IMP

Process View

Mus musculus

3 genes annotated in mouse

regulation of rhodopsin gene expression

Any process that modulates the frequency, rate or extent of rhodopsin gene expression. This includes transcriptional, translational, or posttranslational regulation.

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Known genes in the process in mouse Include functional analogs

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Gene Predictions

Click on a gene's description to view its network relationships with genes known to be involved in "regulation of rhodopsin gene expression"

Show only novel predictions Show only unknown genes Highlight genes with functional analogs involved in "regulation of rhodopsin gene expression" (in gray)

Name	Description	Probability	Func Analog Organism
Otx2	orthodenticle homolog 2 (Drosophila)	1.000	Fly
Pax6	paired box gene 6	1.000
Emx2	empty spiracles homolog 2 (Drosophila)	0.999
Emx1	empty spiracles homolog 1 (Drosophila)	0.999
Pax2	paired box gene 2	0.999
Otx1	orthodenticle homolog 1 (Drosophila)	0.995	Fly
Shh	sonic hedgehog	0.961
Gbx2	gastrulation brain homeobox 2	0.842
En1	engrailed 1	0.790
Pou4f2	POU domain, class 4, transcription factor 2	0.742
Gli3	GLI-Kruppel family member GLI3	0.668
Isl1	ISL1 transcription factor, LIM/homeodomain	0.631
Six1	sine oculis-related homeobox 1 homolog (Drosophila)	0.631
Lhx1	LIM homeobox protein 1	0.569
Sox2	SRY-box containing gene 2	0.538
Lmx1b	LIM homeobox transcription factor 1 beta	0.524
Chd7	chromodomain helicase DNA binding protein 7	0.518
Neurod1	neurogenic differentiation 1	0.364
Foxc1	forkhead box C1	0.320
Msx2	homeobox, msh-like 2	0.260
Foxg1	forkhead box G1	0.253
Fgf8	fibroblast growth factor 8	0.252
Rho	rhodopsin	0.229
Hes1	hairy and enhancer of split 1 (Drosophila)	0.217
Lmx1a	LIM homeobox transcription factor 1 alpha	0.203
Neurog2	neurogenin 2	0.190
Neurod4	neurogenic differentiation 4	0.183
Serpine1	serine (or cysteine) peptidase inhibitor, clade E, member 1	0.163
Ascl1	achaete-scute complex homolog 1 (Drosophila)	0.150
Zfp36	zinc finger protein 36	0.141
Rarg	retinoic acid receptor, gamma	0.129
Prph2	peripherin 2	0.124
Dcx	doublecortin	0.122
Fgfr2	fibroblast growth factor receptor 2	0.121
Pax3	paired box gene 3	0.121
En2	engrailed 2	0.117
Bdnf	brain derived neurotrophic factor	0.110
Reln	reelin	0.104
Pde6b	phosphodiesterase 6B, cGMP, rod receptor, beta polypeptide	0.099
Junb	Jun-B oncogene	0.095
Lhx2	LIM homeobox protein 2	0.090
Pitx2	paired-like homeodomain transcription factor 2	0.090
Sox11	SRY-box containing gene 11	0.084
Crx	cone-rod homeobox containing gene	0.081	Fly
Cebpb	CCAAT/enhancer binding protein (C/EBP), beta	0.080
Hes5	hairy and enhancer of split 5 (Drosophila)	0.077
Tcfap2a	transcription factor AP-2, alpha	0.076
Dclk1	doublecortin-like kinase 1	0.074
Eya1	eyes absent 1 homolog (Drosophila)	0.072
Six3	sine oculis-related homeobox 3 homolog (Drosophila)	0.068
Rarb	retinoic acid receptor, beta	0.067
Nr2e1	nuclear receptor subfamily 2, group E, member 1	0.066	Mouse
Atf3	activating transcription factor 3	0.065
Ppp1r15a	protein phosphatase 1, regulatory (inhibitor) subunit 15A	0.065
Hoxa1	homeobox A1	0.061
Mycn	v-myc myelocytomatosis viral related oncogene, neuroblastoma derived (avian)	0.061
Foxc2	forkhead box C2	0.055
Tulp1	tubby like protein 1	0.055
Lhx5	LIM homeobox protein 5	0.051
Pvr	poliovirus receptor	0.051
Hoxb2	homeobox B2	0.051
Lrat	lecithin-retinol acyltransferase (phosphatidylcholine-retinol-O-acyltransferase)	0.050
Eomes	eomesodermin homolog (Xenopus laevis)	0.049
Tbx1	T-box 1	0.046
Mab21l1	mab-21-like 1 (C. elegans)	0.046
Hes3	hairy and enhancer of split 3 (Drosophila)	0.045
Pou4f1	POU domain, class 4, transcription factor 1	0.044
Jun	Jun oncogene	0.043
Wnt9b	wingless-type MMTV integration site 9B	0.042
Mafk	v-maf musculoaponeurotic fibrosarcoma oncogene family, protein K (avian)	0.040	Mouse
Wnt1	wingless-related MMTV integration site 1	0.040
Bmp4	bone morphogenetic protein 4	0.039
Smo	smoothened homolog (Drosophila)	0.037
Ndst1	N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1	0.037
Fosl2	fos-like antigen 2	0.033
Tnfrsf12a	tumor necrosis factor receptor superfamily, member 12a	0.032
C1qtnf5	C1q and tumor necrosis factor related protein 5	0.032
Gata3	GATA binding protein 3	0.031
Atoh7	atonal homolog 7 (Drosophila)	0.027
Ier3	immediate early response 3	0.027
Hbegf	heparin-binding EGF-like growth factor	0.025
Fos	FBJ osteosarcoma oncogene	0.025
Lef1	lymphoid enhancer binding factor 1	0.024
Sertad1	SERTA domain containing 1	0.024
Tbx10	T-box 10	0.023
Dlx5	distal-less homeobox 5	0.022
Gadd45b	growth arrest and DNA-damage-inducible 45 beta	0.022
Mtap1b	microtubule-associated protein 1B	0.022
Rab20	RAB20, member RAS oncogene family	0.022
Fgfr1	fibroblast growth factor receptor 1	0.020
Disp1	dispatched homolog 1 (Drosophila)	0.020
Map2k3	mitogen-activated protein kinase kinase 3	0.019
Klf4	Kruppel-like factor 4 (gut)	0.019
Nog	noggin	0.018
Ptgs2	prostaglandin-endoperoxide synthase 2	0.018
Zic2	zinc finger protein of the cerebellum 2	0.018
Zeb1	zinc finger E-box binding homeobox 1	0.017
Hesx1	homeobox gene expressed in ES cells	0.017
Cyp26a1	cytochrome P450, family 26, subfamily a, polypeptide 1	0.017
Csrnp1	cysteine-serine-rich nuclear protein 1	0.016
Barhl2	BarH-like 2 (Drosophila)	0.016
Bhlhe40	basic helix-loop-helix family, member e40	0.016
Osr1	odd-skipped related 1 (Drosophila)	0.016
Pde6c	phosphodiesterase 6C, cGMP specific, cone, alpha prime	0.015
Nodal	nodal	0.015
Mxd1	MAX dimerization protein 1	0.014
Stat3	signal transducer and activator of transcription 3	0.014
Irs2	insulin receptor substrate 2	0.014
Ptch1	patched homolog 1	0.014
Plk3	polo-like kinase 3 (Drosophila)	0.014
Epha2	Eph receptor A2	0.014
Rlbp1	retinaldehyde binding protein 1	0.013
Mitf	microphthalmia-associated transcription factor	0.013
Nrip3	nuclear receptor interacting protein 3	0.013
Htt	huntingtin	0.013
Crb1	crumbs homolog 1 (Drosophila)	0.013
Rxra	retinoid X receptor alpha	0.013
Tinagl1	tubulointerstitial nephritis antigen-like 1	0.013
Socs3	suppressor of cytokine signaling 3	0.013
Ntrk2	neurotrophic tyrosine kinase, receptor, type 2	0.013
Sox9	SRY-box containing gene 9	0.012
Fign	fidgetin	0.012
Btg2	B-cell translocation gene 2, anti-proliferative	0.012
Pcsk6	proprotein convertase subtilisin/kexin type 6	0.012
Plaur	plasminogen activator, urokinase receptor	0.012
Wt1	Wilms tumor 1 homolog	0.012
Kremen2	kringle containing transmembrane protein 2	0.012
Maff	v-maf musculoaponeurotic fibrosarcoma oncogene family, protein F (avian)	0.011	Mouse
Bhlhe22	basic helix-loop-helix family, member e22	0.011
Nfkbia	nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha	0.011
Soat2	sterol O-acyltransferase 2	0.011
Aipl1	aryl hydrocarbon receptor-interacting protein-like 1	0.011
Pax8	paired box gene 8	0.011
Phox2b	paired-like homeobox 2b	0.011
Egr2	early growth response 2	0.011
Lgr4	leucine-rich repeat-containing G protein-coupled receptor 4	0.011
Per1	period homolog 1 (Drosophila)	0.011
Tnfaip3	tumor necrosis factor, alpha-induced protein 3	0.011
Foxi1	forkhead box I1	0.011
Stk40	serine/threonine kinase 40	0.010
Cyr61	cysteine rich protein 61	0.010
Pdc	phosducin	0.010
Bmp2	bone morphogenetic protein 2	0.010
Ptf1a	pancreas specific transcription factor, 1a	0.010
Lingo3	leucine rich repeat and Ig domain containing 3	0.010