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Danio rerio

2 genes annotated in zebrafish

wnt signaling pathway involved in somitogenesis

The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in cell state that contributes to somitogenesis.

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Known genes in the process in zebrafish Include functional analogs

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Gene Predictions

Click on a gene's description to view its network relationships with genes known to be involved in "wnt signaling pathway involved in somitogenesis"

Show only novel predictions Show only unknown genes Highlight genes with functional analogs involved in "wnt signaling pathway involved in somitogenesis" (in gray)

Name	Description	Probability	Func Analog Organism
dld	deltaD	0.908
cdh2	cadherin 2, neuronal	0.893
wnt5b	wingless-type MMTV integration site family, member 5b	0.835
shha	sonic hedgehog a	0.648
gli2a	GLI-Kruppel family member GLI2a	0.564
pcdh18a	protocadherin 18a	0.508
nog1	noggin 1	0.473
fgf3	fibroblast growth factor 3	0.441
rerea	arginine-glutamic acid dipeptide (RE) repeats a	0.422
bon	bonnie and clyde	0.405
boc	brother of CDO	0.353
lef1	lymphocyte enhancer binding factor 1	0.344
lfng	lunatic fringe homolog	0.332
flh	floating head	0.321
dusp6	dual specificity phosphatase 6	0.301
dact1	dapper homolog 1, antagonist of beta-catenin (xenopus)	0.287
smo	smoothened homolog (Drosophila)	0.273
wnt11	wingless-type MMTV integration site family, member 11	0.267
fn1	fibronectin 1	0.263
nkd1	naked cuticle homolog 1 (Drosophila)	0.261
cdx4	caudal type homeo box transcription factor 4	0.251
wnt3a	wingless-type MMTV integration site family, member 3A	0.245
cxcr4a	chemokine (C-X-C motif) receptor 4a	0.222
bmpr1aa	bone morphogenetic protein receptor, type 1aa	0.205
dact2	dapper homolog 2, antagonist of beta-catenin (xenopus)	0.202
hhip	hedgehog interacting protein	0.187
sfrp1a	secreted frizzled-related protein 1a	0.179	Mouse
sox32	SRY-box containing gene 32	0.167
sox3	SRY-box containing gene 3	0.166
eya1	eyes absent homolog 1	0.161
wif1	wnt inhibitory factor 1	0.148
zic3	zic family member 3 heterotaxy 1 (odd-paired homolog, Drosophila)	0.144
fbn2b	fibrillin 2b	0.142
mib	mind bomb	0.137
dzip1	DAZ interacting protein 1	0.135
znf503	zinc finger protein 503	0.132
axin1	axin 1	0.132
fzd10	frizzled homolog 10	0.131
fgfr2	fibroblast growth factor receptor 2	0.126
sox2	SRY-box containing gene 2	0.120
cxcl12a	chemokine (C-X-C motif) ligand 12a (stromal cell-derived factor 1)	0.117
hnf1ba	HNF1 homeobox Ba	0.114
spry2	sprouty homolog 2	0.109
frzb	frizzled-related protein	0.109
robo1	roundabout homolog 1	0.108
foxd3	forkhead box D3	0.108
sox11a	SRY-box containing gene 11a	0.106
epha4a	eph receptor A4a	0.106
fgfr4	fibroblast growth factor receptor 4	0.103
lamb1a	laminin, beta 1a	0.092
med12	mediator of RNA polymerase II transcription, subunit 12 homolog	0.085
tfap2a	transcription factor AP-2 alpha	0.083
pbx4	pre-B-cell leukemia transcription factor 4	0.083
wls	wntless homolog (Drosophila)	0.080
tbx1	T-box 1	0.078
scube2	signal peptide, CUB domain, EGF-like 2	0.077
tpbgl	trophoblast glycoprotein-like	0.073
ntla	no tail a	0.073
ctnnb1	catenin (cadherin-associated protein), beta 1	0.070
wnt8a	wingless-type MMTV integration site family, member 8a	0.070
notch3	notch homolog 3	0.068
foxb1.2	forkhead box B1.2	0.065
col5a1	procollagen, type V, alpha 1	0.064
sox11b	SRY-box containing gene 11b	0.062
nrarpa	notch-regulated ankyrin repeat protein a	0.061
epha7	eph receptor A7	0.059
oep	one-eyed pinhead	0.057
dla	deltaA	0.056
fzd7a	frizzled homolog 7a	0.055
met	met proto-oncogene (hepatocyte growth factor receptor)	0.051
supt6h	suppressor of Ty 6 homolog	0.051
pkd2	polycystic kidney disease 2	0.050
twist1a	twist1a	0.049
ntn2	netrin 2	0.048
rest	RE1-silencing transcription factor	0.047
lamc1	laminin, gamma 1	0.046
zic2a	zic family member 2 (odd-paired homolog, Drosophila), a	0.046
tbx2b	T-box 2b	0.046
aplnra	apelin receptor a	0.045
ndr2	nodal-related 2	0.045
axin2	axin 2 (conductin, axil)	0.044	Zebrafish
gsc	goosecoid	0.043
smarca4	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4	0.043
szl	sizzled	0.043
foxa3	forkhead box A3	0.042
fzd7b	frizzled homolog 7b	0.042
aldh1a2	aldehyde dehydrogenase 1 family, member A2	0.042
dlc	deltaC	0.042
chd7	chromodomain helicase DNA binding protein 7	0.040
dag1	dystroglycan 1	0.039
hoxd4a	homeo box D4a	0.038
rasl11b	RAS-like, family 11, member B	0.037
tbx16	T-box gene 16	0.037
spns2	spinster homolog 2 (Drosophila)	0.036
hoxb1b	homeo box B1b	0.035
acvr1b	activin A receptor, type IB	0.035
hoxb3a	homeo box B3a	0.033
smad5	MAD homolog 5 (Drosophila)	0.032
tcf7l1a	transcription factor 7-like 1a (T-cell specific, HMG-box)	0.032
msxb	muscle segment homeobox B	0.032
cxcr4b	chemokine (C-X-C motif), receptor 4b	0.032
znf703	zinc finger protein 703	0.031
wnt11r	wingless-type MMTV integration site family, member 11, related	0.031
spry4	sprouty (Drosophila) homolog 4	0.030
fbp1b	fructose-1,6-bisphosphatase 1b	0.029
dhrs3a	dehydrogenase/reductase (SDR family) member 3a	0.029
tcf7l2	transcription factor 7-like 2 (T-cell specific, HMG-box)	0.029
cyp26a1	cytochrome P450, subfamily XXVIA, polypeptide 1	0.028
sulf1	sulfatase 1	0.028
ippk	inositol 1,3,4,5,6-pentakisphosphate 2-kinase	0.027
rarga	retinoic acid receptor gamma a	0.026
neo1	neogenin 1	0.026
tnnt2a	troponin T2a, cardiac	0.025
her1	hairy-related 1	0.025
smad1	MAD homolog 1 (Drosophila)	0.024
foxa2	forkhead box A2	0.023
ephb4b	eph receptor B4b	0.023
notum3	notum 3	0.023
dkk1b	dickkopf 1b	0.022	Mouse
rnd1l	Rho family GTPase 1 like	0.022
lhx2b	LIM homeobox 2b	0.022
hmx3	homeo box (H6 family) 3	0.022
si:dkeyp-7c9.1	si:dkeyp-7c9.1	0.021
prkci	protein kinase C, iota	0.020
tfap2c	transcription factor AP-2 gamma (activating enhancer binding protein 2 gamma)	0.020
fzd9b	frizzled homolog 9b	0.020
kal1b	Kallmann syndrome 1b sequence	0.020
lmo4a	LIM domain only 4a	0.020
fzd8a	frizzled homolog 8a	0.019
rbfox2	RNA binding protein, fox-1 homolog (C. elegans) 2	0.019
nr2f1a	nuclear receptor subfamily 2, group F, member 1a	0.019
gdf6a	growth differentiation factor 6a	0.018
rgma	RGM domain family, member A	0.018
klf4	Kruppel-like factor 4	0.018
mesp2	mesoderm posterior 2 homolog (mouse)	0.018
zeb1	zinc finger E-box binding homeobox 1	0.017
irx5a	iroquois homeobox protein 5a	0.017
chd	chordin	0.017
pcdh8	protocadherin 8	0.016
tcf12	transcription factor 12	0.016
mafba	v-maf musculoaponeurotic fibrosarcoma oncogene family, protein B (avian)	0.016
fgf17	fibroblast growth factor 17	0.016
hoxb8a	homeo box B8a	0.016
wnt2bb	wingless-type MMTV integration site family, member 2Bb	0.015
irx3a	iroquois homeobox protein 3a	0.015
tmpoa	thymopoietin a	0.015
gata5	GATA-binding protein 5	0.015
meis3	myeloid ecotropic viral integration site 3	0.014
bmp2b	bone morphogenetic protein 2b	0.014
wnt7ba	wingless-type MMTV integration site family, member 7Ba	0.014
rarab	retinoic acid receptor, alpha b	0.014
gpc4	glypican 4	0.014
tnfsf10l	tumor necrosis factor (ligand) superfamily, member 10 like	0.014
has2	hyaluronan synthase 2	0.014
fgf8a	fibroblast growth factor 8 a	0.014
etv5b	ets variant 5b	0.013
LOC100000687	signal peptide, CUB and EGF-like domain-containing protein 3-like	0.013
dcn	decorin	0.012
gli3	GLI-Kruppel family member GLI3	0.012
her6	hairy-related 6	0.012
cenph	centromere protein H	0.012
id1	inhibitor of DNA binding 1	0.012
lratb	lecithin retinol acyltransferase b (phosphatidylcholine--retinol O-acyltransferase b)	0.012
grem1a	gremlin 1 homolog a, cysteine knot superfamily (Xenopus laevis)	0.012
ptpra	protein tyrosine phosphatase, receptor type, A	0.012
mycn	v-myc myelocytomatosis viral related oncogene, neuroblastoma derived (avian)	0.012
cdkn1c	cyclin-dependent kinase inhibitor 1C (p57, Kip2)	0.012
six4b	sine oculis homeobox homolog 4b	0.012
sox19a	SRY-box containing gene 19a	0.012
pard6gb	par-6 partitioning defective 6 homolog gamma B (C. elegans)	0.012
wnt3	wingless-type MMTV integration site family, member 3	0.011
dpysl5a	dihydropyrimidinase-like 5a	0.011
ext1a	exostoses (multiple) 1a	0.011
ep300b	E1A binding protein p300 b	0.011
lhx1a	LIM homeobox 1a	0.011
hes6	hairy and enhancer of split 6 (Drosophila)	0.011
zic1	zic family member 1 (odd-paired homolog, Drosophila)	0.011
ptprsa	protein tyrosine phosphatase, receptor type, s, a	0.011
grhl2b	grainyhead-like 2b (Drosophila)	0.011
nkx6.1	NK6 transcription factor related, locus 1 (Drosophila)	0.011
fzd8b	frizzled homolog 8b	0.011
pea3	ETS-domain transcription factor pea3	0.011
si:ch211-57k11.10	si:ch211-57k11.10	0.011
mapk1	mitogen-activated protein kinase 1	0.010
zic2b	zic family member 2 (odd-paired homolog, Drosophila) b	0.010
angptl2	angiopoietin-like 2	0.010