IMP

Process View

Rattus norvegicus

2 genes annotated in rat

specification of organ identity

The regionalization process in which the identity of an organ primordium is specified. Identity is considered to be the aggregate of characteristics by which a structure is recognized.

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Known genes in the process in rat Include functional analogs

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Gene Predictions

Click on a gene's description to view its network relationships with genes known to be involved in "specification of organ identity"

Show only novel predictions Show only unknown genes Highlight genes with functional analogs involved in "specification of organ identity" (in gray)

Name	Description	Probability	Func Analog Organism
Unc5b	unc-5 homolog B (C. elegans)	0.180
Cxxc4	CXXC finger 4	0.129
Shox2	short stature homeobox 2	0.076
Arnt	aryl hydrocarbon receptor nuclear translocator	0.056
Fmod	fibromodulin	0.049
Erbb4	v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)	0.048
Mrgprf	MAS-related GPR, member F	0.043
Glg1	golgi apparatus protein 1	0.043
Smad7	SMAD family member 7	0.041
LOC246267	resection-induced TPI (rs11)	0.038
Cdkn2b	cyclin-dependent kinase inhibitor 2B (p15, inhibits CDK4)	0.035
Prrx1	paired related homeobox 1	0.033
F13a1	coagulation factor XIII, A1 polypeptide	0.032
Rcvrn	recoverin	0.031
Sardh	sarcosine dehydrogenase	0.031
Pdyn	prodynorphin	0.031
Syt9	synaptotagmin IX	0.029
Met	met proto-oncogene	0.029
Slc5a1	solute carrier family 5 (sodium/glucose cotransporter), member 1	0.028
Oprm1	opioid receptor, mu 1	0.028
Chrnb4	cholinergic receptor, nicotinic, beta 4	0.027
Olfml2b	olfactomedin-like 2B	0.026
Irs1	insulin receptor substrate 1	0.026
RY2G5	potential ligand-binding protein	0.026
Clcn4-2	chloride channel 4-2	0.026
Cebpe	CCAAT/enhancer binding protein (C/EBP), epsilon	0.025
Slc14a1	solute carrier family 14 (urea transporter), member 1	0.025
Sv2c	synaptic vesicle glycoprotein 2c	0.025
Gna12	guanine nucleotide binding protein (G protein) alpha 12	0.025
Axin1	axin 1	0.024
Nek9	NIMA (never in mitosis gene a)- related kinase 9	0.024
RGD1309821	similar to KIAA1161 protein	0.024
Clcnkb	chloride channel Kb	0.024
Bmp3	bone morphogenetic protein 3	0.023
Sdc3	syndecan 3	0.023
Nkd1	naked cuticle homolog 1 (Drosophila)	0.023
Kcnj5	potassium inwardly-rectifying channel, subfamily J, member 5	0.023
Hoxc4	homeo box C4	0.023
Cpxm2	carboxypeptidase X (M14 family), member 2	0.023
Slc13a1	solute carrier family 13 (sodium/sulfate symporters), member 1	0.023
Grm8	glutamate receptor, metabotropic 8	0.022
Sod3	superoxide dismutase 3, extracellular	0.022
Adrb1	adrenergic, beta-1-, receptor	0.022
Fcer2	Fc fragment of IgE, low affinity II, receptor for (CD23)	0.021
Fzd2	frizzled homolog 2 (Drosophila)	0.021
Strn	striatin, calmodulin binding protein	0.021
Amph	amphiphysin	0.021
Foxc2	forkhead box C2	0.021
Snrk	SNF related kinase	0.021
Otx1	orthodenticle homeobox 1	0.021
Ngfr	nerve growth factor receptor (TNFR superfamily, member 16)	0.021
Scn5a	sodium channel, voltage-gated, type V, alpha subunit	0.021
Gabra4	gamma-aminobutyric acid (GABA) A receptor, alpha 4	0.021
Six3	SIX homeobox 3	0.021
Gtf2a1	general transcription factor IIA, 1	0.021
Notch2	Notch homolog 2 (Drosophila)	0.020
Lepr	leptin receptor	0.020
Kcnip1	Kv channel-interacting protein 1	0.020
Mep1b	meprin 1 beta	0.020
Kcnh5	potassium voltage-gated channel, subfamily H (eag-related), member 5	0.020
Myo1c	myosin IC	0.020
Tgfb2	transforming growth factor, beta 2	0.020
Cercam	cerebral endothelial cell adhesion molecule	0.020
Folh1	folate hydrolase 1	0.020
Ctrb1	chymotrypsinogen B1	0.020
Ky	kyphoscoliosis peptidase	0.020
Lims1	LIM and senescent cell antigen-like domains 1	0.019
Znf503	zinc finger protein 503	0.019
P2rx6	purinergic receptor P2X, ligand-gated ion channel, 6	0.019
Ptgfr	prostaglandin F receptor	0.019
Gfra1	GDNF family receptor alpha 1	0.019
Acvr1	activin A receptor, type I	0.019
Adamts13	ADAM metallopeptidase with thrombospondin type 1 motif, 13	0.019
Akt2	v-akt murine thymoma viral oncogene homolog 2	0.019
Kcnc2	potassium voltage gated channel, Shaw-related subfamily, member 2	0.019
Pde7b	phosphodiesterase 7B	0.019
Robo1	roundabout homolog 1 (Drosophila)	0.019
Pou2f3	POU class 2 homeobox 3	0.019
Tgfbr2	transforming growth factor, beta receptor II	0.018
Pclo	piccolo (presynaptic cytomatrix protein)	0.018
Nefm	neurofilament, medium polypeptide	0.018
Nr2f2	nuclear receptor subfamily 2, group F, member 2	0.018
Prap1	proline-rich acidic protein 1	0.018
Ucn2	urocortin 2	0.018
Phkg1	phosphorylase kinase, gamma 1	0.017
Mycs	myc-like oncogene, s-myc protein	0.017
Myh9	myosin, heavy chain 9, non-muscle	0.017
Cst12	cystatin 12	0.017
A2bp1	ataxin 2 binding protein 1	0.017
Itpr2	inositol 1,4,5-triphosphate receptor, type 2	0.017
LOC687536	similar to Forkhead box protein F1 (Forkhead-related protein FKHL5) (Forkhead-related transcription factor 1) (FREAC-1) (Hepatocyte nuclear factor 3 forkhead homolog 8) (HFH-8)	0.017
Ccdc102a	coiled-coil domain containing 102A	0.017
Ednra	endothelin receptor type A	0.017
Kcnh7	potassium voltage-gated channel, subfamily H (eag-related), member 7	0.017
Cacna1s	calcium channel, voltage-dependent, L type, alpha 1S subunit	0.017
Nxph3	neurexophilin 3	0.017
Ugt2a1	UDP glucuronosyltransferase 2 family, polypeptide A1	0.016
Tbr1	T-box, brain, 1	0.016
Sult1c2	sulfotransferase family, cytosolic, 1C, member 2	0.016
Ryr2	ryanodine receptor 2, cardiac	0.016
Fam69b	family with sequence similarity 69, member B	0.016
Mgll	monoglyceride lipase	0.016
Itpkb	inositol 1,4,5-trisphosphate 3-kinase B	0.016
Cdh6	cadherin 6	0.016
Cldn1	claudin 1	0.016
Erbb3	v-erb-b2 erythroblastic leukemia viral oncogene homolog 3 (avian)	0.015
Cela2a	chymotrypsin-like elastase family, member 2A	0.015
Creb1	cAMP responsive element binding protein 1	0.015
Smad6	SMAD family member 6	0.015
Galr2	galanin receptor 2	0.015
Srebf1	sterol regulatory element binding transcription factor 1	0.015
Bmp6	bone morphogenetic protein 6	0.015
Sbf1	SET binding factor 1	0.015
Fgf5	fibroblast growth factor 5	0.015	Rat
Dact3	dapper, antagonist of beta-catenin, homolog 3 (Xenopus laevis)	0.015
Ephb1	Eph receptor B1	0.015
Mpp2	membrane protein, palmitoylated 2 (MAGUK p55 subfamily member 2)	0.015
Stat6	signal transducer and activator of transcription 6	0.015
Kcnj1	potassium inwardly-rectifying channel, subfamily J, member 1	0.015
Gpc1	glypican 1	0.015
Tpc1808	tropic 1808	0.015
Fgf8	fibroblast growth factor 8	0.015
Pik3r3	phosphoinositide-3-kinase, regulatory subunit 3 (gamma)	0.015
Fstl3	follistatin-like 3 (secreted glycoprotein)	0.014
Gper	G protein-coupled estrogen receptor 1	0.014
Plcd4	phospholipase C, delta 4	0.014
Il11	interleukin 11	0.014
Gabrg1	gamma-aminobutyric acid (GABA) A receptor, gamma 1	0.014
Dbh	dopamine beta-hydroxylase (dopamine beta-monooxygenase)	0.014
Cxcl6	chemokine (C-X-C motif) ligand 6 (granulocyte chemotactic protein 2)	0.014
Cpm	carboxypeptidase M	0.014
Slc18a2	solute carrier family 18 (vesicular monoamine), member 2	0.014
S1pr2	sphingosine-1-phosphate receptor 2	0.014
Neurl1B	neuralized homolog 1B (Drosophila)	0.014
Ccr2	chemokine (C-C motif) receptor 2	0.014
Stmn4	stathmin-like 4	0.014
Bcas3	breast carcinoma amplified sequence 3	0.014
Palm	paralemmin	0.014
Nr5a2	nuclear receptor subfamily 5, group A, member 2	0.014
Npr3	natriuretic peptide receptor C/guanylate cyclase C (atrionatriuretic peptide receptor C)	0.014
Lrp2	low density lipoprotein-related protein 2	0.014
Rab3il1	RAB3A interacting protein (rabin3)-like 1	0.014
Aqp7	aquaporin 7	0.013
Rxra	retinoid X receptor alpha	0.013
Srd5a2	steroid-5-alpha-reductase, alpha polypeptide 2 (3-oxo-5 alpha-steroid delta 4-dehydrogenase alpha 2)	0.013
Vegp1	von Ebners gland protein 1	0.013
Kcne1	potassium voltage-gated channel, Isk-related family, member 1	0.013
Pitx1	paired-like homeodomain 1	0.013
Pfkm	phosphofructokinase, muscle	0.013
Tas2r123	taste receptor, type 2, member 123	0.013
Rad54l2	Rad54 like 2 (S. cerevisiae)	0.013
Pga5	pepsinogen 5, group I	0.013
Ubtf	upstream binding transcription factor, RNA polymerase I	0.013
Kcnj16	potassium inwardly-rectifying channel, subfamily J, member 16	0.013
Tbx19	T-box 19	0.013
Nab1	Ngfi-A binding protein 1	0.013
Clock	clock homolog (mouse)	0.013
Gata6	GATA binding protein 6	0.013
Mcam	melanoma cell adhesion molecule	0.013
Il1r1	interleukin 1 receptor, type I	0.013
Vash2	vasohibin 2	0.013
Timp3	TIMP metallopeptidase inhibitor 3	0.013
Masp1	mannan-binding lectin serine peptidase 1	0.013
Opn4	opsin 4	0.013
Hist1h1d	histone cluster 1, H1d	0.013
Msx1	msh homeobox 1	0.013
Defb4	defensin beta 4	0.013
Il13ra2	interleukin 13 receptor, alpha 2	0.013
Hcn3	hyperpolarization-activated cyclic nucleotide-gated potassium channel 3	0.013
Pqcp	polyglutamine-containing protein	0.013
Tas2r119	taste receptor, type 2, member 119	0.013
Foxs1	forkhead box S1	0.013
Chrna3	cholinergic receptor, nicotinic, alpha 3	0.013
Krtap14l	keratin associated protein 14 like	0.013
Slc6a18	solute carrier family 6, member 18	0.013
Egr3	early growth response 3	0.013
Mmp23	matrix metallopeptidase 23	0.013
Engase	endo-beta-N-acetylglucosaminidase	0.013
Galr1	galanin receptor 1	0.013
Esr2	estrogen receptor 2 (ER beta)	0.013
Fgfrl1	fibroblast growth factor receptor-like 1	0.013
Slc8a1	solute carrier family 8 (sodium/calcium exchanger), member 1	0.013
Kcnq3	potassium voltage-gated channel, KQT-like subfamily, member 3	0.012
S100a7a	S100 calcium binding protein A7A	0.012
Ecel1	endothelin converting enzyme-like 1	0.012
Cdh13	cadherin 13	0.012
Slc34a2	solute carrier family 34 (sodium phosphate), member 2	0.012
Grm7	glutamate receptor, metabotropic 7	0.012
Col4a4	collagen, type IV, alpha 4	0.012
Tff3	trefoil factor 3, intestinal	0.012
Scnn1b	sodium channel, nonvoltage-gated 1, beta	0.012
Umod	uromodulin	0.012
Lifr	leukemia inhibitory factor receptor alpha	0.012
Ifng	interferon gamma	0.012
Scgb1a1	secretoglobin, family 1A, member 1 (uteroglobin)	0.012
Pde3a	phosphodiesterase 3A, cGMP inhibited	0.012
Schip1	schwannomin interacting protein 1	0.012
Tgfb3	transforming growth factor, beta 3	0.012
Prok1	prokineticin 1	0.012
RGD1308124	similar to KIAA1357 protein	0.012
Tex101	testis expressed 101	0.012
Adam23	ADAM metallopeptidase domain 23	0.012
Hoxb7	homeo box B7	0.012
Dag1	dystroglycan 1 (dystrophin-associated glycoprotein 1)	0.012
Prkca	protein kinase C, alpha	0.012
Ng23	Ng23 protein	0.012
Btc	betacellulin	0.012
Htr1b	5-hydroxytryptamine (serotonin) receptor 1B	0.011
Asip	agouti signaling protein	0.011
Gprc5c	G protein-coupled receptor, family C, group 5, member C	0.011
Brd3	bromodomain containing 3	0.011
Oxt	oxytocin, prepropeptide	0.011
Sirpa	signal-regulatory protein alpha	0.011
Il3	interleukin 3	0.011
Fap	fibroblast activation protein, alpha	0.011
Kcnt1	potassium channel, subfamily T, member 1	0.011
Flt1	FMS-related tyrosine kinase 1	0.011
Zfp238	zinc finger protein 238	0.011
Vsnl1	visinin-like 1	0.011
Dab2ip	DAB2 interacting protein	0.011
Cmklr1	chemokine-like receptor 1	0.011
Hoxc9	homeobox C9	0.011
Magi2	membrane associated guanylate kinase, WW and PDZ domain containing 2	0.011
Tert	telomerase reverse transcriptase	0.011
Myo10	myosin X	0.011
Ms4a2	membrane-spanning 4-domains, subfamily A, member 2 (Fc fragment of IgE, high affinity I, receptor for; beta polypeptide)	0.011
Il17d	interleukin 17D	0.011
Mc3r	melanocortin 3 receptor	0.011
Epha7	Eph receptor A7	0.011
Arnt2	aryl hydrocarbon receptor nuclear translocator 2	0.011
Cyp1a1	cytochrome P450, family 1, subfamily a, polypeptide 1	0.011
Folr1	folate receptor 1 (adult)	0.011
Mos	Moloney sarcoma oncogene	0.011
Atp12a	ATPase, H+/K+ transporting, nongastric, alpha polypeptide	0.011
Lrat	lecithin-retinol acyltransferase (phosphatidylcholine-retinol-O-acyltransferase)	0.011
Camk1g	calcium/calmodulin-dependent protein kinase IG	0.011
Hnf4a	hepatocyte nuclear factor 4, alpha	0.011
Pdc	phosducin	0.011
Stk11	serine/threonine kinase 11	0.011
Lcn5	lipocalin 5	0.011
Tekt4	tektin 4	0.011
Cx3cr1	chemokine (C-X3-C motif) receptor 1	0.011
Kcnj9	potassium inwardly-rectifying channel, subfamily J, member 9	0.011
Pcdh7	protocadherin 7	0.011
Foxc1	forkhead box C1	0.011
Lpp	LIM domain containing preferred translocation partner in lipoma	0.011
Gja3	gap junction protein, alpha 3	0.011
Ube3a	ubiquitin protein ligase E3A	0.010
Irx4	iroquois homeobox 4	0.010
Slc8a3	solute carrier family 8 (sodium/calcium exchanger), member 3	0.010
Nrg1	neuregulin 1	0.010
Synpo	synaptopodin	0.010
Gas6	growth arrest specific 6	0.010
Cdon	Cdon homolog (mouse)	0.010
Btbd17	BTB (POZ) domain containing 17	0.010
Slc4a3	solute carrier family 4 (anion exchanger), member 3	0.010
Manea	mannosidase, endo-alpha	0.010
Camk2a	calcium/calmodulin-dependent protein kinase II alpha	0.010
Kcng2	potassium voltage-gated channel, subfamily G, member 2	0.010
Egfl7	EGF-like-domain, multiple 7	0.010
Syde1	synapse defective 1, Rho GTPase, homolog 1 (C. elegans)	0.010
Sox13	SRY (sex determining region Y)-box 13	0.010
Map3k3	mitogen activated protein kinase kinase kinase 3	0.010
Tril	TLR4 interactor with leucine-rich repeats	0.010
Lef1	lymphoid enhancer binding factor 1	0.010
Gdf9	growth differentiation factor 9	0.010
Slc6a2	solute carrier family 6 (neurotransmitter transporter, noradrenalin), member 2	0.010
Slc39a8	solute carrier family 39 (zinc transporter), member 8	0.010
Akt1	v-akt murine thymoma viral oncogene homolog 1	0.010
Efna5	ephrin A5	0.010
Dpep1	dipeptidase 1 (renal)	0.010
Megf6	multiple EGF-like-domains 6	0.010
Ndst1	N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1	0.010
Zic1	Zic family member 1 (odd-paired homolog, Drosophila)	0.010
Sry	sex determining region Y	0.010
Crygd	crystallin, gamma D	0.010