IMP

Process View

Mus musculus

13 genes annotated in mouse

cranial nerve structural organization

The process that contributes to the act of creating the structural organization of the cranial nerves. This process pertains to the physical shaping of a rudimentary structure. The cranial nerves are composed of twelve pairs of nerves that emanate from the nervous tissue of the hindbrain. These nerves are sensory, motor, or mixed in nature, and provide the motor and general sensory innervation of the head, neck and viscera. They mediate vision, hearing, olfaction and taste and carry the parasympathetic innervation of the autonomic ganglia that control visceral functions.

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Known genes in the process in mouse Include functional analogs

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Gene Predictions

Click on a gene's description to view its network relationships with genes known to be involved in "cranial nerve structural organization"

Show only novel predictions Show only unknown genes Highlight genes with functional analogs involved in "cranial nerve structural organization" (in gray)

Name	Description	Probability	Func Analog Organism
Pax2	paired box gene 2	0.999
Hoxa1	homeobox A1	0.998
Ednra	endothelin receptor type A	0.965
Eya1	eyes absent 1 homolog (Drosophila)	0.915
Dlg4	discs, large homolog 4 (Drosophila)	0.915
Sema6a	sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A	0.851	Mouse
Arhgef11	Rho guanine nucleotide exchange factor (GEF) 11	0.842
Kcna2	potassium voltage-gated channel, shaker-related subfamily, member 2	0.836
Rarg	retinoic acid receptor, gamma	0.822
Ntrk2	neurotrophic tyrosine kinase, receptor, type 2	0.777
Bcl2	B-cell leukemia/lymphoma 2	0.776
Tbx1	T-box 1	0.750
Hoxb3	homeobox B3	0.743
Hoxa3	homeobox A3	0.706
Vegfa	vascular endothelial growth factor A	0.647
Fgf10	fibroblast growth factor 10	0.623
Hoxb1	homeobox B1	0.621
Fgfr2	fibroblast growth factor receptor 2	0.610
Emx2	empty spiracles homolog 2 (Drosophila)	0.602
Ret	ret proto-oncogene	0.575
Egr2	early growth response 2	0.511
Lmx1a	LIM homeobox transcription factor 1 alpha	0.507
Hoxd3	homeobox D3	0.450
Lhx1	LIM homeobox protein 1	0.429
Hoxa11	homeobox A11	0.426
Shh	sonic hedgehog	0.381
Jag1	jagged 1	0.345
Wnt9b	wingless-type MMTV integration site 9B	0.342
Rara	retinoic acid receptor, alpha	0.338
Nab2	Ngfi-A binding protein 2	0.334
Epha4	Eph receptor A4	0.306
Ar	androgen receptor	0.292
Nrp1	neuropilin 1	0.277
Erbb2	v-erb-b2 erythroblastic leukemia viral oncogene homolog 2, neuro/glioblastoma derived oncogene homolog (avian)	0.265
Hoxb2	homeobox B2	0.258
Rarb	retinoic acid receptor, beta	0.248
Hoxa2	homeobox A2	0.245	Mouse
Otx1	orthodenticle homolog 1 (Drosophila)	0.211
Gdf11	growth differentiation factor 11	0.206
Hmx3	H6 homeobox 3	0.197
Gfra2	glial cell line derived neurotrophic factor family receptor alpha 2	0.193
Pax3	paired box gene 3	0.169
Plxnd1	plexin D1	0.163	Mouse
Sdc3	syndecan 3	0.150
Dag1	dystroglycan 1	0.148
Tbx10	T-box 10	0.143
Nrp2	neuropilin 2	0.141
Fgf3	fibroblast growth factor 3	0.123
Itga3	integrin alpha 3	0.121
Rxra	retinoid X receptor alpha	0.120
Vangl2	vang-like 2 (van gogh, Drosophila)	0.119
Lhx9	LIM homeobox protein 9	0.117
Gata3	GATA binding protein 3	0.114
Ptgs2	prostaglandin-endoperoxide synthase 2	0.103
Phox2b	paired-like homeobox 2b	0.102
Kcna1	potassium voltage-gated channel, shaker-related subfamily, member 1	0.101	Mouse
Gdnf	glial cell line derived neurotrophic factor	0.096
Atp2b2	ATPase, Ca++ transporting, plasma membrane 2	0.094
Ebf3	early B-cell factor 3	0.084
Gfra3	glial cell line derived neurotrophic factor family receptor alpha 3	0.083
Msx1	homeobox, msh-like 1	0.083
Arhgef12	Rho guanine nucleotide exchange factor (GEF) 12	0.081
Nrcam	neuron-glia-CAM-related cell adhesion molecule	0.080
Kcna4	potassium voltage-gated channel, shaker-related subfamily, member 4	0.079	Mouse
Kcnb1	potassium voltage gated channel, Shab-related subfamily, member 1	0.079	Mouse
Ntrk3	neurotrophic tyrosine kinase, receptor, type 3	0.077
Gli3	GLI-Kruppel family member GLI3	0.076
Plxna1	plexin A1	0.075	Mouse
Flt1	FMS-like tyrosine kinase 1	0.072
Ntf3	neurotrophin 3	0.072
Fzd1	frizzled homolog 1 (Drosophila)	0.070
Six1	sine oculis-related homeobox 1 homolog (Drosophila)	0.070
Egr1	early growth response 1	0.065	Mouse
Fosl2	fos-like antigen 2	0.065
Clip2	CAP-GLY domain containing linker protein 2	0.063
Crim1	cysteine rich transmembrane BMP regulator 1 (chordin like)	0.062
Lama5	laminin, alpha 5	0.062
Erbb3	v-erb-b2 erythroblastic leukemia viral oncogene homolog 3 (avian)	0.061
Hr	hairless	0.060
Fscn1	fascin homolog 1, actin bundling protein (Strongylocentrotus purpuratus)	0.058
Dlx5	distal-less homeobox 5	0.058
Mgat3	mannoside acetylglucosaminyltransferase 3	0.057
Six4	sine oculis-related homeobox 4 homolog (Drosophila)	0.054
Wnt6	wingless-related MMTV integration site 6	0.053
Drd2	dopamine receptor D2	0.052
Zfpm2	zinc finger protein, multitype 2	0.051
Gbx2	gastrulation brain homeobox 2	0.050
Foxc1	forkhead box C1	0.050
Plxna4	plexin A4	0.049
Col4a3	collagen, type IV, alpha 3	0.048
Lef1	lymphoid enhancer binding factor 1	0.047
Cacng7	calcium channel, voltage-dependent, gamma subunit 7	0.046
Sox10	SRY-box containing gene 10	0.045
Lamc1	laminin, gamma 1	0.045
Sgcg	sarcoglycan, gamma (dystrophin-associated glycoprotein)	0.044
Fign	fidgetin	0.041
Fgf8	fibroblast growth factor 8	0.041
Hoxd11	homeobox D11	0.039
Junb	Jun-B oncogene	0.039
Nos3	nitric oxide synthase 3, endothelial cell	0.038
Aldh1a2	aldehyde dehydrogenase family 1, subfamily A2	0.037
Gipc1	GIPC PDZ domain containing family, member 1	0.037
Gfra1	glial cell line derived neurotrophic factor family receptor alpha 1	0.037
Hcn1	hyperpolarization-activated, cyclic nucleotide-gated K+ 1	0.037
Etl4	enhancer trap locus 4	0.036
Foxi1	forkhead box I1	0.035
Cacna2d1	calcium channel, voltage-dependent, alpha2/delta subunit 1	0.034
Tac2	tachykinin 2	0.034
Foxd2	forkhead box D2	0.034
Dkk1	dickkopf homolog 1 (Xenopus laevis)	0.033
Efnb2	ephrin B2	0.033
Mecom	MDS1 and EVI1 complex locus	0.032
Grb10	growth factor receptor bound protein 10	0.031
Lepr	leptin receptor	0.031
Fos	FBJ osteosarcoma oncogene	0.030
Grin2d	glutamate receptor, ionotropic, NMDA2D (epsilon 4)	0.029
Bcl2l11	BCL2-like 11 (apoptosis facilitator)	0.029
Tcfap2a	transcription factor AP-2, alpha	0.029
Hoxc4	homeobox C4	0.029
Cnr1	cannabinoid receptor 1 (brain)	0.028
Ror1	receptor tyrosine kinase-like orphan receptor 1	0.028
Otx2	orthodenticle homolog 2 (Drosophila)	0.028
Onecut1	one cut domain, family member 1	0.028
Pax8	paired box gene 8	0.028	Mouse
Foxg1	forkhead box G1	0.027
Mid2	midline 2	0.027
Pdgfb	platelet derived growth factor, B polypeptide	0.027
Pbx1	pre B-cell leukemia transcription factor 1	0.026
Mycn	v-myc myelocytomatosis viral related oncogene, neuroblastoma derived (avian)	0.026
Arc	activity regulated cytoskeletal-associated protein	0.026
Pou4f2	POU domain, class 4, transcription factor 2	0.026
Gnao1	guanine nucleotide binding protein, alpha O	0.026
Kcnab2	potassium voltage-gated channel, shaker-related subfamily, beta member 2	0.025
Htr1d	5-hydroxytryptamine (serotonin) receptor 1D	0.025
Slc12a5	solute carrier family 12, member 5	0.025
Lrp1	low density lipoprotein receptor-related protein 1	0.024
Prox1	prospero-related homeobox 1	0.024
Isl1	ISL1 transcription factor, LIM/homeodomain	0.024
Nr4a1	nuclear receptor subfamily 4, group A, member 1	0.024
Chd7	chromodomain helicase DNA binding protein 7	0.024
Dock4	dedicator of cytokinesis 4	0.024
Nr5a1	nuclear receptor subfamily 5, group A, member 1	0.023
Ngfr	nerve growth factor receptor (TNFR superfamily, member 16)	0.023
Rgnef	Rho-guanine nucleotide exchange factor	0.022
Plcg1	phospholipase C, gamma 1	0.022
Cdh13	cadherin 13	0.022
Tspan9	tetraspanin 9	0.022
Sim2	single-minded homolog 2 (Drosophila)	0.022
Kcnj5	potassium inwardly-rectifying channel, subfamily J, member 5	0.022
Cdh6	cadherin 6	0.021
Hbegf	heparin-binding EGF-like growth factor	0.021
Rasgrp1	RAS guanyl releasing protein 1	0.021
Ptpn14	protein tyrosine phosphatase, non-receptor type 14	0.021
Plcb1	phospholipase C, beta 1	0.021
Nfatc2	nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2	0.020
Gpr27	G protein-coupled receptor 27	0.020
Chrm4	cholinergic receptor, muscarinic 4	0.020
Epha3	Eph receptor A3	0.019
Pou3f1	POU domain, class 3, transcription factor 1	0.019
Dtna	dystrobrevin alpha	0.019
Kcna6	potassium voltage-gated channel, shaker-related, subfamily, member 6	0.019	Mouse
Ednrb	endothelin receptor type B	0.019
Pou4f3	POU domain, class 4, transcription factor 3	0.019
Npas2	neuronal PAS domain protein 2	0.019
Nab1	Ngfi-A binding protein 1	0.019
Hand1	heart and neural crest derivatives expressed transcript 1	0.018
Bmp5	bone morphogenetic protein 5	0.018
Gnaq	guanine nucleotide binding protein, alpha q polypeptide	0.018
Btbd3	BTB (POZ) domain containing 3	0.018
Nkx2-5	NK2 transcription factor related, locus 5 (Drosophila)	0.018
Gad2	glutamic acid decarboxylase 2	0.018
Plxna2	plexin A2	0.018	Mouse
Hoxb4	homeobox B4	0.018
Hoxa5	homeobox A5	0.017
Adcyap1r1	adenylate cyclase activating polypeptide 1 receptor 1	0.017
Grin2a	glutamate receptor, ionotropic, NMDA2A (epsilon 1)	0.017
Unc5c	unc-5 homolog C (C. elegans)	0.017
Tacr1	tachykinin receptor 1	0.017
Adora2a	adenosine A2a receptor	0.017
Fosb	FBJ osteosarcoma oncogene B	0.017
Nptx1	neuronal pentraxin 1	0.017
Kcnj3	potassium inwardly-rectifying channel, subfamily J, member 3	0.017
Sox7	SRY-box containing gene 7	0.017
Nhlh1	nescient helix loop helix 1	0.017
Srgap1	SLIT-ROBO Rho GTPase activating protein 1	0.017
Kalrn	kalirin, RhoGEF kinase	0.017
Mmp16	matrix metallopeptidase 16	0.016
Adam11	a disintegrin and metallopeptidase domain 11	0.016
Pcdh12	protocadherin 12	0.016
Pou3f2	POU domain, class 3, transcription factor 2	0.016
Arhgef2	rho/rac guanine nucleotide exchange factor (GEF) 2	0.016
Pou3f3	POU domain, class 3, transcription factor 3	0.016
Gpr50	G-protein-coupled receptor 50	0.015
Ids	iduronate 2-sulfatase	0.015
Kdr	kinase insert domain protein receptor	0.015
Kcnd2	potassium voltage-gated channel, Shal-related family, member 2	0.015	Mouse
Adrb1	adrenergic receptor, beta 1	0.015
Tubb4	tubulin, beta 4	0.015
Slc23a3	solute carrier family 23 (nucleobase transporters), member 3	0.015
Gjd2	gap junction protein, delta 2	0.015
Sema6d	sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D	0.015	Mouse
Syt7	synaptotagmin VII	0.015
Plxna3	plexin A3	0.015
Hapln1	hyaluronan and proteoglycan link protein 1	0.014
Cdk14	cyclin-dependent kinase 14	0.014
Hmx2	H6 homeobox 2	0.014
Dst	dystonin	0.014
Gata4	GATA binding protein 4	0.014
Atp1b2	ATPase, Na+/K+ transporting, beta 2 polypeptide	0.014
Bdnf	brain derived neurotrophic factor	0.014
Mafb	v-maf musculoaponeurotic fibrosarcoma oncogene family, protein B (avian)	0.014
Kcne1	potassium voltage-gated channel, Isk-related subfamily, member 1	0.014
Cpne6	copine VI	0.014
Btg2	B-cell translocation gene 2, anti-proliferative	0.014
Cd151	CD151 antigen	0.014
Sema5a	sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A	0.014
Kcnj11	potassium inwardly rectifying channel, subfamily J, member 11	0.014
Nrg1	neuregulin 1	0.014
Klf12	Kruppel-like factor 12	0.014
Sorbs3	sorbin and SH3 domain containing 3	0.014
Kcnq2	potassium voltage-gated channel, subfamily Q, member 2	0.014
Itm2c	integral membrane protein 2C	0.014
Sgcd	sarcoglycan, delta (dystrophin-associated glycoprotein)	0.014
Kcnma1	potassium large conductance calcium-activated channel, subfamily M, alpha member 1	0.014
Wnt4	wingless-related MMTV integration site 4	0.013
Srrm4	serine/arginine repetitive matrix 4	0.013
Vipr2	vasoactive intestinal peptide receptor 2	0.013
Tcf21	transcription factor 21	0.013
Msi1	Musashi homolog 1(Drosophila)	0.013
Zfp651	zinc finger protein 651	0.013
Erbb4	v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)	0.013
Cdk5r1	cyclin-dependent kinase 5, regulatory subunit 1 (p35)	0.013
Zfp185	zinc finger protein 185	0.013
Dcc	deleted in colorectal carcinoma	0.013
Ripply3	ripply3 homolog (zebrafish)	0.012
Trpc5	transient receptor potential cation channel, subfamily C, member 5	0.012
Gtf2ird1	general transcription factor II I repeat domain-containing 1	0.012
Efna4	ephrin A4	0.012
Tbx20	T-box 20	0.012
Fgf18	fibroblast growth factor 18	0.012
Tbx3	T-box 3	0.012
Gabra3	gamma-aminobutyric acid (GABA) A receptor, subunit alpha 3	0.012
Zic1	zinc finger protein of the cerebellum 1	0.012
Neto1	neuropilin (NRP) and tolloid (TLL)-like 1	0.012
Nes	nestin	0.012
Sstr4	somatostatin receptor 4	0.012
Zic2	zinc finger protein of the cerebellum 2	0.012
Amigo1	adhesion molecule with Ig like domain 1	0.012
Grm8	glutamate receptor, metabotropic 8	0.012
Ltbp1	latent transforming growth factor beta binding protein 1	0.012
Epas1	endothelial PAS domain protein 1	0.012
Nog	noggin	0.012
Osr1	odd-skipped related 1 (Drosophila)	0.012
Sema3c	sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C	0.012	Mouse
Prrt1	proline-rich transmembrane protein 1	0.012
Myf5	myogenic factor 5	0.012
Magi1	membrane associated guanylate kinase, WW and PDZ domain containing 1	0.012
Ece1	endothelin converting enzyme 1	0.012
Ephb2	Eph receptor B2	0.011
Adra2c	adrenergic receptor, alpha 2c	0.011
Crhr1	corticotropin releasing hormone receptor 1	0.011
Pgr	progesterone receptor	0.011
Adra1b	adrenergic receptor, alpha 1b	0.011
Wt1	Wilms tumor 1 homolog	0.011	Mouse
Hoxb6	homeobox B6	0.011
Mpz	myelin protein zero	0.011
Rgs5	regulator of G-protein signaling 5	0.011
Cntn4	contactin 4	0.011
Gria4	glutamate receptor, ionotropic, AMPA4 (alpha 4)	0.011
Pax7	paired box gene 7	0.011
Gabra1	gamma-aminobutyric acid (GABA) A receptor, subunit alpha 1	0.011
Lgr5	leucine rich repeat containing G protein coupled receptor 5	0.011
Cxadr	coxsackie virus and adenovirus receptor	0.011
Syt1	synaptotagmin I	0.011
Angpt1	angiopoietin 1	0.011
Foxc2	forkhead box C2	0.011
Cacna1g	calcium channel, voltage-dependent, T type, alpha 1G subunit	0.010
Rgs4	regulator of G-protein signaling 4	0.010
Dnajb5	DnaJ (Hsp40) homolog, subfamily B, member 5	0.010
Wnt10b	wingless related MMTV integration site 10b	0.010
Nr4a2	nuclear receptor subfamily 4, group A, member 2	0.010
Large	like-glycosyltransferase	0.010
Meox1	mesenchyme homeobox 1	0.010
Sirpa	signal-regulatory protein alpha	0.010
Bcar1	breast cancer anti-estrogen resistance 1	0.010
Smad3	MAD homolog 3 (Drosophila)	0.010
Usp13	ubiquitin specific peptidase 13 (isopeptidase T-3)	0.010
Hoxb5	homeobox B5	0.010
Pde1b	phosphodiesterase 1B, Ca2+-calmodulin dependent	0.010