IMP

Click on a gene's description to view its network relationships with genes known to be involved in "interneuron migration from the subpallium to the cortex"

Show only novel predictions Show only unknown genes Highlight genes with functional analogs involved in "interneuron migration from the subpallium to the cortex" (in gray)

Name	Description	Probability	Func Analog Organism
Otx2	orthodenticle homolog 2 (Drosophila)	1.000
Pax6	paired box gene 6	0.998
Shh	sonic hedgehog	0.988
Gli3	GLI-Kruppel family member GLI3	0.972
Emx1	empty spiracles homolog 1 (Drosophila)	0.968
Emx2	empty spiracles homolog 2 (Drosophila)	0.890
Pax2	paired box gene 2	0.885
Gbx2	gastrulation brain homeobox 2	0.858
Pitx2	paired-like homeodomain transcription factor 2	0.829
Msx1	homeobox, msh-like 1	0.822
Hand1	heart and neural crest derivatives expressed transcript 1	0.791
Tcfap2a	transcription factor AP-2, alpha	0.782
Fgf8	fibroblast growth factor 8	0.730
Lhx9	LIM homeobox protein 9	0.729	Mouse
Dlx5	distal-less homeobox 5	0.717
Lhx3	LIM homeobox protein 3	0.711	Mouse
Six1	sine oculis-related homeobox 1 homolog (Drosophila)	0.699
Drd2	dopamine receptor D2	0.629
Tbx1	T-box 1	0.611
Hes5	hairy and enhancer of split 5 (Drosophila)	0.587
Lmx1b	LIM homeobox transcription factor 1 beta	0.575	Mouse
Foxg1	forkhead box G1	0.536
Pax3	paired box gene 3	0.531
En1	engrailed 1	0.462
Prrx1	paired related homeobox 1	0.430
Lhx1	LIM homeobox protein 1	0.423	Mouse
Eya1	eyes absent 1 homolog (Drosophila)	0.401
Neurod1	neurogenic differentiation 1	0.372
Sox2	SRY-box containing gene 2	0.353
Alx4	aristaless-like homeobox 4	0.338	Mouse
Ntrk2	neurotrophic tyrosine kinase, receptor, type 2	0.322
Nodal	nodal	0.320
Neurog2	neurogenin 2	0.286
Dlx6	distal-less homeobox 6	0.280
Grm2	glutamate receptor, metabotropic 2	0.279
ND6	NADH dehydrogenase subunit 6	0.270
Ascl1	achaete-scute complex homolog 1 (Drosophila)	0.267
Cckbr	cholecystokinin B receptor	0.263
Six3	sine oculis-related homeobox 3 homolog (Drosophila)	0.255
Foxc1	forkhead box C1	0.245
Sox9	SRY-box containing gene 9	0.228
Otx1	orthodenticle homolog 1 (Drosophila)	0.227
Mab21l2	mab-21-like 2 (C. elegans)	0.201
Nr2e1	nuclear receptor subfamily 2, group E, member 1	0.191
Isl1	ISL1 transcription factor, LIM/homeodomain	0.190	Mouse
Runx2	runt related transcription factor 2	0.179
Lhx6	LIM homeobox protein 6	0.177
Foxc2	forkhead box C2	0.173
Hand2	heart and neural crest derivatives expressed transcript 2	0.168
Hoxb1	homeobox B1	0.151
Oprd1	opioid receptor, delta 1	0.149
Msx2	homeobox, msh-like 2	0.147
Zic3	zinc finger protein of the cerebellum 3	0.146
Insm1	insulinoma-associated 1	0.145
Oprm1	opioid receptor, mu 1	0.133
Gsx1	GS homeobox 1	0.132
Pnpla2	patatin-like phospholipase domain containing 2	0.132
Sox3	SRY-box containing gene 3	0.127
Dcc	deleted in colorectal carcinoma	0.127
Atoh7	atonal homolog 7 (Drosophila)	0.124
Nr5a1	nuclear receptor subfamily 5, group A, member 1	0.122
Sox11	SRY-box containing gene 11	0.115
Dlx2	distal-less homeobox 2	0.103
Adrb1	adrenergic receptor, beta 1	0.102	Mouse
Rspo2	R-spondin 2 homolog (Xenopus laevis)	0.101
Nxph1	neurexophilin 1	0.101
Gad2	glutamic acid decarboxylase 2	0.099
Slc6a3	solute carrier family 6 (neurotransmitter transporter, dopamine), member 3	0.099
Fgf3	fibroblast growth factor 3	0.096
Pou4f2	POU domain, class 4, transcription factor 2	0.095
Dkk1	dickkopf homolog 1 (Xenopus laevis)	0.094
Tbx15	T-box 15	0.093
Nog	noggin	0.090
Nkx1-2	NK1 transcription factor related, locus 2 (Drosophila)	0.090
Nkx2-2	NK2 transcription factor related, locus 2 (Drosophila)	0.087
Adcyap1	adenylate cyclase activating polypeptide 1	0.083
Alx3	aristaless-like homeobox 3	0.079	Mouse
Pitx1	paired-like homeodomain transcription factor 1	0.076
Fgf10	fibroblast growth factor 10	0.073
Bmp4	bone morphogenetic protein 4	0.073
Ncan	neurocan	0.071
Col4a3	collagen, type IV, alpha 3	0.068
Drd4	dopamine receptor D4	0.067	Mouse
Kcnq2	potassium voltage-gated channel, subfamily Q, member 2	0.067
Hmx1	H6 homeobox 1	0.066
Gabrb1	gamma-aminobutyric acid (GABA) A receptor, subunit beta 1	0.065
Hoxa1	homeobox A1	0.062
Dlx1	distal-less homeobox 1	0.061
Fezf2	Fez family zinc finger 2	0.061
Cer1	cerberus 1 homolog (Xenopus laevis)	0.060
Chrm1	cholinergic receptor, muscarinic 1, CNS	0.055
En2	engrailed 2	0.054
Glra1	glycine receptor, alpha 1 subunit	0.054
Sall3	sal-like 3 (Drosophila)	0.053
Dcx	doublecortin	0.052
Pdgfra	platelet derived growth factor receptor, alpha polypeptide	0.052
Cdh10	cadherin 10	0.051
Neto1	neuropilin (NRP) and tolloid (TLL)-like 1	0.050
Wt1	Wilms tumor 1 homolog	0.049
Cdh8	cadherin 8	0.048
Onecut1	one cut domain, family member 1	0.046
Kl	klotho	0.046
Alx1	ALX homeobox 1	0.046	Mouse
Cdk5r1	cyclin-dependent kinase 5, regulatory subunit 1 (p35)	0.042
Trpc5	transient receptor potential cation channel, subfamily C, member 5	0.042
Col25a1	collagen, type XXV, alpha 1	0.041
Zic1	zinc finger protein of the cerebellum 1	0.041
Sstr4	somatostatin receptor 4	0.040
Oprk1	opioid receptor, kappa 1	0.040
Htr5a	5-hydroxytryptamine (serotonin) receptor 5A	0.039	Mouse
Rrh	retinal pigment epithelium derived rhodopsin homolog	0.038
Crhr1	corticotropin releasing hormone receptor 1	0.037
Fam184b	family with sequence similarity 184, member B	0.037
Zic2	zinc finger protein of the cerebellum 2	0.037
Sox1	SRY-box containing gene 1	0.035
Olfr71	olfactory receptor 71	0.035
Npy2r	neuropeptide Y receptor Y2	0.035
Neurog3	neurogenin 3	0.035
Theg	testicular haploid expressed gene	0.034
Oprl1	opioid receptor-like 1	0.034
Btn1a1	butyrophilin, subfamily 1, member A1	0.034
Grm8	glutamate receptor, metabotropic 8	0.033
Fgfr2	fibroblast growth factor receptor 2	0.033
Kcns2	K+ voltage-gated channel, subfamily S, 2	0.033
Magel2	melanoma antigen, family L, 2	0.032
Pax7	paired box gene 7	0.032
Tlx3	T-cell leukemia, homeobox 3	0.032
Atp2b2	ATPase, Ca++ transporting, plasma membrane 2	0.032
Hmx3	H6 homeobox 3	0.031
Sstr1	somatostatin receptor 1	0.031
Gsc	goosecoid homeobox	0.029
Hoxd13	homeobox D13	0.028
Phox2b	paired-like homeobox 2b	0.028
Acr	acrosin prepropeptide	0.027
Foxd2	forkhead box D2	0.027
Kcne2	potassium voltage-gated channel, Isk-related subfamily, gene 2	0.027
Caln1	calneuron 1	0.027
Evx1	even skipped homeotic gene 1 homolog	0.026
Gpr50	G-protein-coupled receptor 50	0.026
Krt12	keratin 12	0.026
Wnt3a	wingless-related MMTV integration site 3A	0.026
Fgf5	fibroblast growth factor 5	0.026
Chrna7	cholinergic receptor, nicotinic, alpha polypeptide 7	0.026
Hoxa10	homeobox A10	0.026
Vstm2b	V-set and transmembrane domain containing 2B	0.025
Grm1	glutamate receptor, metabotropic 1	0.025
Sema5b	sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5B	0.025
Hoxc8	homeobox C8	0.025
Wnt7a	wingless-related MMTV integration site 7A	0.025
Ptprz1	protein tyrosine phosphatase, receptor type Z, polypeptide 1	0.024
Myod1	myogenic differentiation 1	0.024
Calb1	calbindin 1	0.024
Cfc1	cripto, FRL-1, cryptic family 1	0.024
Lhx5	LIM homeobox protein 5	0.024	Mouse
Kcnj3	potassium inwardly-rectifying channel, subfamily J, member 3	0.023
Cntn2	contactin 2	0.023
Wnt9b	wingless-type MMTV integration site 9B	0.023
Prm3	protamine 3	0.023
Neurod4	neurogenic differentiation 4	0.023
Six4	sine oculis-related homeobox 4 homolog (Drosophila)	0.023
Prrx2	paired related homeobox 2	0.023
Rprm	reprimo, TP53 dependent G2 arrest mediator candidate	0.022
Wnt1	wingless-related MMTV integration site 1	0.022
Col22a1	collagen, type XXII, alpha 1	0.022
Gria1	glutamate receptor, ionotropic, AMPA1 (alpha 1)	0.022
Crx	cone-rod homeobox containing gene	0.022
Cux2	cut-like homeobox 2	0.022
Hcrt	hypocretin	0.022
Six6	sine oculis-related homeobox 6 homolog (Drosophila)	0.021
Hoxa2	homeobox A2	0.021
Pax9	paired box gene 9	0.021
Hoxd3	homeobox D3	0.021
Gabra2	gamma-aminobutyric acid (GABA) A receptor, subunit alpha 2	0.021
Hpca	hippocalcin	0.020
Eya4	eyes absent 4 homolog (Drosophila)	0.020
Sspo	SCO-spondin	0.020
Cnr1	cannabinoid receptor 1 (brain)	0.020
Gata4	GATA binding protein 4	0.020
Matn3	matrilin 3	0.020
Bhlhe22	basic helix-loop-helix family, member e22	0.020
Pou3f3	POU domain, class 3, transcription factor 3	0.019
Htr1f	5-hydroxytryptamine (serotonin) receptor 1F	0.019	Mouse
Hoxa11	homeobox A11	0.019
Mc3r	melanocortin 3 receptor	0.019
Mmp16	matrix metallopeptidase 16	0.019
Gucy2e	guanylate cyclase 2e	0.018
Pou3f4	POU domain, class 3, transcription factor 4	0.018
Olfr1264	olfactory receptor 1264	0.018
Ldb2	LIM domain binding 2	0.018
Slc32a1	solute carrier family 32 (GABA vesicular transporter), member 1	0.018
Sez6	seizure related gene 6	0.018
Slc16a8	solute carrier family 16 (monocarboxylic acid transporters), member 8	0.018
Kcnj6	potassium inwardly-rectifying channel, subfamily J, member 6	0.017
Ncam2	neural cell adhesion molecule 2	0.017
B3gat1	beta-1,3-glucuronyltransferase 1 (glucuronosyltransferase P)	0.017
Htr7	5-hydroxytryptamine (serotonin) receptor 7	0.017
Trpm1	transient receptor potential cation channel, subfamily M, member 1	0.017
Lef1	lymphoid enhancer binding factor 1	0.017
Nhlh1	nescient helix loop helix 1	0.017
Neurog1	neurogenin 1	0.017
Pde6a	phosphodiesterase 6A, cGMP-specific, rod, alpha	0.016
Epha6	Eph receptor A6	0.016
Pax8	paired box gene 8	0.016
Gria4	glutamate receptor, ionotropic, AMPA4 (alpha 4)	0.016
Neurod2	neurogenic differentiation 2	0.016
Lhb	luteinizing hormone beta	0.016
Lbx1	ladybird homeobox homolog 1 (Drosophila)	0.016
Hoxd1	homeobox D1	0.016
Mip	major intrinsic protein of eye lens fiber	0.016
Epha8	Eph receptor A8	0.016
Gjd2	gap junction protein, delta 2	0.016
Kcnj11	potassium inwardly rectifying channel, subfamily J, member 11	0.016
Dab1	disabled homolog 1 (Drosophila)	0.016
Hoxa4	homeobox A4	0.016
3110047P20Rik	RIKEN cDNA 3110047P20 gene	0.016
Prox1	prospero-related homeobox 1	0.016
Slc12a1	solute carrier family 12, member 1	0.015
Vsx2	visual system homeobox 2	0.015	Mouse
Gabra1	gamma-aminobutyric acid (GABA) A receptor, subunit alpha 1	0.015
Myt1	myelin transcription factor 1	0.015
Fgf4	fibroblast growth factor 4	0.015
Oca2	oculocutaneous albinism II	0.015
Bdnf	brain derived neurotrophic factor	0.015
Cga	glycoprotein hormones, alpha subunit	0.015
Kif5a	kinesin family member 5A	0.015
Cabp5	calcium binding protein 5	0.014
Grid1	glutamate receptor, ionotropic, delta 1	0.014
Gdnf	glial cell line derived neurotrophic factor	0.014
Nrip3	nuclear receptor interacting protein 3	0.014
Shc3	src homology 2 domain-containing transforming protein C3	0.014
Adra2b	adrenergic receptor, alpha 2b	0.014	Mouse
Syt6	synaptotagmin VI	0.014
Uncx	UNC homeobox	0.014
Ptf1a	pancreas specific transcription factor, 1a	0.014
Bmp2	bone morphogenetic protein 2	0.014
Prph2	peripherin 2	0.013
Otog	otogelin	0.013
Tcfap2c	transcription factor AP-2, gamma	0.013
Tyr	tyrosinase	0.013
Cacng5	calcium channel, voltage-dependent, gamma subunit 5	0.013
Zfhx4	zinc finger homeodomain 4	0.013
Tbr1	T-box brain gene 1	0.013
Rarb	retinoic acid receptor, beta	0.013
Nkx2-3	NK2 transcription factor related, locus 3 (Drosophila)	0.013
Scrt2	scratch homolog 2, zinc finger protein (Drosophila)	0.013
Nrg3	neuregulin 3	0.013
Cdh6	cadherin 6	0.013
Syt2	synaptotagmin II	0.013
Pparg	peroxisome proliferator activated receptor gamma	0.012
Odz2	odd Oz/ten-m homolog 2 (Drosophila)	0.012
Efna2	ephrin A2	0.012
T	brachyury	0.012
Bmp7	bone morphogenetic protein 7	0.012
Chd7	chromodomain helicase DNA binding protein 7	0.012
Cldn11	claudin 11	0.012
Bcl2l10	Bcl2-like 10	0.012
Hapln1	hyaluronan and proteoglycan link protein 1	0.012
Zfpm2	zinc finger protein, multitype 2	0.012
Smo	smoothened homolog (Drosophila)	0.012
Pou3f2	POU domain, class 3, transcription factor 2	0.012
Emid2	EMI domain containing 2	0.012
Grik1	glutamate receptor, ionotropic, kainate 1	0.012
Pdx1	pancreatic and duodenal homeobox 1	0.012
Tacr3	tachykinin receptor 3	0.012
Slc6a1	solute carrier family 6 (neurotransmitter transporter, GABA), member 1	0.011
Sox21	SRY-box containing gene 21	0.011
Casp14	caspase 14	0.011
Sstr2	somatostatin receptor 2	0.011
Cbln1	cerebellin 1 precursor protein	0.011
Foxd4	forkhead box D4	0.011
Tecta	tectorin alpha	0.011
Bnc1	basonuclin 1	0.011
Sim1	single-minded homolog 1 (Drosophila)	0.011
Cntn3	contactin 3	0.011	Mouse
Gfra1	glial cell line derived neurotrophic factor family receptor alpha 1	0.011
Gabrg3	gamma-aminobutyric acid (GABA) A receptor, subunit gamma 3	0.011
Tulp1	tubby like protein 1	0.011
Krt84	keratin 84	0.011
Kcna4	potassium voltage-gated channel, shaker-related subfamily, member 4	0.011
Otp	orthopedia homolog (Drosophila)	0.011
Synpr	synaptoporin	0.011
Npy5r	neuropeptide Y receptor Y5	0.011
Gria2	glutamate receptor, ionotropic, AMPA2 (alpha 2)	0.011
Lhx8	LIM homeobox protein 8	0.011	Mouse
Elavl2	ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu antigen B)	0.011
Arx	aristaless related homeobox	0.011
Col11a1	collagen, type XI, alpha 1	0.011
Col19a1	collagen, type XIX, alpha 1	0.011
Cntn4	contactin 4	0.011	Mouse
Gpr27	G protein-coupled receptor 27	0.011
Igdcc3	immunoglobulin superfamily, DCC subclass, member 3	0.011
Hoxb7	homeobox B7	0.010
Clcnka	chloride channel Ka	0.010
Csmd1	CUB and Sushi multiple domains 1	0.010
B3galt1	UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 1	0.010
Mycn	v-myc myelocytomatosis viral related oncogene, neuroblastoma derived (avian)	0.010
Hoxd10	homeobox D10	0.010