IMP
Process View
The network for 'mrna transcription from rna polymerase ii promoter' in your query organism is displayed on the left, if relationships are supported by the integrated data. Moving any of the genes in that network will simultaneously update the homologs in the networks displayed to the right (if they exist). Additionally, hovering over any nodes will highlight the identified functionally similar homologs in the other networks. Last, the bar above the networks allows you to remove/add additional organisms. Simily drag and drop the organism names in the desired order.
Multiple Organisms
mrna transcription from rna polymerase ii promoter
The cellular synthesis of messenger RNA (mRNA) from a DNA template by RNA polymerase II, originating at an RNA polymerase II promoter.
| Name | Description | Probability | Func Analog Organism |
|---|---|---|---|
| Nanog | Nanog homeobox | 0.998 | |
| Sox2 | SRY-box containing gene 2 | 0.991 | |
| Sall4 | sal-like 4 (Drosophila) | 0.990 | |
| Otx2 | orthodenticle homolog 2 (Drosophila) | 0.988 | |
| Sall3 | sal-like 3 (Drosophila) | 0.890 | |
| Esrrb | estrogen related receptor, beta | 0.803 | |
| Pax2 | paired box gene 2 | 0.752 | |
| Tcfcp2l1 | transcription factor CP2-like 1 | 0.717 | |
| Sall1 | sal-like 1 (Drosophila) | 0.675 | |
| Pax6 | paired box gene 6 | 0.658 | |
| Ntrk2 | neurotrophic tyrosine kinase, receptor, type 2 | 0.605 | |
| Emx1 | empty spiracles homolog 1 (Drosophila) | 0.596 | |
| Smarca4 | SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 | 0.477 | |
| Bdnf | brain derived neurotrophic factor | 0.412 | |
| Chd7 | chromodomain helicase DNA binding protein 7 | 0.408 | |
| Atoh7 | atonal homolog 7 (Drosophila) | 0.399 | |
| Otx1 | orthodenticle homolog 1 (Drosophila) | 0.330 | |
| Trp53 | transformation related protein 53 | 0.326 | |
| Tlx3 | T-cell leukemia, homeobox 3 | 0.324 | |
| Ush1g | Usher syndrome 1G homolog (human) | 0.320 | |
| Hmx3 | H6 homeobox 3 | 0.316 | |
| Ikzf1 | IKAROS family zinc finger 1 | 0.305 | |
| Cdk5r2 | cyclin-dependent kinase 5, regulatory subunit 2 (p39) | 0.278 | |
| Nr0b1 | nuclear receptor subfamily 0, group B, member 1 | 0.271 | |
| Msx2 | homeobox, msh-like 2 | 0.263 | |
| Lef1 | lymphoid enhancer binding factor 1 | 0.257 | |
| Pou5f1 | POU domain, class 5, transcription factor 1 | 0.251 | |
| Alx4 | aristaless-like homeobox 4 | 0.245 | |
| Insm1 | insulinoma-associated 1 | 0.241 | |
| Mta1 | metastasis associated 1 | 0.232 | |
| Kcnj10 | potassium inwardly-rectifying channel, subfamily J, member 10 | 0.231 | |
| Zic2 | zinc finger protein of the cerebellum 2 | 0.229 | |
| Fgfr2 | fibroblast growth factor receptor 2 | 0.210 | |
| En1 | engrailed 1 | 0.206 | |
| Vax1 | ventral anterior homeobox containing gene 1 | 0.202 | |
| Tceb3 | transcription elongation factor B (SIII), polypeptide 3 | 0.199 | |
| Lhx3 | LIM homeobox protein 3 | 0.196 | |
| Cbfb | core binding factor beta | 0.184 | |
| S1pr2 | sphingosine-1-phosphate receptor 2 | 0.181 | |
| Atoh1 | atonal homolog 1 (Drosophila) | 0.179 | |
| Tbx10 | T-box 10 | 0.177 | |
| Sox3 | SRY-box containing gene 3 | 0.174 | |
| Hes5 | hairy and enhancer of split 5 (Drosophila) | 0.166 | |
| Slc26a4 | solute carrier family 26, member 4 | 0.164 | |
| Kcne1 | potassium voltage-gated channel, Isk-related subfamily, member 1 | 0.163 | |
| Mll1 | myeloid/lymphoid or mixed-lineage leukemia 1 | 0.160 | |
| Hes1 | hairy and enhancer of split 1 (Drosophila) | 0.159 | |
| Nacc1 | nucleus accumbens associated 1, BEN and BTB (POZ) domain containing | 0.156 | |
| Srrm4 | serine/arginine repetitive matrix 4 | 0.152 | |
| Grxcr1 | glutaredoxin, cysteine rich 1 | 0.152 | |
| Gli3 | GLI-Kruppel family member GLI3 | 0.149 | |
| Fgfr3 | fibroblast growth factor receptor 3 | 0.148 | |
| Sox1 | SRY-box containing gene 1 | 0.147 | |
| Ngfr | nerve growth factor receptor (TNFR superfamily, member 16) | 0.145 | |
| Tal1 | T-cell acute lymphocytic leukemia 1 | 0.139 | |
| Rax | retina and anterior neural fold homeobox | 0.138 | |
| Foxg1 | forkhead box G1 | 0.137 | |
| Hand1 | heart and neural crest derivatives expressed transcript 1 | 0.135 | |
| Gdf11 | growth differentiation factor 11 | 0.135 | |
| Isl1 | ISL1 transcription factor, LIM/homeodomain | 0.135 | |
| Pten | phosphatase and tensin homolog | 0.133 | |
| Ep400 | E1A binding protein p400 | 0.132 | |
| Lhx1 | LIM homeobox protein 1 | 0.127 | |
| Arid1a | AT rich interactive domain 1A (SWI-like) | 0.122 | |
| Shh | sonic hedgehog | 0.119 | |
| Ascl1 | achaete-scute complex homolog 1 (Drosophila) | 0.116 | |
| Neurod1 | neurogenic differentiation 1 | 0.110 | |
| Ntf3 | neurotrophin 3 | 0.109 | |
| Cdh23 | cadherin 23 (otocadherin) | 0.102 | |
| Foxd2 | forkhead box D2 | 0.102 | |
| Gatad2b | GATA zinc finger domain containing 2B | 0.101 | |
| Arid3b | AT rich interactive domain 3B (BRIGHT-like) | 0.097 | |
| Pde6b | phosphodiesterase 6B, cGMP, rod receptor, beta polypeptide | 0.095 | |
| Smarcc1 | SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1 | 0.094 | |
| Foxn1 | forkhead box N1 | 0.091 | |
| Rag2 | recombination activating gene 2 | 0.088 | |
| Fmnl1 | formin-like 1 | 0.086 | |
| Gata1 | GATA binding protein 1 | 0.086 | |
| Phox2a | paired-like homeobox 2a | 0.084 | |
| Alx3 | aristaless-like homeobox 3 | 0.084 | |
| Cdx1 | caudal type homeobox 1 | 0.082 | |
| Wnt6 | wingless-related MMTV integration site 6 | 0.082 | |
| Atp2b2 | ATPase, Ca++ transporting, plasma membrane 2 | 0.081 | |
| Fgf8 | fibroblast growth factor 8 | 0.077 | |
| Alx1 | ALX homeobox 1 | 0.077 | |
| Fbrs | fibrosin | 0.074 | |
| Dlx1 | distal-less homeobox 1 | 0.074 | |
| Emx2 | empty spiracles homolog 2 (Drosophila) | 0.073 | |
| Socs1 | suppressor of cytokine signaling 1 | 0.072 | |
| Six3 | sine oculis-related homeobox 3 homolog (Drosophila) | 0.071 | |
| Nr2e1 | nuclear receptor subfamily 2, group E, member 1 | 0.070 | |
| Wnt7b | wingless-related MMTV integration site 7B | 0.069 | |
| Lmx1b | LIM homeobox transcription factor 1 beta | 0.067 | |
| Hira | histone cell cycle regulation defective homolog A (S. cerevisiae) | 0.065 | |
| Mycn | v-myc myelocytomatosis viral related oncogene, neuroblastoma derived (avian) | 0.064 | |
| Snai1 | snail homolog 1 (Drosophila) | 0.064 | |
| Gata3 | GATA binding protein 3 | 0.063 | |
| Rnf2 | ring finger protein 2 | 0.062 | |
| Srebf2 | sterol regulatory element binding factor 2 | 0.061 | |
| Fgf15 | fibroblast growth factor 15 | 0.060 |
Loading network...
Homo sapiens
| Name | Description | Probability | Func Analog Organism |
|---|---|---|---|
| FOXD3 | forkhead box D3 | 0.627 | |
| WWP2 | WW domain containing E3 ubiquitin protein ligase 2 | 0.596 | |
| CEBPG | CCAAT/enhancer binding protein (C/EBP), gamma | 0.296 | |
| PAX3 | paired box 3 | 0.189 | |
| POU3F2 | POU class 3 homeobox 2 | 0.143 | |
| POU5F1 | POU class 5 homeobox 1 | 0.142 | |
| SOX2 | SRY (sex determining region Y)-box 2 | 0.124 | |
| SMAD7 | SMAD family member 7 | 0.090 | |
| CDK19 | cyclin-dependent kinase 19 | 0.073 | |
| MKL1 | megakaryoblastic leukemia (translocation) 1 | 0.052 | |
| ATF3 | activating transcription factor 3 | 0.048 | |
| ATF4 | activating transcription factor 4 (tax-responsive enhancer element B67) | 0.040 | |
| LDB1 | LIM domain binding 1 | 0.038 | |
| RXRA | retinoid X receptor, alpha | 0.034 | |
| WWOX | WW domain containing oxidoreductase | 0.023 | |
| SEC24D | SEC24 family, member D (S. cerevisiae) | 0.020 | |
| SUPT5H | suppressor of Ty 5 homolog (S. cerevisiae) | 0.019 | |
| CTDP1 | CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) phosphatase, subunit 1 | 0.019 | |
| JUN | jun proto-oncogene | 0.017 | |
| HIPK2 | homeodomain interacting protein kinase 2 | 0.017 | |
| TCEA1 | transcription elongation factor A (SII), 1 | 0.016 | |
| MED10 | mediator complex subunit 10 | 0.015 | |
| MED29 | mediator complex subunit 29 | 0.014 | |
| EP300 | E1A binding protein p300 | 0.012 | |
| UBE2I | ubiquitin-conjugating enzyme E2I (UBC9 homolog, yeast) | 0.011 | |
| TAL1 | T-cell acute lymphocytic leukemia 1 | 0.011 | |
| DBP | D site of albumin promoter (albumin D-box) binding protein | 0.011 | |
| MYOD1 | myogenic differentiation 1 | 0.010 | |
| CEBPB | CCAAT/enhancer binding protein (C/EBP), beta | 0.010 | |
| MYOCD | myocardin | 0.010 |
Loading network...
Rattus norvegicus
| Name | Description | Probability | Func Analog Organism |
|---|---|---|---|
| Tagln | transgelin | 0.121 | |
| Myh9 | myosin, heavy chain 9, non-muscle | 0.080 | |
| Iqgap1 | IQ motif containing GTPase activating protein 1 | 0.071 | |
| Vasp | vasodilator-stimulated phosphoprotein | 0.055 | |
| Ece1 | endothelin converting enzyme 1 | 0.052 | |
| Actn1 | actinin, alpha 1 | 0.047 | |
| RGD1309543 | similar to 2310014H01Rik protein | 0.045 | |
| Fam38a | family with sequence similarity 38, member A | 0.037 | |
| Nos3 | nitric oxide synthase 3, endothelial cell | 0.035 | |
| Tpm2 | tropomyosin 2, beta | 0.034 | |
| Ahnak | AHNAK nucleoprotein | 0.028 | |
| Mcam | melanoma cell adhesion molecule | 0.028 | |
| Atf4 | activating transcription factor 4 (tax-responsive enhancer element B67) | 0.027 | |
| Sox7 | SRY (sex determining region Y)-box 7 | 0.026 | |
| Lmna | lamin A | 0.022 | |
| Ehd2 | EH-domain containing 2 | 0.021 | |
| Esam | endothelial cell adhesion molecule | 0.020 | |
| Myl9 | myosin, light chain 9, regulatory | 0.020 | |
| Lamc1 | laminin, gamma 1 | 0.019 | |
| Elk3 | ELK3, ETS-domain protein | 0.016 | |
| Tln1 | talin 1 | 0.016 | |
| Lamb2 | laminin, beta 2 | 0.016 | |
| Pdrg1 | p53 and DNA damage regulated 1 | 0.015 | |
| Dll4 | delta-like 4 (Drosophila) | 0.015 | |
| Flna | filamin A, alpha | 0.015 | |
| Cdh5 | cadherin 5 | 0.015 | |
| Pxn | paxillin | 0.014 | |
| Herpud1 | homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1 | 0.014 | |
| Tubb5 | tubulin, beta 5 | 0.014 | |
| Egfl7 | EGF-like-domain, multiple 7 | 0.013 | |
| Col4a2 | collagen, type IV, alpha 2 | 0.013 | |
| Chsy1 | chondroitin sulfate synthase 1 | 0.012 | |
| Hspb1 | heat shock protein 1 | 0.012 | |
| Plxnb2 | plexin B2 | 0.012 | |
| Agrn | agrin | 0.012 | |
| Ptbp1 | polypyrimidine tract binding protein 1 | 0.012 | |
| RGD1565927 | similar to 4631422O05Rik protein | 0.012 | |
| LOC686323 | similar to thyroid receptor-interacting protein 6 | 0.011 | |
| Fam129b | family with sequence similarity 129, member B | 0.011 | |
| Ppp1r15a | protein phosphatase 1, regulatory (inhibitor) subunit 15A | 0.011 | |
| Emcn | endomucin | 0.010 | |
| Nes | nestin | 0.010 |