IMP

Process View

Mus musculus

12 genes annotated in mouse

intestinal epithelial cell development

The process whose specific outcome is the progression of a columnar/cuboidal epithelial cell of the intestine over time, from its formation to the mature structure.

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Known genes in the process in mouse Include functional analogs

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Gene Predictions

Click on a gene's description to view its network relationships with genes known to be involved in "intestinal epithelial cell development"

Show only novel predictions Show only unknown genes Highlight genes with functional analogs involved in "intestinal epithelial cell development" (in gray)

Name	Description	Probability	Func Analog Organism
Hoxb5	homeobox B5	0.935	Mouse
Hoxa5	homeobox A5	0.823
Hoxa2	homeobox A2	0.756
Fgfr2	fibroblast growth factor receptor 2	0.668
Hoxb6	homeobox B6	0.665	Mouse
Hoxc4	homeobox C4	0.664	Mouse
Pbx1	pre B-cell leukemia transcription factor 1	0.610
Shh	sonic hedgehog	0.587
Hoxa9	homeobox A9	0.573
Hoxb3	homeobox B3	0.544
Hoxd3	homeobox D3	0.487
Hoxd9	homeobox D9	0.431
Hoxc5	homeobox C5	0.400	Mouse
Hand2	heart and neural crest derivatives expressed transcript 2	0.358
Ddx60	DEAD (Asp-Glu-Ala-Asp) box polypeptide 60	0.337
Hoxb9	homeobox B9	0.329
Tcfap2a	transcription factor AP-2, alpha	0.325
Hand1	heart and neural crest derivatives expressed transcript 1	0.288
Hoxb4	homeobox B4	0.282	Mouse
Hoxc6	homeobox C6	0.279	Mouse
Sox9	SRY-box containing gene 9	0.278
Trp63	transformation related protein 63	0.266
Foxa2	forkhead box A2	0.258
Hoxa13	homeobox A13	0.247
Hoxc8	homeobox C8	0.240	Mouse
Hoxa10	homeobox A10	0.235
Hoxd10	homeobox D10	0.218
Hoxa3	homeobox A3	0.211
Krt14	keratin 14	0.210
Fgf8	fibroblast growth factor 8	0.193
Hoxa4	homeobox A4	0.189	Mouse
Hoxd4	homeobox D4	0.188	Mouse
Hoxb2	homeobox B2	0.186
Tcfap2c	transcription factor AP-2, gamma	0.165
Pitx1	paired-like homeodomain transcription factor 1	0.165
Ptpn11	protein tyrosine phosphatase, non-receptor type 11	0.155
Pthlh	parathyroid hormone-like peptide	0.148
Hoxa1	homeobox A1	0.143
Hoxd8	homeobox D8	0.141	Mouse
Tbx3	T-box 3	0.138
Twist2	twist homolog 2 (Drosophila)	0.130
Hoxd13	homeobox D13	0.124
Klf6	Kruppel-like factor 6	0.123	Mouse
Pax8	paired box gene 8	0.121
Foxc1	forkhead box C1	0.101
Gata6	GATA binding protein 6	0.100
Pax9	paired box gene 9	0.098
Gli2	GLI-Kruppel family member GLI2	0.090
Egfr	epidermal growth factor receptor	0.088
Hoxd11	homeobox D11	0.086
Jun	Jun oncogene	0.080
Foxd1	forkhead box D1	0.078
Adam17	a disintegrin and metallopeptidase domain 17	0.076
Hoxc9	homeobox C9	0.074
Msx1	homeobox, msh-like 1	0.073
Uncx	UNC homeobox	0.072
Klf4	Kruppel-like factor 4 (gut)	0.070	Mouse
Kras	v-Ki-ras2 Kirsten rat sarcoma viral oncogene homolog	0.070
Gata5	GATA binding protein 5	0.067
Pitx2	paired-like homeodomain transcription factor 2	0.064
Zfp185	zinc finger protein 185	0.063
Rhob	ras homolog gene family, member B	0.063
Hoxb8	homeobox B8	0.061	Mouse
Tbx15	T-box 15	0.060
Klf3	Kruppel-like factor 3 (basic)	0.060	Mouse
Bnc1	basonuclin 1	0.060
Nkx2-3	NK2 transcription factor related, locus 3 (Drosophila)	0.057	Mouse
Hif3a	hypoxia inducible factor 3, alpha subunit	0.056	Mouse
Pdx1	pancreatic and duodenal homeobox 1	0.055
Foxd2	forkhead box D2	0.055
Prrx1	paired related homeobox 1	0.052
Tbx1	T-box 1	0.050
Serpinb5	serine (or cysteine) peptidase inhibitor, clade B, member 5	0.049
Fos	FBJ osteosarcoma oncogene	0.046
Sim2	single-minded homolog 2 (Drosophila)	0.046	Mouse
Hoxa11	homeobox A11	0.045
Hey2	hairy/enhancer-of-split related with YRPW motif 2	0.044
Dusp1	dual specificity phosphatase 1	0.042
Meis1	Meis homeobox 1	0.041
Sall4	sal-like 4 (Drosophila)	0.041
Gjb4	gap junction protein, beta 4	0.041
Btg2	B-cell translocation gene 2, anti-proliferative	0.041
Cdk5r1	cyclin-dependent kinase 5, regulatory subunit 1 (p35)	0.040
Sall3	sal-like 3 (Drosophila)	0.040
Dkk2	dickkopf homolog 2 (Xenopus laevis)	0.039
Ascl1	achaete-scute complex homolog 1 (Drosophila)	0.039
Rxra	retinoid X receptor alpha	0.039
Gli3	GLI-Kruppel family member GLI3	0.039
Msx2	homeobox, msh-like 2	0.038
Mycn	v-myc myelocytomatosis viral related oncogene, neuroblastoma derived (avian)	0.038
Apc	adenomatosis polyposis coli	0.037
Tmprss2	transmembrane protease, serine 2	0.037
Sox7	SRY-box containing gene 7	0.036
Gata4	GATA binding protein 4	0.036
Zfp503	zinc finger protein 503	0.036
Sim1	single-minded homolog 1 (Drosophila)	0.035	Mouse
Nfib	nuclear factor I/B	0.034
Rdh10	retinol dehydrogenase 10 (all-trans)	0.033
Nkx6-1	NK6 homeobox 1	0.032
Cldn8	claudin 8	0.032
Tcf21	transcription factor 21	0.032
Barx2	BarH-like homeobox 2	0.031
Krt15	keratin 15	0.031
Six4	sine oculis-related homeobox 4 homolog (Drosophila)	0.031
Nr3c1	nuclear receptor subfamily 3, group C, member 1	0.031
Wnt6	wingless-related MMTV integration site 6	0.030
Phlda2	pleckstrin homology-like domain, family A, member 2	0.030
Bmpr1a	bone morphogenetic protein receptor, type 1A	0.030
Trim25	tripartite motif-containing 25	0.029
Foxe1	forkhead box E1	0.029
Tcf7l2	transcription factor 7-like 2, T-cell specific, HMG-box	0.028
Egln1	EGL nine homolog 1 (C. elegans)	0.028
Krt17	keratin 17	0.027
Ror1	receptor tyrosine kinase-like orphan receptor 1	0.027
Pcdh12	protocadherin 12	0.027
Fgf10	fibroblast growth factor 10	0.026
Cdx1	caudal type homeobox 1	0.026
Cdkn1b	cyclin-dependent kinase inhibitor 1B	0.026
Rab25	RAB25, member RAS oncogene family	0.026
Guca2a	guanylate cyclase activator 2a (guanylin)	0.026
Mpzl2	myelin protein zero-like 2	0.025
Ly6g6c	lymphocyte antigen 6 complex, locus G6C	0.025
Lhx1	LIM homeobox protein 1	0.025
Sox1	SRY-box containing gene 1	0.025
Cdh3	cadherin 3	0.025	Mouse
Mesp1	mesoderm posterior 1	0.025
Jak2	Janus kinase 2	0.025
Myog	myogenin	0.025
Sema5a	sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A	0.025
Cldn4	claudin 4	0.024
Ldb2	LIM domain binding 2	0.024
Wt1	Wilms tumor 1 homolog	0.024
Gata3	GATA binding protein 3	0.024
Tcf15	transcription factor 15	0.024
Grpr	gastrin releasing peptide receptor	0.024
Efnb2	ephrin B2	0.024
Ehf	ets homologous factor	0.024	Mouse
Ahr	aryl-hydrocarbon receptor	0.023
Tbx5	T-box 5	0.023
Zfhx3	zinc finger homeobox 3	0.023
Pou5f1	POU domain, class 5, transcription factor 1	0.023
Hba-x	hemoglobin X, alpha-like embryonic chain in Hba complex	0.023
Ntf3	neurotrophin 3	0.023
Nfe2l2	nuclear factor, erythroid derived 2, like 2	0.023
Pkp1	plakophilin 1	0.022
Vegfa	vascular endothelial growth factor A	0.022
Foxa1	forkhead box A1	0.022
Dlx1	distal-less homeobox 1	0.022
Ihh	Indian hedgehog	0.022
Clcnka	chloride channel Ka	0.022
Alx4	aristaless-like homeobox 4	0.022
Mdfi	MyoD family inhibitor	0.022
Hmga2	high mobility group AT-hook 2	0.022
Ctnnb1	catenin (cadherin associated protein), beta 1	0.022
Cxadr	coxsackie virus and adenovirus receptor	0.022
Edn3	endothelin 3	0.022
S100a14	S100 calcium binding protein A14	0.022
Slc32a1	solute carrier family 32 (GABA vesicular transporter), member 1	0.022
Nrk	Nik related kinase	0.021
Nkx2-5	NK2 transcription factor related, locus 5 (Drosophila)	0.021	Mouse
Meis2	Meis homeobox 2	0.021
Tlx3	T-cell leukemia, homeobox 3	0.021
Pten	phosphatase and tensin homolog	0.021
Hoxb1	homeobox B1	0.020
Hoxa7	homeobox A7	0.019	Mouse
Sox2	SRY-box containing gene 2	0.019
Dlx2	distal-less homeobox 2	0.019
Myod1	myogenic differentiation 1	0.019
Pik3r1	phosphatidylinositol 3-kinase, regulatory subunit, polypeptide 1 (p85 alpha)	0.019
Efna2	ephrin A2	0.019
Cldn7	claudin 7	0.019
Samd9l	sterile alpha motif domain containing 9-like	0.019
Col11a1	collagen, type XI, alpha 1	0.018
Wnt11	wingless-related MMTV integration site 11	0.018
Foxc2	forkhead box C2	0.018
Pdzk1ip1	PDZK1 interacting protein 1	0.018
Gata2	GATA binding protein 2	0.018
Tcfap2b	transcription factor AP-2 beta	0.018
Rarb	retinoic acid receptor, beta	0.018
Six2	sine oculis-related homeobox 2 homolog (Drosophila)	0.018
Gdnf	glial cell line derived neurotrophic factor	0.018
Efna5	ephrin A5	0.018
Vhl	von Hippel-Lindau tumor suppressor	0.018
Ntn1	netrin 1	0.017
Efnb1	ephrin B1	0.017
Cdh6	cadherin 6	0.017
Kcnj15	potassium inwardly-rectifying channel, subfamily J, member 15	0.017
Lhx5	LIM homeobox protein 5	0.017
Has2	hyaluronan synthase 2	0.017
Rara	retinoic acid receptor, alpha	0.017
Dlx5	distal-less homeobox 5	0.017
Rbms1	RNA binding motif, single stranded interacting protein 1	0.017
Fgf15	fibroblast growth factor 15	0.017
Oit1	oncoprotein induced transcript 1	0.017
Zic1	zinc finger protein of the cerebellum 1	0.017
Foxb1	forkhead box B1	0.017
Ebf3	early B-cell factor 3	0.017
Foxd3	forkhead box D3	0.017
Gsc	goosecoid homeobox	0.017
Cftr	cystic fibrosis transmembrane conductance regulator homolog	0.017
Foxf1a	forkhead box F1a	0.016
Zfhx4	zinc finger homeodomain 4	0.016
Glra1	glycine receptor, alpha 1 subunit	0.016
Gna13	guanine nucleotide binding protein, alpha 13	0.016
Rfx2	regulatory factor X, 2 (influences HLA class II expression)	0.016
Dkk1	dickkopf homolog 1 (Xenopus laevis)	0.016
Sox4	SRY-box containing gene 4	0.016
Klf7	Kruppel-like factor 7 (ubiquitous)	0.016	Mouse
Mecom	MDS1 and EVI1 complex locus	0.016
Lgals7	lectin, galactose binding, soluble 7	0.016
Isl1	ISL1 transcription factor, LIM/homeodomain	0.016
Ctnnd1	catenin (cadherin associated protein), delta 1	0.016
Myl2	myosin, light polypeptide 2, regulatory, cardiac, slow	0.016
Otp	orthopedia homolog (Drosophila)	0.015
Plac1	placental specific protein 1	0.015
Sox3	SRY-box containing gene 3	0.015
Ctf1	cardiotrophin 1	0.015
Ceacam10	carcinoembryonic antigen-related cell adhesion molecule 10	0.015
Rarg	retinoic acid receptor, gamma	0.015
Prr15	proline rich 15	0.015
Krt7	keratin 7	0.015
Nr4a1	nuclear receptor subfamily 4, group A, member 1	0.015
Krtdap	keratinocyte differentiation associated protein	0.015
Grem1	gremlin 1	0.015
Itgb1	integrin beta 1 (fibronectin receptor beta)	0.015
Irs3	insulin receptor substrate 3	0.014
Dlk1	delta-like 1 homolog (Drosophila)	0.014
Arnt2	aryl hydrocarbon receptor nuclear translocator 2	0.014
Ar	androgen receptor	0.014
Gm13290	predicted gene 13290	0.014
Fzd4	frizzled homolog 4 (Drosophila)	0.014
Amotl2	angiomotin-like 2	0.014
Lamc2	laminin, gamma 2	0.014
Evx2	even skipped homeotic gene 2 homolog	0.014
Gfra3	glial cell line derived neurotrophic factor family receptor alpha 3	0.014
Sprr2f	small proline-rich protein 2F	0.014
Hif1a	hypoxia inducible factor 1, alpha subunit	0.014
Dcc	deleted in colorectal carcinoma	0.014
Lalba	lactalbumin, alpha	0.014
Bmpr1b	bone morphogenetic protein receptor, type 1B	0.014
Bglap-rs1	bone gamma-carboxyglutamate protein, related sequence 1	0.014
Tcfcp2l1	transcription factor CP2-like 1	0.013
Lama3	laminin, alpha 3	0.013
Col17a1	collagen, type XVII, alpha 1	0.013
Acpp	acid phosphatase, prostate	0.013
Nos3	nitric oxide synthase 3, endothelial cell	0.013
Tgfbr2	transforming growth factor, beta receptor II	0.013
Hmx1	H6 homeobox 1	0.013
Bmp4	bone morphogenetic protein 4	0.013
Zfp36	zinc finger protein 36	0.013
Smad5	MAD homolog 5 (Drosophila)	0.013
Ror2	receptor tyrosine kinase-like orphan receptor 2	0.013
Six1	sine oculis-related homeobox 1 homolog (Drosophila)	0.013
Gpr50	G-protein-coupled receptor 50	0.013
Rprm	reprimo, TP53 dependent G2 arrest mediator candidate	0.013
Wnt4	wingless-related MMTV integration site 4	0.013
Tmem54	transmembrane protein 54	0.013
Mst1r	macrophage stimulating 1 receptor (c-met-related tyrosine kinase)	0.013
Fhdc1	FH2 domain containing 1	0.013
Nfia	nuclear factor I/A	0.013
Irf2bp2	interferon regulatory factor 2 binding protein 2	0.012
Tbx2	T-box 2	0.012
Gja5	gap junction protein, alpha 5	0.012
Slc35a3	solute carrier family 35 (UDP-N-acetylglucosamine (UDP-GlcNAc) transporter), member 3	0.012
Irx3	Iroquois related homeobox 3 (Drosophila)	0.012
Nf1	neurofibromatosis 1	0.012
Scn9a	sodium channel, voltage-gated, type IX, alpha	0.012
Neurog1	neurogenin 1	0.012
Timp3	tissue inhibitor of metalloproteinase 3	0.012
Epor	erythropoietin receptor	0.012
She	src homology 2 domain-containing transforming protein E	0.012
Dsg2	desmoglein 2	0.012
Mab21l2	mab-21-like 2 (C. elegans)	0.012
En1	engrailed 1	0.012
Hs3st3a1	heparan sulfate (glucosamine) 3-O-sulfotransferase 3A1	0.012
Col22a1	collagen, type XXII, alpha 1	0.012
Grb10	growth factor receptor bound protein 10	0.012
Lef1	lymphoid enhancer binding factor 1	0.012
Vax1	ventral anterior homeobox containing gene 1	0.012
Tead3	TEA domain family member 3	0.011
Arnt	aryl hydrocarbon receptor nuclear translocator	0.011
Gli1	GLI-Kruppel family member GLI1	0.011
Zfp36l1	zinc finger protein 36, C3H type-like 1	0.011
Fgf17	fibroblast growth factor 17	0.011
Odf3	outer dense fiber of sperm tails 3	0.011
Kcnmb1	potassium large conductance calcium-activated channel, subfamily M, beta member 1	0.011
Tacstd2	tumor-associated calcium signal transducer 2	0.011
Frk	fyn-related kinase	0.011
Kcnk3	potassium channel, subfamily K, member 3	0.011
Hnf4a	hepatic nuclear factor 4, alpha	0.011
Fam83h	family with sequence similarity 83, member H	0.011
Col12a1	collagen, type XII, alpha 1	0.011
Adra2a	adrenergic receptor, alpha 2a	0.011
Hoxb13	homeobox B13	0.011
Ibsp	integrin binding sialoprotein	0.011
Meox2	mesenchyme homeobox 2	0.011
Cdsn	corneodesmosin	0.011
Irx5	Iroquois related homeobox 5 (Drosophila)	0.011
Hes2	hairy and enhancer of split 2 (Drosophila)	0.011
Eif2ak2	eukaryotic translation initiation factor 2-alpha kinase 2	0.011
Dlx6	distal-less homeobox 6	0.011
Emp2	epithelial membrane protein 2	0.011
Psg17	pregnancy specific glycoprotein 17	0.011
Ppy	pancreatic polypeptide	0.011
Hsd11b2	hydroxysteroid 11-beta dehydrogenase 2	0.011
Fabp9	fatty acid binding protein 9, testis	0.011
Foxh1	forkhead box H1	0.011
Galnt3	UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 3	0.011
Rod1	ROD1 regulator of differentiation 1 (S. pombe)	0.011
Pla2g10	phospholipase A2, group X	0.011
Fzd6	frizzled homolog 6 (Drosophila)	0.010
Prph	peripherin	0.010
Cyp11a1	cytochrome P450, family 11, subfamily a, polypeptide 1	0.010
Zic4	zinc finger protein of the cerebellum 4	0.010
Krtap6-2	keratin associated protein 6-2	0.010
Xiap	X-linked inhibitor of apoptosis	0.010
En2	engrailed 2	0.010
Pax1	paired box gene 1	0.010
B4galnt2	beta-1,4-N-acetyl-galactosaminyl transferase 2	0.010
2210415F13Rik	RIKEN cDNA 2210415F13 gene	0.010
Pitx3	paired-like homeodomain transcription factor 3	0.010
Klf2	Kruppel-like factor 2 (lung)	0.010	Mouse
Dhh	desert hedgehog	0.010
Hist1h1t	histone cluster 1, H1t	0.010
Tmod3	tropomodulin 3	0.010
Krt35	keratin 35	0.010
Alx3	aristaless-like homeobox 3	0.010
Sox13	SRY-box containing gene 13	0.010
Smad6	MAD homolog 6 (Drosophila)	0.010