IMP

Process View

Homo sapiens

13 genes annotated in human

regulation of transcription elongation from rna polymerase ii promoter

Any process that modulates the frequency, rate or extent of transcription elongation, the extension of an RNA molecule after transcription initiation and promoter clearance by the addition of ribonucleotides, catalyzed by RNA polymerase II.

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Gene Predictions

Click on a gene's description to view its network relationships with genes known to be involved in "regulation of transcription elongation from rna polymerase ii promoter"

Show only novel predictions Show only unknown genes Highlight genes with functional analogs involved in "regulation of transcription elongation from rna polymerase ii promoter" (in gray)

Name	Description	Probability	Func Analog Organism
LEO1	Leo1, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)	0.990
EP300	E1A binding protein p300	0.976
AFF4	AF4/FMR2 family, member 4	0.964
POLR2A	polymerase (RNA) II (DNA directed) polypeptide A, 220kDa	0.895
RTF1	Rtf1, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)	0.893
CTR9	Ctr9, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)	0.879
SMAD2	SMAD family member 2	0.610
PAF1	Paf1, RNA polymerase II associated factor, homolog (S. cerevisiae)	0.578
CREBBP	CREB binding protein	0.539
COBRA1	cofactor of BRCA1	0.379
CDC73	cell division cycle 73, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)	0.326
CNOT2	CCR4-NOT transcription complex, subunit 2	0.295
TCEA1	transcription elongation factor A (SII), 1	0.292	Yeast
SMURF1	SMAD specific E3 ubiquitin protein ligase 1	0.291
SNF8	SNF8, ESCRT-II complex subunit, homolog (S. cerevisiae)	0.202
CNOT8	CCR4-NOT transcription complex, subunit 8	0.198
TH1L	TH1-like (Drosophila)	0.196
TRRAP	transformation/transcription domain-associated protein	0.173
HDAC4	histone deacetylase 4	0.169
SIRT1	sirtuin 1	0.152
TP53	tumor protein p53	0.142
WDR61	WD repeat domain 61	0.141
MLL	myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila)	0.138	Fly
CREB1	cAMP responsive element binding protein 1	0.126
NBN	nibrin	0.107
SMAD3	SMAD family member 3	0.084
NCOA6	nuclear receptor coactivator 6	0.065
CHD8	chromodomain helicase DNA binding protein 8	0.060
KAT2B	K(lysine) acetyltransferase 2B	0.056	Yeast
CTNNB1	catenin (cadherin-associated protein), beta 1, 88kDa	0.056
RNF11	ring finger protein 11	0.054
MLLT1	myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 1	0.052
PSMC1	proteasome (prosome, macropain) 26S subunit, ATPase, 1	0.049
SP1	Sp1 transcription factor	0.041
SUPT5H	suppressor of Ty 5 homolog (S. cerevisiae)	0.041	Yeast Zebrafish
SMAD7	SMAD family member 7	0.037
ATG14	ATG14 autophagy related 14 homolog (S. cerevisiae)	0.035
TP53BP1	tumor protein p53 binding protein 1	0.035
NCOA3	nuclear receptor coactivator 3	0.034
CNOT3	CCR4-NOT transcription complex, subunit 3	0.031	Yeast
HIPK2	homeodomain interacting protein kinase 2	0.029
CCNT1	cyclin T1	0.028
NCOA1	nuclear receptor coactivator 1	0.028
DNMT3B	DNA (cytosine-5-)-methyltransferase 3 beta	0.026
PAXIP1	PAX interacting (with transcription-activation domain) protein 1	0.025
NCOR1	nuclear receptor corepressor 1	0.024
CHD4	chromodomain helicase DNA binding protein 4	0.024
UBR5	ubiquitin protein ligase E3 component n-recognin 5	0.024
CUX1	cut-like homeobox 1	0.024
CSNK2A1	casein kinase 2, alpha 1 polypeptide	0.023
MEF2A	myocyte enhancer factor 2A	0.023	Fly
PSMD10	proteasome (prosome, macropain) 26S subunit, non-ATPase, 10	0.023
HIF1A	hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)	0.023	Rat
RELA	v-rel reticuloendotheliosis viral oncogene homolog A (avian)	0.022
TAF4	TAF4 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 135kDa	0.022
CNOT1	CCR4-NOT transcription complex, subunit 1	0.022	Yeast
YY1	YY1 transcription factor	0.021
HDAC1	histone deacetylase 1	0.021
TCF4	transcription factor 4	0.021
YWHAE	tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide	0.020
TCF12	transcription factor 12	0.019
USP22	ubiquitin specific peptidase 22	0.019
SKI	v-ski sarcoma viral oncogene homolog (avian)	0.019
MED26	mediator complex subunit 26	0.019
CDK9	cyclin-dependent kinase 9	0.018
SMARCA2	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2	0.018
PSMD4	proteasome (prosome, macropain) 26S subunit, non-ATPase, 4	0.018
TLK1	tousled-like kinase 1	0.018
HABP4	hyaluronan binding protein 4	0.018
BECN1	beclin 1, autophagy related	0.018
MDC1	mediator of DNA-damage checkpoint 1	0.017
RAF1	v-raf-1 murine leukemia viral oncogene homolog 1	0.017
PSMC3	proteasome (prosome, macropain) 26S subunit, ATPase, 3	0.017
DYRK1A	dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A	0.016
CNOT7	CCR4-NOT transcription complex, subunit 7	0.016
KDM2A	lysine (K)-specific demethylase 2A	0.016
CHAF1B	chromatin assembly factor 1, subunit B (p60)	0.015
MYC	v-myc myelocytomatosis viral oncogene homolog (avian)	0.015
YWHAQ	tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide	0.014
ATXN7	ataxin 7	0.014
HDAC9	histone deacetylase 9	0.014
UVRAG	UV radiation resistance associated gene	0.014
MYST3	MYST histone acetyltransferase (monocytic leukemia) 3	0.014
CTDP1	CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) phosphatase, subunit 1	0.013
BTG1	B-cell translocation gene 1, anti-proliferative	0.013
MYO6	myosin VI	0.013
PPP2R5C	protein phosphatase 2, regulatory subunit B', gamma	0.013
CABIN1	calcineurin binding protein 1	0.013
TADA2A	transcriptional adaptor 2A	0.013
RUNX1	runt-related transcription factor 1	0.013
SKIL	SKI-like oncogene	0.013
PSMD6	proteasome (prosome, macropain) 26S subunit, non-ATPase, 6	0.012
NR3C1	nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)	0.012
ARID1A	AT rich interactive domain 1A (SWI-like)	0.012
FAM193A	family with sequence similarity 193, member A	0.012
CSNK1D	casein kinase 1, delta	0.012
MEF2C	myocyte enhancer factor 2C	0.012	Fly
CBX5	chromobox homolog 5	0.012
KHDRBS1	KH domain containing, RNA binding, signal transduction associated 1	0.012
AR	androgen receptor	0.011
MARK3	MAP/microtubule affinity-regulating kinase 3	0.011
PSMC2	proteasome (prosome, macropain) 26S subunit, ATPase, 2	0.011
SUPT16H	suppressor of Ty 16 homolog (S. cerevisiae)	0.011	Fly
CDK2	cyclin-dependent kinase 2	0.011
SIN3A	SIN3 homolog A, transcription regulator (yeast)	0.011
CENPT	centromere protein T	0.011
SMURF2	SMAD specific E3 ubiquitin protein ligase 2	0.011
CNOT6	CCR4-NOT transcription complex, subunit 6	0.011	Yeast
FAM190B	family with sequence similarity 190, member B	0.011
TGFBR2	transforming growth factor, beta receptor II (70/80kDa)	0.010
TGFBR1	transforming growth factor, beta receptor 1	0.010