydroxysteroid (17-beta) dehydrogenase 1	0.012
Hebp1	heme binding protein 1	0.012
Clcn5	chloride channel 5	0.012
Smad6	SMAD family member 6	0.012
Lss	lanosterol synthase (2,3-oxidosqualene-lanosterol cyclase)	0.012
Manea	mannosidase, endo-alpha	0.012
Dio1	deiodinase, iodothyronine, type I	0.012
Foxs1	forkhead box S1	0.012
Slco2a1	solute carrier organic anion transporter family, member 2a1	0.012
Acox2	acyl-Coenzyme A oxidase 2, branched chain	0.012
Sort1	sortilin 1	0.012
Csrp3	cysteine and glycine-rich protein 3	0.012
Stx2	syntaxin 2	0.012
Vax1	ventral anterior homeobox 1	0.012
Asph	aspartate-beta-hydroxylase	0.012
Kcnq2	potassium voltage-gated channel, KQT-like subfamily, member 2	0.011
Gata6	GATA binding protein 6	0.011
Ly6g6e	lymphocyte antigen 6 complex, locus G6E	0.011
Ttc36	tetratricopeptide repeat domain 36	0.011
Itfg2	integrin alpha FG-GAP repeat containing 2	0.011
Kremen1	kringle containing transmembrane protein 1	0.011
Vdr	vitamin D (1,25- dihydroxyvitamin D3) receptor	0.011	Rat
RGD1307722	similar to hypothetical protein MGC20700	0.011
Mak	male germ cell-associated kinase	0.011
Ggnbp2	gametogenetin binding protein 2	0.011
Pdk2	pyruvate dehydrogenase kinase, isozyme 2	0.011
Cyp1a2	cytochrome P450, family 1, subfamily a, polypeptide 2	0.011
Adar	adenosine deaminase, RNA-specific	0.011
Lonp2	lon peptidase 2, peroxisomal	0.011
Fam38b	family with sequence similarity 38, member B	0.011
Obfc2b	oligonucleotide/oligosaccharide-binding fold containing 2B	0.011
C1qbp	complement component 1, q subcomponent binding protein	0.011
Inadl2	InaD-like 2 (Drosophila)	0.011
Vtn	vitronectin	0.011
Ino80b	INO80 complex subunit B	0.011
Olr1362	olfactory receptor 1362	0.011
Lama3	laminin, alpha 3	0.011
Galnt5	UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 5 (GalNAc-T5)	0.011
Lipf	lipase, gastric	0.011
Mrgprf	MAS-related GPR, member F	0.011
Ppp2r4	protein phosphatase 2A activator, regulatory subunit 4	0.011
Slc22a9	solute carrier family 22 (organic anion transporter), member 9	0.011
Tm7sf2	transmembrane 7 superfamily member 2	0.011
Hyal3	hyaluronoglucosaminidase 3	0.011
Ptafr	platelet-activating factor receptor	0.011
Shc3	SHC (Src homology 2 domain containing) transforming protein 3	0.011
Il17d	interleukin 17D	0.011
Vom2r40	vomeronasal 2 receptor, 40	0.011
Abcc8	ATP-binding cassette, subfamily C (CFTR/MRP), member 8	0.011
Adrb1	adrenergic, beta-1-, receptor	0.011
C1d	C1D nuclear receptor co-repressor	0.011
Pc	pyruvate carboxylase	0.011
Fabp4	fatty acid binding protein 4, adipocyte	0.011
Rbck1	RanBP-type and C3HC4-type zinc finger containing 1	0.011
Csnk1g2	casein kinase 1, gamma 2	0.011
Rdh7	retinol dehydrogenase 7	0.011
Dhcr7	7-dehydrocholesterol reductase	0.011
Gfra2	GDNF family receptor alpha 2	0.011
Nrg1	neuregulin 1	0.011
Akt1s1	AKT1 substrate 1 (proline-rich)	0.011
Clic5	chloride intracellular channel 5	0.011
Ky	kyphoscoliosis peptidase	0.011
Bin2	bridging integrator 2	0.011
Ndrg2	N-myc downstream regulated gene 2	0.010
Lmbrd1	LMBR1 domain containing 1	0.010
Pla2r1	phospholipase A2 receptor 1	0.010
Nkx2-5	NK2 transcription factor related, locus 5 (Drosophila)	0.010
RGD1306682	similar to RIKEN cDNA 1810046J19	0.010
Pglyrp1	peptidoglycan recognition protein 1	0.010
Ucn2	urocortin 2	0.010
Kcnj10	potassium inwardly-rectifying channel, subfamily J, member 10	0.010
Mcrs1	microspherule protein 1	0.010
Prl8a9	prolactin family 8, subfamily a, member 9	0.010
Znrf2	zinc and ring finger 2	0.010
Scarf2	scavenger receptor class F, member 2	0.010
LOC680711	hypothetical protein LOC680711	0.010
Mapk8ip1	mitogen-activated protein kinase 8 interacting protein 1	0.010
Slc28a2	solute carrier family 28 (sodium-coupled nucleoside transporter), member 2	0.010
C1galt1	core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase, 1	0.010
LOC100364485	mCG1051031-like	0.010
Crx	cone-rod homeobox	0.010
Insig1	insulin induced gene 1	0.010
Gulo	gulonolactone (L-) oxidase	0.010
Tsc2	tuberous sclerosis 2	0.010
Stk39	serine/threonine kinase 39, STE20/SPS1 homolog (yeast)	0.010
Dyrk1a	dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A	0.010
Park2	Parkinson disease (autosomal recessive, juvenile) 2, parkin	0.010
Kcmf1	potassium channel modulatory factor 1	0.010