IMP

Process View

Mus musculus

6 genes annotated in mouse

cerebral cortex gabaergic interneuron development

The process whose specific outcome is the progression of a cerebral cortex GABAergic interneuron over time, from initial commitment to its fate, to the fully functional differentiated cell.

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Gene Predictions

Click on a gene's description to view its network relationships with genes known to be involved in "cerebral cortex gabaergic interneuron development"

Show only novel predictions Show only unknown genes Highlight genes with functional analogs involved in "cerebral cortex gabaergic interneuron development" (in gray)

Name	Description	Probability	Func Analog Organism
Pax6	paired box gene 6	0.999
Otx2	orthodenticle homolog 2 (Drosophila)	0.999
Shh	sonic hedgehog	0.994
Gli3	GLI-Kruppel family member GLI3	0.974
Msx1	homeobox, msh-like 1	0.961
Hand1	heart and neural crest derivatives expressed transcript 1	0.950
Pax2	paired box gene 2	0.944
Drd2	dopamine receptor D2	0.944
Emx1	empty spiracles homolog 1 (Drosophila)	0.940
Pax3	paired box gene 3	0.935
Fgf10	fibroblast growth factor 10	0.931
Tcfap2a	transcription factor AP-2, alpha	0.926
Lhx3	LIM homeobox protein 3	0.923	Mouse
Isl1	ISL1 transcription factor, LIM/homeodomain	0.922	Mouse
Fgf8	fibroblast growth factor 8	0.908
Pitx2	paired-like homeodomain transcription factor 2	0.887
Dlx5	distal-less homeobox 5	0.884
Gbx2	gastrulation brain homeobox 2	0.846
Emx2	empty spiracles homolog 2 (Drosophila)	0.813
Six1	sine oculis-related homeobox 1 homolog (Drosophila)	0.788
Lmx1b	LIM homeobox transcription factor 1 beta	0.773	Mouse
Foxg1	forkhead box G1	0.769
Lhx9	LIM homeobox protein 9	0.767	Mouse
Foxc1	forkhead box C1	0.765
Eya1	eyes absent 1 homolog (Drosophila)	0.622
Neurod1	neurogenic differentiation 1	0.592
Ntrk2	neurotrophic tyrosine kinase, receptor, type 2	0.569
Prrx1	paired related homeobox 1	0.558
Alx4	aristaless-like homeobox 4	0.539	Mouse
Alx3	aristaless-like homeobox 3	0.536	Mouse
Hes5	hairy and enhancer of split 5 (Drosophila)	0.513
Adrb1	adrenergic receptor, beta 1	0.466	Mouse
Hand2	heart and neural crest derivatives expressed transcript 2	0.450
Lhx1	LIM homeobox protein 1	0.385	Mouse
Foxc2	forkhead box C2	0.368
Dlx6	distal-less homeobox 6	0.365
Cckbr	cholecystokinin B receptor	0.320
Neurog2	neurogenin 2	0.311
Msx2	homeobox, msh-like 2	0.306
Ascl1	achaete-scute complex homolog 1 (Drosophila)	0.301
Tbx15	T-box 15	0.300
Hoxb1	homeobox B1	0.284
Six3	sine oculis-related homeobox 3 homolog (Drosophila)	0.251
Atoh7	atonal homolog 7 (Drosophila)	0.224
Runx2	runt related transcription factor 2	0.220
Gad2	glutamic acid decarboxylase 2	0.217
Tbx1	T-box 1	0.209
Insm1	insulinoma-associated 1	0.194
Sox9	SRY-box containing gene 9	0.190
Sox2	SRY-box containing gene 2	0.186
Bmp4	bone morphogenetic protein 4	0.184
Nodal	nodal	0.183
Oprm1	opioid receptor, mu 1	0.168
En1	engrailed 1	0.168
Trpc5	transient receptor potential cation channel, subfamily C, member 5	0.151
Nog	noggin	0.146
Slc6a3	solute carrier family 6 (neurotransmitter transporter, dopamine), member 3	0.145
ND6	NADH dehydrogenase subunit 6	0.144
Glra1	glycine receptor, alpha 1 subunit	0.143
Hoxa1	homeobox A1	0.141
Nkx2-2	NK2 transcription factor related, locus 2 (Drosophila)	0.140
Otx1	orthodenticle homolog 1 (Drosophila)	0.138
Nr2e1	nuclear receptor subfamily 2, group E, member 1	0.132
Pdgfra	platelet derived growth factor receptor, alpha polypeptide	0.131
Htr1f	5-hydroxytryptamine (serotonin) receptor 1F	0.129	Mouse
Wt1	Wilms tumor 1 homolog	0.120
Cnr1	cannabinoid receptor 1 (brain)	0.118
Mab21l2	mab-21-like 2 (C. elegans)	0.114
Fgfr2	fibroblast growth factor receptor 2	0.104
Dcc	deleted in colorectal carcinoma	0.102
Cdk5r1	cyclin-dependent kinase 5, regulatory subunit 1 (p35)	0.102
Oprd1	opioid receptor, delta 1	0.095
Zic3	zinc finger protein of the cerebellum 3	0.092
Pnpla2	patatin-like phospholipase domain containing 2	0.089
Sox11	SRY-box containing gene 11	0.088
Hrk	harakiri, BCL2 interacting protein (contains only BH3 domain)	0.087
Adcyap1	adenylate cyclase activating polypeptide 1	0.086
Atp2b2	ATPase, Ca++ transporting, plasma membrane 2	0.082
Dlx2	distal-less homeobox 2	0.080
Fezf2	Fez family zinc finger 2	0.077
Pou4f2	POU domain, class 4, transcription factor 2	0.077
Pparg	peroxisome proliferator activated receptor gamma	0.077
Lhx5	LIM homeobox protein 5	0.076	Mouse
Hoxd13	homeobox D13	0.076
Lhx6	LIM homeobox protein 6	0.076
Nkx2-5	NK2 transcription factor related, locus 5 (Drosophila)	0.072
Nxph1	neurexophilin 1	0.071
Foxd2	forkhead box D2	0.069
Fgf3	fibroblast growth factor 3	0.069
Gsc	goosecoid homeobox	0.067
Chrm1	cholinergic receptor, muscarinic 1, CNS	0.065
Nr5a1	nuclear receptor subfamily 5, group A, member 1	0.064
Bmp7	bone morphogenetic protein 7	0.061
Gsx1	GS homeobox 1	0.060
Gdnf	glial cell line derived neurotrophic factor	0.059
Dkk1	dickkopf homolog 1 (Xenopus laevis)	0.058
Ncan	neurocan	0.058
Phox2b	paired-like homeobox 2b	0.058
Hoxd3	homeobox D3	0.057
Wnt1	wingless-related MMTV integration site 1	0.057
Gria4	glutamate receptor, ionotropic, AMPA4 (alpha 4)	0.057
Wnt3a	wingless-related MMTV integration site 3A	0.056
Kcnq2	potassium voltage-gated channel, subfamily Q, member 2	0.055
Col25a1	collagen, type XXV, alpha 1	0.054
Epha6	Eph receptor A6	0.053
Rspo2	R-spondin 2 homolog (Xenopus laevis)	0.052
Tlx3	T-cell leukemia, homeobox 3	0.051
Ret	ret proto-oncogene	0.051
Pthlh	parathyroid hormone-like peptide	0.051
En2	engrailed 2	0.051
Nkx1-2	NK1 transcription factor related, locus 2 (Drosophila)	0.050
Kl	klotho	0.050
Gria1	glutamate receptor, ionotropic, AMPA1 (alpha 1)	0.050
Vstm2b	V-set and transmembrane domain containing 2B	0.050
Hmx3	H6 homeobox 3	0.049
Pax7	paired box gene 7	0.049
Cntn2	contactin 2	0.048
Cdh10	cadherin 10	0.047
Cbln1	cerebellin 1 precursor protein	0.046
Oprk1	opioid receptor, kappa 1	0.046
Neto1	neuropilin (NRP) and tolloid (TLL)-like 1	0.044
Pou3f2	POU domain, class 3, transcription factor 2	0.044
Cer1	cerberus 1 homolog (Xenopus laevis)	0.043
Dlx1	distal-less homeobox 1	0.043
Hoxc8	homeobox C8	0.041
Grid1	glutamate receptor, ionotropic, delta 1	0.041
Sox3	SRY-box containing gene 3	0.041
Uncx	UNC homeobox	0.040
Hoxd1	homeobox D1	0.039
Pax9	paired box gene 9	0.039
Magel2	melanoma antigen, family L, 2	0.039
Hmx1	H6 homeobox 1	0.038
Hoxa11	homeobox A11	0.038
Tecta	tectorin alpha	0.037
Adra2c	adrenergic receptor, alpha 2c	0.037	Mouse
Onecut1	one cut domain, family member 1	0.036
Sox1	SRY-box containing gene 1	0.036
Kcns2	K+ voltage-gated channel, subfamily S, 2	0.036
Odz2	odd Oz/ten-m homolog 2 (Drosophila)	0.036
Kcnj3	potassium inwardly-rectifying channel, subfamily J, member 3	0.035
Npy2r	neuropeptide Y receptor Y2	0.035
Ncam2	neural cell adhesion molecule 2	0.035
Zic2	zinc finger protein of the cerebellum 2	0.035
Kcnj11	potassium inwardly rectifying channel, subfamily J, member 11	0.035
Gabra1	gamma-aminobutyric acid (GABA) A receptor, subunit alpha 1	0.034
Syt2	synaptotagmin II	0.034
Krt12	keratin 12	0.034
Rrh	retinal pigment epithelium derived rhodopsin homolog	0.033
Kcna2	potassium voltage-gated channel, shaker-related subfamily, member 2	0.033
Zic1	zinc finger protein of the cerebellum 1	0.033
Sstr4	somatostatin receptor 4	0.032
Fgf5	fibroblast growth factor 5	0.032
Chd7	chromodomain helicase DNA binding protein 7	0.031
Gjd2	gap junction protein, delta 2	0.031
Neurog3	neurogenin 3	0.031
Prox1	prospero-related homeobox 1	0.031
Pitx1	paired-like homeodomain transcription factor 1	0.030
Oprl1	opioid receptor-like 1	0.030
Zeb1	zinc finger E-box binding homeobox 1	0.030
Wnt7a	wingless-related MMTV integration site 7A	0.030
Cdh8	cadherin 8	0.030
Emid2	EMI domain containing 2	0.030
Sall3	sal-like 3 (Drosophila)	0.030
Hoxa10	homeobox A10	0.030
Epha8	Eph receptor A8	0.029
Olfr1264	olfactory receptor 1264	0.029
Mmp16	matrix metallopeptidase 16	0.028
Eya4	eyes absent 4 homolog (Drosophila)	0.028
Kcna4	potassium voltage-gated channel, shaker-related subfamily, member 4	0.028
Sim1	single-minded homolog 1 (Drosophila)	0.028
Ptprz1	protein tyrosine phosphatase, receptor type Z, polypeptide 1	0.028
Crhr1	corticotropin releasing hormone receptor 1	0.027
Six4	sine oculis-related homeobox 4 homolog (Drosophila)	0.027
Prrx2	paired related homeobox 2	0.027
Lef1	lymphoid enhancer binding factor 1	0.026
Oca2	oculocutaneous albinism II	0.026
Dcx	doublecortin	0.026
Evx1	even skipped homeotic gene 1 homolog	0.026
Alx1	ALX homeobox 1	0.025	Mouse
Hoxa2	homeobox A2	0.025
Chrna4	cholinergic receptor, nicotinic, alpha polypeptide 4	0.024
Gabra2	gamma-aminobutyric acid (GABA) A receptor, subunit alpha 2	0.024
Neurod2	neurogenic differentiation 2	0.024
Nrg3	neuregulin 3	0.024
Htr1d	5-hydroxytryptamine (serotonin) receptor 1D	0.024	Mouse
Cntn4	contactin 4	0.024	Mouse
Gria2	glutamate receptor, ionotropic, AMPA2 (alpha 2)	0.024
Chl1	cell adhesion molecule with homology to L1CAM	0.024
Ptprn2	protein tyrosine phosphatase, receptor type, N polypeptide 2	0.024
Nhlh1	nescient helix loop helix 1	0.024
Grm1	glutamate receptor, metabotropic 1	0.024
Lbx1	ladybird homeobox homolog 1 (Drosophila)	0.024
Myod1	myogenic differentiation 1	0.023
Gabrb2	gamma-aminobutyric acid (GABA) A receptor, subunit beta 2	0.023
Adra2b	adrenergic receptor, alpha 2b	0.023	Mouse
Hoxa4	homeobox A4	0.023
Cux2	cut-like homeobox 2	0.023
Rarb	retinoic acid receptor, beta	0.023
Csmd1	CUB and Sushi multiple domains 1	0.023
Calb1	calbindin 1	0.023
Cacng5	calcium channel, voltage-dependent, gamma subunit 5	0.023
Lmx1a	LIM homeobox transcription factor 1 alpha	0.022	Mouse
Chrd	chordin	0.022
Zp1	zona pellucida glycoprotein 1	0.022
Ednra	endothelin receptor type A	0.022
Myt1	myelin transcription factor 1	0.022
Ptf1a	pancreas specific transcription factor, 1a	0.022
Pgr	progesterone receptor	0.021
Hrh1	histamine receptor H1	0.021
Wnt9b	wingless-type MMTV integration site 9B	0.021
Htr7	5-hydroxytryptamine (serotonin) receptor 7	0.021
Gpr50	G-protein-coupled receptor 50	0.021
Slc16a8	solute carrier family 16 (monocarboxylic acid transporters), member 8	0.021
Smo	smoothened homolog (Drosophila)	0.021
Ntsr1	neurotensin receptor 1	0.021
Vsx2	visual system homeobox 2	0.020	Mouse
Kcnab3	potassium voltage-gated channel, shaker-related subfamily, beta member 3	0.020
Rtbdn	retbindin	0.020
Tyr	tyrosinase	0.020
Elavl2	ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu antigen B)	0.020
Epha5	Eph receptor A5	0.020
Sez6	seizure related gene 6	0.020
Caln1	calneuron 1	0.020
Col19a1	collagen, type XIX, alpha 1	0.020
Gpr12	G-protein coupled receptor 12	0.019
Chrna7	cholinergic receptor, nicotinic, alpha polypeptide 7	0.019
Btn1a1	butyrophilin, subfamily 1, member A1	0.019
Cdkn2a	cyclin-dependent kinase inhibitor 2A	0.019
Rb1	retinoblastoma 1	0.019
Bnc1	basonuclin 1	0.019
Ebf3	early B-cell factor 3	0.019
Alk	anaplastic lymphoma kinase	0.019
Col4a3	collagen, type IV, alpha 3	0.019
Olfr70	olfactory receptor 70	0.019
Sstr3	somatostatin receptor 3	0.018
Pax1	paired box gene 1	0.018
Hcn1	hyperpolarization-activated, cyclic nucleotide-gated K+ 1	0.018
Kcnj5	potassium inwardly-rectifying channel, subfamily J, member 5	0.018
Kcnj6	potassium inwardly-rectifying channel, subfamily J, member 6	0.018
Tcfap2c	transcription factor AP-2, gamma	0.018
Hpca	hippocalcin	0.018
Bmp2	bone morphogenetic protein 2	0.018
T	brachyury	0.018
Tac2	tachykinin 2	0.017
Tll1	tolloid-like	0.017
Fam184b	family with sequence similarity 184, member B	0.017
Sspo	SCO-spondin	0.017
Six6	sine oculis-related homeobox 6 homolog (Drosophila)	0.017
Drd4	dopamine receptor D4	0.017	Mouse
Neurog1	neurogenin 1	0.017
Adrb2	adrenergic receptor, beta 2	0.017	Mouse
Grm8	glutamate receptor, metabotropic 8	0.016
Neurod4	neurogenic differentiation 4	0.016
Col22a1	collagen, type XXII, alpha 1	0.016
Gfra1	glial cell line derived neurotrophic factor family receptor alpha 1	0.016
Pou3f3	POU domain, class 3, transcription factor 3	0.016
Ambn	ameloblastin	0.016
Mab21l1	mab-21-like 1 (C. elegans)	0.016
Zfr2	zinc finger RNA binding protein 2	0.016
Slc32a1	solute carrier family 32 (GABA vesicular transporter), member 1	0.016
Celf4	CUGBP, Elav-like family member 4	0.016
Esr1	estrogen receptor 1 (alpha)	0.015
Spock1	sparc/osteonectin, cwcv and kazal-like domains proteoglycan 1	0.015
Olfr71	olfactory receptor 71	0.015
Tgfb2	transforming growth factor, beta 2	0.015
Gpr3	G-protein coupled receptor 3	0.015
Ryr3	ryanodine receptor 3	0.015
Dab1	disabled homolog 1 (Drosophila)	0.015
Kcne2	potassium voltage-gated channel, Isk-related subfamily, gene 2	0.014
Tectb	tectorin beta	0.014
Pou3f1	POU domain, class 3, transcription factor 1	0.014
Gucy2e	guanylate cyclase 2e	0.014
Kcna1	potassium voltage-gated channel, shaker-related subfamily, member 1	0.014
Sox10	SRY-box containing gene 10	0.014
Sema5b	sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5B	0.014
Robo3	roundabout homolog 3 (Drosophila)	0.014
Htr5a	5-hydroxytryptamine (serotonin) receptor 5A	0.014	Mouse
Cacna1b	calcium channel, voltage-dependent, N type, alpha 1B subunit	0.014
Kif5a	kinesin family member 5A	0.013
Hapln1	hyaluronan and proteoglycan link protein 1	0.013
Hoxd11	homeobox D11	0.013
Zfhx4	zinc finger homeodomain 4	0.013
Pbx1	pre B-cell leukemia transcription factor 1	0.013
Theg	testicular haploid expressed gene	0.013
Clcnka	chloride channel Ka	0.013
Nrip3	nuclear receptor interacting protein 3	0.013
Gata4	GATA binding protein 4	0.013
Zic4	zinc finger protein of the cerebellum 4	0.013
Cdkn1b	cyclin-dependent kinase inhibitor 1B	0.013
Trpm1	transient receptor potential cation channel, subfamily M, member 1	0.013
Adrb3	adrenergic receptor, beta 3	0.013	Mouse
Mmp24	matrix metallopeptidase 24	0.013
Prop1	paired like homeodomain factor 1	0.013
Klk4	kallikrein related-peptidase 4 (prostase, enamel matrix, prostate)	0.013
Pitx3	paired-like homeodomain transcription factor 3	0.013
Bhlhe22	basic helix-loop-helix family, member e22	0.013
Car10	carbonic anhydrase 10	0.013
Syt7	synaptotagmin VII	0.012
Pdx1	pancreatic and duodenal homeobox 1	0.012
Hcrt	hypocretin	0.012
Angpt4	angiopoietin 4	0.012
Trp63	transformation related protein 63	0.012
Mc3r	melanocortin 3 receptor	0.012
Csf3	colony stimulating factor 3 (granulocyte)	0.012
Cntnap4	contactin associated protein-like 4	0.012
Gabrb1	gamma-aminobutyric acid (GABA) A receptor, subunit beta 1	0.012
Aff2	AF4/FMR2 family, member 2	0.012
Pde6a	phosphodiesterase 6A, cGMP-specific, rod, alpha	0.012
Jph3	junctophilin 3	0.012
Sprr2f	small proline-rich protein 2F	0.012
Tbr1	T-box brain gene 1	0.012
Igdcc3	immunoglobulin superfamily, DCC subclass, member 3	0.012
Pcsk5	proprotein convertase subtilisin/kexin type 5	0.012
Pax8	paired box gene 8	0.011
Synpr	synaptoporin	0.011
Fgf4	fibroblast growth factor 4	0.011
Scrt2	scratch homolog 2, zinc finger protein (Drosophila)	0.011
Vax1	ventral anterior homeobox containing gene 1	0.011
Kcnd3	potassium voltage-gated channel, Shal-related family, member 3	0.011
Slc18a3	solute carrier family 18 (vesicular monoamine), member 3	0.011
Dlx4	distal-less homeobox 4	0.011
Unc5c	unc-5 homolog C (C. elegans)	0.011
Mas1	MAS1 oncogene	0.011
F2rl2	coagulation factor II (thrombin) receptor-like 2	0.011
Kcnj4	potassium inwardly-rectifying channel, subfamily J, member 4	0.011
Sebox	SEBOX homeobox	0.011
Cntn3	contactin 3	0.011	Mouse
Tacr3	tachykinin receptor 3	0.011
Gabrg3	gamma-aminobutyric acid (GABA) A receptor, subunit gamma 3	0.011
Rnf112	ring finger protein 112	0.011
Tnfsf11	tumor necrosis factor (ligand) superfamily, member 11	0.011
Lepr	leptin receptor	0.011
Adarb2	adenosine deaminase, RNA-specific, B2	0.010
Foxd1	forkhead box D1	0.010
Sstr2	somatostatin receptor 2	0.010
Arnt2	aryl hydrocarbon receptor nuclear translocator 2	0.010
Cdk5r2	cyclin-dependent kinase 5, regulatory subunit 2 (p39)	0.010
Foxn1	forkhead box N1	0.010
Khdrbs2	KH domain containing, RNA binding, signal transduction associated 2	0.010
Hoxb7	homeobox B7	0.010
Htr2c	5-hydroxytryptamine (serotonin) receptor 2C	0.010	Mouse
Krt84	keratin 84	0.010
Grik3	glutamate receptor, ionotropic, kainate 3	0.010
Kcnd2	potassium voltage-gated channel, Shal-related family, member 2	0.010