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Mus musculus

17 genes annotated in mouse

retinoic acid receptor signaling pathway

The series of molecular signals generated as a consequence of a retinoic acid receptor binding to one of its physiological ligands.

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Known genes in the process in mouse Include functional analogs

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Gene Predictions

Click on a gene's description to view its network relationships with genes known to be involved in "retinoic acid receptor signaling pathway"

Show only novel predictions Show only unknown genes Highlight genes with functional analogs involved in "retinoic acid receptor signaling pathway" (in gray)

Name	Description	Probability	Func Analog Organism
Nkx2-5	NK2 transcription factor related, locus 5 (Drosophila)	0.852
Tbx3	T-box 3	0.828	Mouse
Pitx2	paired-like homeodomain transcription factor 2	0.735	Zebrafish
Rxra	retinoid X receptor alpha	0.690
Rarg	retinoic acid receptor, gamma	0.545
Otx2	orthodenticle homolog 2 (Drosophila)	0.518
Pitx1	paired-like homeodomain transcription factor 1	0.496
Pbx1	pre B-cell leukemia transcription factor 1	0.362
Ascl1	achaete-scute complex homolog 1 (Drosophila)	0.355
Rara	retinoic acid receptor, alpha	0.333
Foxg1	forkhead box G1	0.304
Pax2	paired box gene 2	0.300
Cdx2	caudal type homeobox 2	0.223
Pax3	paired box gene 3	0.201
Ghr	growth hormone receptor	0.185
Neurod1	neurogenic differentiation 1	0.179	Mouse
Cyp26a1	cytochrome P450, family 26, subfamily a, polypeptide 1	0.166
Shh	sonic hedgehog	0.166
Pou4f2	POU domain, class 4, transcription factor 2	0.155
Hoxa9	homeobox A9	0.150
Foxc2	forkhead box C2	0.126
Runx1t1	runt-related transcription factor 1; translocated to, 1 (cyclin D-related)	0.124
Nr2f2	nuclear receptor subfamily 2, group F, member 2	0.110	Mouse
Gsc	goosecoid homeobox	0.102
Tbx5	T-box 5	0.097	Mouse
Lhx3	LIM homeobox protein 3	0.085
Nr5a1	nuclear receptor subfamily 5, group A, member 1	0.080
Neurod4	neurogenic differentiation 4	0.079	Mouse
Sox11	SRY-box containing gene 11	0.078
Btbd17	BTB (POZ) domain containing 17	0.074
Hcn4	hyperpolarization-activated, cyclic nucleotide-gated K+ 4	0.069
Nr2f1	nuclear receptor subfamily 2, group F, member 1	0.067	Mouse
Gdf11	growth differentiation factor 11	0.065
Tcfap2a	transcription factor AP-2, alpha	0.063
Skil	SKI-like	0.062
Emx1	empty spiracles homolog 1 (Drosophila)	0.061
Lepr	leptin receptor	0.059
Hoxd3	homeobox D3	0.054
Hoxa13	homeobox A13	0.053
Rnf2	ring finger protein 2	0.052
Myf5	myogenic factor 5	0.051
Prox1	prospero-related homeobox 1	0.051
Pbx3	pre B-cell leukemia transcription factor 3	0.050
Gja5	gap junction protein, alpha 5	0.047
Mesp1	mesoderm posterior 1	0.047
Notch2	Notch gene homolog 2 (Drosophila)	0.047
Efna2	ephrin A2	0.047
Hand2	heart and neural crest derivatives expressed transcript 2	0.045	Mouse
Pax8	paired box gene 8	0.045
Scn5a	sodium channel, voltage-gated, type V, alpha	0.044
Hoxa2	homeobox A2	0.044
Igf1	insulin-like growth factor 1	0.044
Lif	leukemia inhibitory factor	0.042
Fgf8	fibroblast growth factor 8	0.040
Dll4	delta-like 4 (Drosophila)	0.039
Kdm2b	lysine (K)-specific demethylase 2B	0.038
Sox2	SRY-box containing gene 2	0.037
Tlx3	T-cell leukemia, homeobox 3	0.036
Hoxa5	homeobox A5	0.035
Ror2	receptor tyrosine kinase-like orphan receptor 2	0.035
Isl1	ISL1 transcription factor, LIM/homeodomain	0.035
Ebf2	early B-cell factor 2	0.034
Rarb	retinoic acid receptor, beta	0.034	Mouse
Pax6	paired box gene 6	0.034
Hoxb4	homeobox B4	0.033
Il10	interleukin 10	0.031
Snai1	snail homolog 1 (Drosophila)	0.031
Chd7	chromodomain helicase DNA binding protein 7	0.031
T	brachyury	0.031	Mouse
Ptf1a	pancreas specific transcription factor, 1a	0.030
Neurog2	neurogenin 2	0.029	Mouse
Gata4	GATA binding protein 4	0.029
Bdnf	brain derived neurotrophic factor	0.029
Rbpj	recombination signal binding protein for immunoglobulin kappa J region	0.028
Mecom	MDS1 and EVI1 complex locus	0.028
Dlx1	distal-less homeobox 1	0.027
Lhx1	LIM homeobox protein 1	0.027
Smad6	MAD homolog 6 (Drosophila)	0.027
Dbp	D site albumin promoter binding protein	0.026
Thra	thyroid hormone receptor alpha	0.025	Mouse
Lef1	lymphoid enhancer binding factor 1	0.025
Insm1	insulinoma-associated 1	0.025
Gli3	GLI-Kruppel family member GLI3	0.024
Pou3f3	POU domain, class 3, transcription factor 3	0.024
Cbfa2t3	core-binding factor, runt domain, alpha subunit 2, translocated to, 3 (human)	0.024
Gata5	GATA binding protein 5	0.024
Hand1	heart and neural crest derivatives expressed transcript 1	0.023	Mouse
Tcf3	transcription factor 3	0.023
Sox4	SRY-box containing gene 4	0.023
Zic3	zinc finger protein of the cerebellum 3	0.022
Prdm16	PR domain containing 16	0.022
Vdr	vitamin D receptor	0.022
Ncor1	nuclear receptor co-repressor 1	0.022
Nhlh1	nescient helix loop helix 1	0.022	Mouse
Hoxa3	homeobox A3	0.022
Lhcgr	luteinizing hormone/choriogonadotropin receptor	0.021
Foxc1	forkhead box C1	0.021
Crb2	crumbs homolog 2 (Drosophila)	0.020
Shox2	short stature homeobox 2	0.020
Col13a1	collagen, type XIII, alpha 1	0.020
Dlx2	distal-less homeobox 2	0.019
Fgf10	fibroblast growth factor 10	0.019
Lhx9	LIM homeobox protein 9	0.019
Hoxb3	homeobox B3	0.019
Daxx	Fas death domain-associated protein	0.019
Gli2	GLI-Kruppel family member GLI2	0.019
Six1	sine oculis-related homeobox 1 homolog (Drosophila)	0.019
Gpr98	G protein-coupled receptor 98	0.019
Nrp1	neuropilin 1	0.018
Tbx1	T-box 1	0.018
Eya4	eyes absent 4 homolog (Drosophila)	0.018
Gnrh1	gonadotropin releasing hormone 1	0.018
Lhx5	LIM homeobox protein 5	0.018
Ece1	endothelin converting enzyme 1	0.018
Jarid2	jumonji, AT rich interactive domain 2	0.018
Bmp7	bone morphogenetic protein 7	0.017
Csf2	colony stimulating factor 2 (granulocyte-macrophage)	0.017
Trp63	transformation related protein 63	0.017
Ctrl	chymotrypsin-like	0.017
Smo	smoothened homolog (Drosophila)	0.017
Gata1	GATA binding protein 1	0.017
Prlr	prolactin receptor	0.017
Nr1h3	nuclear receptor subfamily 1, group H, member 3	0.017
Myog	myogenin	0.017
Pten	phosphatase and tensin homolog	0.017
Dlx5	distal-less homeobox 5	0.017
Smad3	MAD homolog 3 (Drosophila)	0.017
Zfp503	zinc finger protein 503	0.017
Tef	thyrotroph embryonic factor	0.017
Hoxd13	homeobox D13	0.016
Nfia	nuclear factor I/A	0.016
Gnrhr	gonadotropin releasing hormone receptor	0.016
Hdac1	histone deacetylase 1	0.016
Duox2	dual oxidase 2	0.016
Onecut1	one cut domain, family member 1	0.016
Fgfr2	fibroblast growth factor receptor 2	0.016
Fgf15	fibroblast growth factor 15	0.016
Cyp26c1	cytochrome P450, family 26, subfamily c, polypeptide 1	0.016	Mouse
Dkk1	dickkopf homolog 1 (Xenopus laevis)	0.015
Klf3	Kruppel-like factor 3 (basic)	0.015
Zfp36l1	zinc finger protein 36, C3H type-like 1	0.015
Myh7	myosin, heavy polypeptide 7, cardiac muscle, beta	0.015
Rprm	reprimo, TP53 dependent G2 arrest mediator candidate	0.015
Tcf4	transcription factor 4	0.015
Cyp19a1	cytochrome P450, family 19, subfamily a, polypeptide 1	0.015
Pkdcc	protein kinase domain containing, cytoplasmic	0.015
Ush1g	Usher syndrome 1G homolog (human)	0.015
Ptpn11	protein tyrosine phosphatase, non-receptor type 11	0.014
Pou4f3	POU domain, class 4, transcription factor 3	0.014
Hoxd1	homeobox D1	0.014
Hoxa11	homeobox A11	0.014
Zic1	zinc finger protein of the cerebellum 1	0.014
Cbl	Casitas B-lineage lymphoma	0.014
Zfp362	zinc finger protein 362	0.014
Emx2	empty spiracles homolog 2 (Drosophila)	0.014
Sall4	sal-like 4 (Drosophila)	0.014
Foxd3	forkhead box D3	0.013
Six3	sine oculis-related homeobox 3 homolog (Drosophila)	0.013
Il6	interleukin 6	0.013
Kiss1	KiSS-1 metastasis-suppressor	0.013
Bptf	bromodomain PHD finger transcription factor	0.013
Twist1	twist homolog 1 (Drosophila)	0.013	Mouse
Gdf3	growth differentiation factor 3	0.013
Arid1a	AT rich interactive domain 1A (SWI-like)	0.013
Foxf1a	forkhead box F1a	0.013
Maf1	MAF1 homolog (S. cerevisiae)	0.013
Socs1	suppressor of cytokine signaling 1	0.013
Suz12	suppressor of zeste 12 homolog (Drosophila)	0.013
Tbx4	T-box 4	0.013	Mouse
Ssbp2	single-stranded DNA binding protein 2	0.013
Rdh10	retinol dehydrogenase 10 (all-trans)	0.013
Nes	nestin	0.013
Pou5f1	POU domain, class 5, transcription factor 1	0.013
Hoxa10	homeobox A10	0.013
Zbtb12	zinc finger and BTB domain containing 12	0.013
Dnmt1	DNA methyltransferase (cytosine-5) 1	0.013
Traf4	TNF receptor associated factor 4	0.013
Scrt2	scratch homolog 2, zinc finger protein (Drosophila)	0.013
Fgfr1	fibroblast growth factor receptor 1	0.013
Tshr	thyroid stimulating hormone receptor	0.013
Bcor	BCL6 interacting corepressor	0.012
Six6	sine oculis-related homeobox 6 homolog (Drosophila)	0.012
Gpsm3	G-protein signalling modulator 3 (AGS3-like, C. elegans)	0.012
Bglap	bone gamma carboxyglutamate protein	0.012
Esr2	estrogen receptor 2 (beta)	0.012
Irx3	Iroquois related homeobox 3 (Drosophila)	0.012
Ptk7	PTK7 protein tyrosine kinase 7	0.012
Xirp1	xin actin-binding repeat containing 1	0.012
Hoxd4	homeobox D4	0.012
Wt1	Wilms tumor 1 homolog	0.012
Myo7a	myosin VIIA	0.012
Hey1	hairy/enhancer-of-split related with YRPW motif 1	0.012
Zfpm2	zinc finger protein, multitype 2	0.012
Aldh1a2	aldehyde dehydrogenase family 1, subfamily A2	0.012
Tgfb1	transforming growth factor, beta 1	0.011
Hmx3	H6 homeobox 3	0.011
Igdcc3	immunoglobulin superfamily, DCC subclass, member 3	0.011
Ncoa1	nuclear receptor coactivator 1	0.011
Tbc1d17	TBC1 domain family, member 17	0.011
Fbn2	fibrillin 2	0.011
Fst	follistatin	0.011
Cdh23	cadherin 23 (otocadherin)	0.011
Lgr5	leucine rich repeat containing G protein coupled receptor 5	0.011
Tgfbr2	transforming growth factor, beta receptor II	0.011
Nog	noggin	0.011
Hmga2	high mobility group AT-hook 2	0.011
En1	engrailed 1	0.011
Six4	sine oculis-related homeobox 4 homolog (Drosophila)	0.011
Spry2	sprouty homolog 2 (Drosophila)	0.011
Nhlh2	nescient helix loop helix 2	0.011	Mouse
Irx4	Iroquois related homeobox 4 (Drosophila)	0.011
P4hb	prolyl 4-hydroxylase, beta polypeptide	0.011
Osr1	odd-skipped related 1 (Drosophila)	0.010
Wwox	WW domain-containing oxidoreductase	0.010
Aicda	activation-induced cytidine deaminase	0.010
Myf6	myogenic factor 6	0.010
Nr2e1	nuclear receptor subfamily 2, group E, member 1	0.010
Dab1	disabled homolog 1 (Drosophila)	0.010
Stx1b	syntaxin 1B	0.010
Rbbp4	retinoblastoma binding protein 4	0.010
Chrd	chordin	0.010
Foxh1	forkhead box H1	0.010
Prph2	peripherin 2	0.010
Igfbpl1	insulin-like growth factor binding protein-like 1	0.010