IMP

Process View

Homo sapiens

2 genes annotated in human

spinal cord dorsal ventral patterning

The process that regulates the coordinated growth and differentiation that establishes the non-random dorsal-ventral spatial arrangement of the spinal cord.

Loading network...

In addition to gene-name show these genes:

Known genes in the process in human Include functional analogs

Network Filters

Minimum relationship confidence:

Maximum number of genes:

Highlight known relationships in gold.

Graphical Options

Adjust edge length:

Adjust node size:

Fixed layout

Black background

Low confidence color:

Med confidence color:

High confidence color:

Hide the legend in the network

Save Options

Gene Predictions

Click on a gene's description to view its network relationships with genes known to be involved in "spinal cord dorsal ventral patterning"

Show only novel predictions Show only unknown genes Highlight genes with functional analogs involved in "spinal cord dorsal ventral patterning" (in gray)

Name	Description	Probability	Func Analog Organism
SUFU	suppressor of fused homolog (Drosophila)	1.000	Mouse
GLI1	GLI family zinc finger 1	1.000	Zebrafish
NOTCH1	notch 1	1.000
RCN3	reticulocalbin 3, EF-hand calcium binding domain	1.000
NOTCH3	notch 3	1.000
PEX26	peroxisomal biogenesis factor 26	0.998
QPRT	quinolinate phosphoribosyltransferase	0.973
MID1IP1	MID1 interacting protein 1 (gastrulation specific G12 homolog (zebrafish))	0.967
ZNF764	zinc finger protein 764	0.952
STK36	serine/threonine kinase 36	0.951
NOTCH2	notch 2	0.934
GLIS3	GLIS family zinc finger 3	0.888
ZNF263	zinc finger protein 263	0.765
ATN1	atrophin 1	0.758
VHL	von Hippel-Lindau tumor suppressor	0.610
BMP1	bone morphogenetic protein 1	0.431
GFI1B	growth factor independent 1B transcription repressor	0.400
RBPJ	recombination signal binding protein for immunoglobulin kappa J region	0.338
GLI3	GLI family zinc finger 3	0.261	Mouse
SKI	v-ski sarcoma viral oncogene homolog (avian)	0.172
KRTAP4-12	keratin associated protein 4-12	0.158
ZIC1	Zic family member 1 (odd-paired homolog, Drosophila)	0.124
JAG2	jagged 2	0.106	Human
LMX1A	LIM homeobox transcription factor 1, alpha	0.078
PDX1	pancreatic and duodenal homeobox 1	0.073
CAV2	caveolin 2	0.070
BAIAP2	BAI1-associated protein 2	0.066
MAML1	mastermind-like 1 (Drosophila)	0.060
EFNB2	ephrin-B2	0.060
BHLHE23	basic helix-loop-helix family, member e23	0.056
JAG1	jagged 1	0.056	Human
TCF4	transcription factor 4	0.051
FBLN1	fibulin 1	0.051
NEUROD1	neurogenic differentiation 1	0.050
LHX2	LIM homeobox 2	0.047
HRG	histidine-rich glycoprotein	0.045
HEY1	hairy/enhancer-of-split related with YRPW motif 1	0.044
LTBP4	latent transforming growth factor beta binding protein 4	0.042
LBX1	ladybird homeobox 1	0.036
AGRN	agrin	0.035
TRIP6	thyroid hormone receptor interactor 6	0.034
MEGF11	multiple EGF-like-domains 11	0.033
HOXD12	homeobox D12	0.033
XIAP	X-linked inhibitor of apoptosis	0.032
GLI2	GLI family zinc finger 2	0.032	Mouse
EGFL7	EGF-like-domain, multiple 7	0.031
ADAM17	ADAM metallopeptidase domain 17	0.030
LTBP1	latent transforming growth factor beta binding protein 1	0.030
NELL2	NEL-like 2 (chicken)	0.030
EXOC3L2	exocyst complex component 3-like 2	0.030
ISL1	ISL LIM homeobox 1	0.027
ZIC2	Zic family member 2 (odd-paired homolog, Drosophila)	0.025
PKD2	polycystic kidney disease 2 (autosomal dominant)	0.025
DLL4	delta-like 4 (Drosophila)	0.025
TP73	tumor protein p73	0.024
PCSK1N	proprotein convertase subtilisin/kexin type 1 inhibitor	0.023
RAD54L2	RAD54-like 2 (S. cerevisiae)	0.022
DRD2	dopamine receptor D2	0.022
FGF3	fibroblast growth factor 3	0.022
ITGAV	integrin, alpha V (vitronectin receptor, alpha polypeptide, antigen CD51)	0.022
SLC30A3	solute carrier family 30 (zinc transporter), member 3	0.022
LAMA5	laminin, alpha 5	0.022
SOX2	SRY (sex determining region Y)-box 2	0.022
DLL3	delta-like 3 (Drosophila)	0.021	Human
SIX3	SIX homeobox 3	0.021
WNT10A	wingless-type MMTV integration site family, member 10A	0.021
EPAS1	endothelial PAS domain protein 1	0.021
MEGF6	multiple EGF-like-domains 6	0.021
NELL1	NEL-like 1 (chicken)	0.021
MXRA5	matrix-remodelling associated 5	0.021
NKX2-5	NK2 transcription factor related, locus 5 (Drosophila)	0.021
WWP1	WW domain containing E3 ubiquitin protein ligase 1	0.021
PYY	peptide YY	0.021
MNX1	motor neuron and pancreas homeobox 1	0.021
VAX2	ventral anterior homeobox 2	0.020
HOXC11	homeobox C11	0.020
IPO13	importin 13	0.020
FEV	FEV (ETS oncogene family)	0.020
GIGYF1	GRB10 interacting GYF protein 1	0.020
USHBP1	Usher syndrome 1C binding protein 1	0.020
HEG1	HEG homolog 1 (zebrafish)	0.019
PAM	peptidylglycine alpha-amidating monooxygenase	0.019
MSX1	msh homeobox 1	0.019
ABCC8	ATP-binding cassette, sub-family C (CFTR/MRP), member 8	0.019
SOX1	SRY (sex determining region Y)-box 1	0.019
ADAMTSL4	ADAMTS-like 4	0.018
HES5	hairy and enhancer of split 5 (Drosophila)	0.018
EFEMP1	EGF containing fibulin-like extracellular matrix protein 1	0.018
HOXC8	homeobox C8	0.018
NKX2-2	NK2 homeobox 2	0.018	Mouse
AMN	amnionless homolog (mouse)	0.018
TAL1	T-cell acute lymphocytic leukemia 1	0.017
FGF4	fibroblast growth factor 4	0.017
HOXB13	homeobox B13	0.017
RUNDC3A	RUN domain containing 3A	0.017
NEDD9	neural precursor cell expressed, developmentally down-regulated 9	0.017
PAX6	paired box 6	0.017	Mouse
POU3F1	POU class 3 homeobox 1	0.017
FIBCD1	fibrinogen C domain containing 1	0.017
CACNB1	calcium channel, voltage-dependent, beta 1 subunit	0.017
SOX11	SRY (sex determining region Y)-box 11	0.017
PDZD4	PDZ domain containing 4	0.017
PTH2	parathyroid hormone 2	0.017
GBX2	gastrulation brain homeobox 2	0.016
ATXN7	ataxin 7	0.016
CHGA	chromogranin A (parathyroid secretory protein 1)	0.016
HOXD9	homeobox D9	0.016
CLDN5	claudin 5	0.016
EFNA2	ephrin-A2	0.016
CDX2	caudal type homeobox 2	0.016
LHFP	lipoma HMGIC fusion partner	0.016
OTP	orthopedia homeobox	0.016
MYT1	myelin transcription factor 1	0.016
OLIG2	oligodendrocyte lineage transcription factor 2	0.016
DIO3	deiodinase, iodothyronine, type III	0.016
HAND2	heart and neural crest derivatives expressed 2	0.016
PRUNE2	prune homolog 2 (Drosophila)	0.016
ALX4	ALX homeobox 4	0.015
FZD6	frizzled homolog 6 (Drosophila)	0.015
FZD10	frizzled homolog 10 (Drosophila)	0.015
LHX5	LIM homeobox 5	0.015
CDH11	cadherin 11, type 2, OB-cadherin (osteoblast)	0.015
PCSK2	proprotein convertase subtilisin/kexin type 2	0.015
SLIT1	slit homolog 1 (Drosophila)	0.015
MYOD1	myogenic differentiation 1	0.015
POU3F3	POU class 3 homeobox 3	0.015
HOXC5	homeobox C5	0.015
NFIX	nuclear factor I/X (CCAAT-binding transcription factor)	0.015
BEGAIN	brain-enriched guanylate kinase-associated homolog (rat)	0.015
NKX3-2	NK3 homeobox 2	0.015
CSPG5	chondroitin sulfate proteoglycan 5 (neuroglycan C)	0.015
KLHL35	kelch-like 35 (Drosophila)	0.015
NTRK2	neurotrophic tyrosine kinase, receptor, type 2	0.014
NPR1	natriuretic peptide receptor A/guanylate cyclase A (atrionatriuretic peptide receptor A)	0.014
SAMD11	sterile alpha motif domain containing 11	0.014
MEGF8	multiple EGF-like-domains 8	0.014
NR2E1	nuclear receptor subfamily 2, group E, member 1	0.014
CRHR1	corticotropin releasing hormone receptor 1	0.014
ALX3	ALX homeobox 3	0.014
ZFPM2	zinc finger protein, multitype 2	0.014
JPH3	junctophilin 3	0.014
GSX2	GS homeobox 2	0.014
ARHGDIG	Rho GDP dissociation inhibitor (GDI) gamma	0.014
CALCR	calcitonin receptor	0.014
OTX1	orthodenticle homeobox 1	0.014
PLK2	polo-like kinase 2	0.014
SLC17A7	solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 7	0.014
RUNX1T1	runt-related transcription factor 1; translocated to, 1 (cyclin D-related)	0.014
GATA5	GATA binding protein 5	0.014
HOXD13	homeobox D13	0.014
GJD2	gap junction protein, delta 2, 36kDa	0.014
RAX	retina and anterior neural fold homeobox	0.013
NTM	neurotrimin	0.013
GPR64	G protein-coupled receptor 64	0.013
FLT4	fms-related tyrosine kinase 4	0.013
C1QL1	complement component 1, q subcomponent-like 1	0.013
NKX6-1	NK6 homeobox 1	0.013	Mouse
ACVR1	activin A receptor, type I	0.013
HOXD4	homeobox D4	0.013
HOXD1	homeobox D1	0.013
TBX5	T-box 5	0.013
HES7	hairy and enhancer of split 7 (Drosophila)	0.013
ARX	aristaless related homeobox	0.013
NKPD1	NTPase, KAP family P-loop domain containing 1	0.013
WNT4	wingless-type MMTV integration site family, member 4	0.013
PAX2	paired box 2	0.013
EN1	engrailed homeobox 1	0.013
TTYH1	tweety homolog 1 (Drosophila)	0.013
HOXD11	homeobox D11	0.013
PPP1R1A	protein phosphatase 1, regulatory (inhibitor) subunit 1A	0.013
HOXC12	homeobox C12	0.013
CACNA1A	calcium channel, voltage-dependent, P/Q type, alpha 1A subunit	0.013
ECEL1	endothelin converting enzyme-like 1	0.013
F3	coagulation factor III (thromboplastin, tissue factor)	0.013
PDGFC	platelet derived growth factor C	0.013
SPRY2	sprouty homolog 2 (Drosophila)	0.013
CHAT	choline O-acetyltransferase	0.012
HS3ST6	heparan sulfate (glucosamine) 3-O-sulfotransferase 6	0.012
FZD7	frizzled homolog 7 (Drosophila)	0.012
NFAT5	nuclear factor of activated T-cells 5, tonicity-responsive	0.012
CARD10	caspase recruitment domain family, member 10	0.012
TLX3	T-cell leukemia homeobox 3	0.012
ID4	inhibitor of DNA binding 4, dominant negative helix-loop-helix protein	0.012
POU4F3	POU class 4 homeobox 3	0.012
FOXD3	forkhead box D3	0.012
HOXD10	homeobox D10	0.012
PAX4	paired box 4	0.012
COL2A1	collagen, type II, alpha 1	0.012
SLC16A2	solute carrier family 16, member 2 (monocarboxylic acid transporter 8)	0.012
FOXF1	forkhead box F1	0.012
KCNQ2	potassium voltage-gated channel, KQT-like subfamily, member 2	0.012
PLP1	proteolipid protein 1	0.012
SOX18	SRY (sex determining region Y)-box 18	0.012
LMOD1	leiomodin 1 (smooth muscle)	0.012
HES2	hairy and enhancer of split 2 (Drosophila)	0.012
HNF1A	HNF1 homeobox A	0.012
CRLF1	cytokine receptor-like factor 1	0.012
NTSR1	neurotensin receptor 1 (high affinity)	0.012
POU3F4	POU class 3 homeobox 4	0.012
THBS4	thrombospondin 4	0.012
C3orf64	chromosome 3 open reading frame 64	0.012
HSD11B2	hydroxysteroid (11-beta) dehydrogenase 2	0.012
NFATC1	nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1	0.012
INHBB	inhibin, beta B	0.012
SLIT2	slit homolog 2 (Drosophila)	0.011
BNC2	basonuclin 2	0.011
MN1	meningioma (disrupted in balanced translocation) 1	0.011
SALL2	sal-like 2 (Drosophila)	0.011
EPHB3	EPH receptor B3	0.011
OAF	OAF homolog (Drosophila)	0.011
SMO	smoothened homolog (Drosophila)	0.011
EFCAB4B	EF-hand calcium binding domain 4B	0.011
SFRP1	secreted frizzled-related protein 1	0.011
LHX1	LIM homeobox 1	0.011
BRSK2	BR serine/threonine kinase 2	0.011
DLX4	distal-less homeobox 4	0.011
CRTAC1	cartilage acidic protein 1	0.011
TLX1	T-cell leukemia homeobox 1	0.011
MAB21L1	mab-21-like 1 (C. elegans)	0.011
SIX2	SIX homeobox 2	0.011
PRPH	peripherin	0.011
FOXE3	forkhead box E3	0.011
SPOCK1	sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 1	0.011
ITGA6	integrin, alpha 6	0.011
SLC16A11	solute carrier family 16, member 11 (monocarboxylic acid transporter 11)	0.011
KCNK9	potassium channel, subfamily K, member 9	0.011
LAMC3	laminin, gamma 3	0.011
SFRP5	secreted frizzled-related protein 5	0.011
SCARF2	scavenger receptor class F, member 2	0.011
SLC6A3	solute carrier family 6 (neurotransmitter transporter, dopamine), member 3	0.011
GSC	goosecoid homeobox	0.011
FOXA2	forkhead box A2	0.011
FNDC3B	fibronectin type III domain containing 3B	0.011
ADRA1B	adrenergic, alpha-1B-, receptor	0.011
GATA2	GATA binding protein 2	0.011
PRDM12	PR domain containing 12	0.011
CACNA1G	calcium channel, voltage-dependent, T type, alpha 1G subunit	0.011
NEUROG3	neurogenin 3	0.011
RIPPLY2	ripply2 homolog (zebrafish)	0.011
FOXL2	forkhead box L2	0.011
ISL2	ISL LIM homeobox 2	0.010
HOXA11	homeobox A11	0.010
MESP1	mesoderm posterior 1 homolog (mouse)	0.010
BARX1	BARX homeobox 1	0.010
TBX1	T-box 1	0.010
B4GALNT1	beta-1,4-N-acetyl-galactosaminyl transferase 1	0.010
CDK5R2	cyclin-dependent kinase 5, regulatory subunit 2 (p39)	0.010
EN2	engrailed homeobox 2	0.010
EMX2	empty spiracles homeobox 2	0.010
RYR3	ryanodine receptor 3	0.010
DCX	doublecortin	0.010
IGDCC3	immunoglobulin superfamily, DCC subclass, member 3	0.010
BMP7	bone morphogenetic protein 7	0.010
PALLD	palladin, cytoskeletal associated protein	0.010
INSM1	insulinoma-associated 1	0.010
VSX1	visual system homeobox 1	0.010
NEUROG2	neurogenin 2	0.010
LAMB1	laminin, beta 1	0.010
DCLK1	doublecortin-like kinase 1	0.010
CITED1	Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 1	0.010
NCK2	NCK adaptor protein 2	0.010
ASAP2	ArfGAP with SH3 domain, ankyrin repeat and PH domain 2	0.010
WNT6	wingless-type MMTV integration site family, member 6	0.010
COMP	cartilage oligomeric matrix protein	0.010
RERE	arginine-glutamic acid dipeptide (RE) repeats	0.010
TH	tyrosine hydroxylase	0.010
FOXN4	forkhead box N4	0.010	Mouse
SALL1	sal-like 1 (Drosophila)	0.010
JUB	jub, ajuba homolog (Xenopus laevis)	0.010
KNDC1	kinase non-catalytic C-lobe domain (KIND) containing 1	0.010
FOXG1	forkhead box G1	0.010