IMP

Process View

Homo sapiens

1 genes annotated in human

nephron tubule formation

GO:0072079

The developmental process pertaining to the initial formation of a nephron tubule from unspecified parts. A nephron tubule is an epithelial tube that is part of the nephron, the functional part of the kidney.

Loading network...

In addition to gene-name show these genes:

Known genes in the process in human Include functional analogs

Network Filters

Minimum relationship confidence:

Maximum number of genes:

Highlight known relationships in gold.

Graphical Options

Adjust edge length:

Adjust node size:

Fixed layout

Black background

Low confidence color:

Med confidence color:

High confidence color:

Hide the legend in the network

Save Options

Gene Predictions

Click on a gene's description to view its network relationships with genes known to be involved in "nephron tubule formation"

Show only novel predictions Show only unknown genes Highlight genes with functional analogs involved in "nephron tubule formation" (in gray)

Name	Description	Probability	Func Analog Organism
NKX2-1	NK2 homeobox 1	0.755
CDH2	cadherin 2, type 1, N-cadherin (neuronal)	0.742
CDH1	cadherin 1, type 1, E-cadherin (epithelial)	0.625
TCF7L2	transcription factor 7-like 2 (T-cell specific, HMG-box)	0.575
CTNNA1	catenin (cadherin-associated protein), alpha 1, 102kDa	0.532
TCF4	transcription factor 4	0.523
APC	adenomatous polyposis coli	0.427
BTRC	beta-transducin repeat containing	0.374
GLIS2	GLIS family zinc finger 2	0.321
JUP	junction plakoglobin	0.293
HNF1A	HNF1 homeobox A	0.238
BMP7	bone morphogenetic protein 7	0.199
SIM2	single-minded homolog 2 (Drosophila)	0.184
CDC73	cell division cycle 73, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)	0.152
BMP2	bone morphogenetic protein 2	0.144
CTNND1	catenin (cadherin-associated protein), delta 1	0.124
EMD	emerin	0.096
FGF8	fibroblast growth factor 8 (androgen-induced)	0.092
FERMT2	fermitin family member 2	0.089
AXIN1	axin 1	0.088
PSEN1	presenilin 1	0.087
IRX5	iroquois homeobox 5	0.084
AR	androgen receptor	0.084
NCOA2	nuclear receptor coactivator 2	0.083
PKP4	plakophilin 4	0.075
BBS1	Bardet-Biedl syndrome 1	0.074
MDFI	MyoD family inhibitor	0.066
WNT7A	wingless-type MMTV integration site family, member 7A	0.055
EYA2	eyes absent homolog 2 (Drosophila)	0.054
FHL2	four and a half LIM domains 2	0.053
PIGK	phosphatidylinositol glycan anchor biosynthesis, class K	0.050
INHBB	inhibin, beta B	0.043
PTK7	PTK7 protein tyrosine kinase 7	0.042
HES2	hairy and enhancer of split 2 (Drosophila)	0.042
TMEM123	transmembrane protein 123	0.041
CTNNBIP1	catenin, beta interacting protein 1	0.040
GFRA3	GDNF family receptor alpha 3	0.039
FBXW11	F-box and WD repeat domain containing 11	0.039
BBS7	Bardet-Biedl syndrome 7	0.034
OVOL1	ovo-like 1(Drosophila)	0.033
FOXD1	forkhead box D1	0.033
CDH11	cadherin 11, type 2, OB-cadherin (osteoblast)	0.031
PYY	peptide YY	0.031
GSK3B	glycogen synthase kinase 3 beta	0.030
GMCL1	germ cell-less homolog 1 (Drosophila)	0.030
LEF1	lymphoid enhancer-binding factor 1	0.029
EYA1	eyes absent homolog 1 (Drosophila)	0.029
WASF1	WAS protein family, member 1	0.028
COL2A1	collagen, type II, alpha 1	0.027
HOXA11	homeobox A11	0.027
PARD3	par-3 partitioning defective 3 homolog (C. elegans)	0.026
HNF4A	hepatocyte nuclear factor 4, alpha	0.026
WT1	Wilms tumor 1	0.025
IRX1	iroquois homeobox 1	0.023	Mouse
C5orf38	chromosome 5 open reading frame 38	0.023
CDH3	cadherin 3, type 1, P-cadherin (placental)	0.022
IRX4	iroquois homeobox 4	0.022
FOXO3	forkhead box O3	0.022
GDNF	glial cell derived neurotrophic factor	0.022
SOX11	SRY (sex determining region Y)-box 11	0.022
MNX1	motor neuron and pancreas homeobox 1	0.022
GJB3	gap junction protein, beta 3, 31kDa	0.021
NR5A1	nuclear receptor subfamily 5, group A, member 1	0.021
HIC1	hypermethylated in cancer 1	0.020
LRDD	leucine-rich repeats and death domain containing	0.020
HOXB9	homeobox B9	0.020
FOXO1	forkhead box O1	0.020
FUT6	fucosyltransferase 6 (alpha (1,3) fucosyltransferase)	0.020
HOXD13	homeobox D13	0.020
SOX9	SRY (sex determining region Y)-box 9	0.019	Mouse
SIX2	SIX homeobox 2	0.019
HNF1B	HNF1 homeobox B	0.019	Mouse
SPECC1L	sperm antigen with calponin homology and coiled-coil domains 1-like	0.019
TCF7	transcription factor 7 (T-cell specific, HMG-box)	0.018
KCNT1	potassium channel, subfamily T, member 1	0.018
FOXC1	forkhead box C1	0.018
GJA3	gap junction protein, alpha 3, 46kDa	0.018
GATA6	GATA binding protein 6	0.018
FZD8	frizzled homolog 8 (Drosophila)	0.018
APLN	apelin	0.017
FOXA1	forkhead box A1	0.017
JAM2	junctional adhesion molecule 2	0.017
PITX2	paired-like homeodomain 2	0.017
SCG5	secretogranin V (7B2 protein)	0.017
ATP6V1B1	ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B1	0.017
CACNA1G	calcium channel, voltage-dependent, T type, alpha 1G subunit	0.016
BNC1	basonuclin 1	0.016
TAL1	T-cell acute lymphocytic leukemia 1	0.016
AQP2	aquaporin 2 (collecting duct)	0.016
PROX1	prospero homeobox 1	0.016
HOXC5	homeobox C5	0.015
TNIK	TRAF2 and NCK interacting kinase	0.015
HOXA13	homeobox A13	0.015
LPAR3	lysophosphatidic acid receptor 3	0.015
EVX1	even-skipped homeobox 1	0.015
BBS4	Bardet-Biedl syndrome 4	0.015
SOX8	SRY (sex determining region Y)-box 8	0.015	Mouse
PKP1	plakophilin 1 (ectodermal dysplasia/skin fragility syndrome)	0.015
CCDC85B	coiled-coil domain containing 85B	0.014
CST6	cystatin E/M	0.014
CELA2A	chymotrypsin-like elastase family, member 2A	0.014
GFRA2	GDNF family receptor alpha 2	0.014
SIX3	SIX homeobox 3	0.014
KDR	kinase insert domain receptor (a type III receptor tyrosine kinase)	0.014
CLDN11	claudin 11	0.013
SCNN1G	sodium channel, nonvoltage-gated 1, gamma	0.013
IRX2	iroquois homeobox 2	0.013	Mouse
HOXC8	homeobox C8	0.013
FOXA2	forkhead box A2	0.013
C1orf65	chromosome 1 open reading frame 65	0.013
OLIG2	oligodendrocyte lineage transcription factor 2	0.013
NKX2-3	NK2 transcription factor related, locus 3 (Drosophila)	0.013
FAT1	FAT tumor suppressor homolog 1 (Drosophila)	0.013
NMB	neuromedin B	0.013
SLC6A13	solute carrier family 6 (neurotransmitter transporter, GABA), member 13	0.013
SIX1	SIX homeobox 1	0.013	Mouse
KLF5	Kruppel-like factor 5 (intestinal)	0.013
MATR3	matrin 3	0.013
ARTN	artemin	0.012	Human
CRB3	crumbs homolog 3 (Drosophila)	0.012
OTOP2	otopetrin 2	0.012
LRP6	low density lipoprotein receptor-related protein 6	0.012
EN2	engrailed homeobox 2	0.012
NOD1	nucleotide-binding oligomerization domain containing 1	0.012
SHH	sonic hedgehog	0.012
AQP5	aquaporin 5	0.012
SPOCK1	sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 1	0.012
CDH16	cadherin 16, KSP-cadherin	0.012
HOXC9	homeobox C9	0.012
TEF	thyrotrophic embryonic factor	0.012
ZFPM1	zinc finger protein, multitype 1	0.012
KLHL35	kelch-like 35 (Drosophila)	0.012
FOXF1	forkhead box F1	0.012
TRIM9	tripartite motif containing 9	0.012
PAX6	paired box 6	0.012
EFNA2	ephrin-A2	0.012
ASAP1	ArfGAP with SH3 domain, ankyrin repeat and PH domain 1	0.012
SMAD1	SMAD family member 1	0.012
ID4	inhibitor of DNA binding 4, dominant negative helix-loop-helix protein	0.012
CYP2S1	cytochrome P450, family 2, subfamily S, polypeptide 1	0.012
GPRC5C	G protein-coupled receptor, family C, group 5, member C	0.012
ZIC2	Zic family member 2 (odd-paired homolog, Drosophila)	0.012
PAX3	paired box 3	0.011
GLCE	glucuronic acid epimerase	0.011
RAB25	RAB25, member RAS oncogene family	0.011
FBXO4	F-box protein 4	0.011
HOXB3	homeobox B3	0.011
DUSP9	dual specificity phosphatase 9	0.011
LHX2	LIM homeobox 2	0.011
MMP3	matrix metallopeptidase 3 (stromelysin 1, progelatinase)	0.011
LHX1	LIM homeobox 1	0.011
ONECUT2	one cut homeobox 2	0.011
GLI3	GLI family zinc finger 3	0.011
TBX1	T-box 1	0.011
EN1	engrailed homeobox 1	0.011
DUSP4	dual specificity phosphatase 4	0.011
PDLIM4	PDZ and LIM domain 4	0.011
FOXC2	forkhead box C2 (MFH-1, mesenchyme forkhead 1)	0.011
NDRG1	N-myc downstream regulated 1	0.011
CLDN4	claudin 4	0.011
NKX2-2	NK2 homeobox 2	0.011
GALR2	galanin receptor 2	0.011
NRTN	neurturin	0.011	Human
SLC30A3	solute carrier family 30 (zinc transporter), member 3	0.011
UGDH	UDP-glucose 6-dehydrogenase	0.011
APBA1	amyloid beta (A4) precursor protein-binding, family A, member 1	0.011
MSX1	msh homeobox 1	0.011
IHH	Indian hedgehog	0.010
SREBF2	sterol regulatory element binding transcription factor 2	0.010
TBX5	T-box 5	0.010
FGFR1	fibroblast growth factor receptor 1	0.010
IRX3	iroquois homeobox 3	0.010	Mouse
JRK	jerky homolog (mouse)	0.010
DUOX2	dual oxidase 2	0.010
HES6	hairy and enhancer of split 6 (Drosophila)	0.010
MMP1	matrix metallopeptidase 1 (interstitial collagenase)	0.010
SALL1	sal-like 1 (Drosophila)	0.010
BIK	BCL2-interacting killer (apoptosis-inducing)	0.010
FOXQ1	forkhead box Q1	0.010
WWTR1	WW domain containing transcription regulator 1	0.010
SHB	Src homology 2 domain containing adaptor protein B	0.010
ERG	v-ets erythroblastosis virus E26 oncogene homolog (avian)	0.010
FSCN2	fascin homolog 2, actin-bundling protein, retinal (Strongylocentrotus purpuratus)	0.010
SLC5A5	solute carrier family 5 (sodium iodide symporter), member 5	0.010
HS3ST3A1	heparan sulfate (glucosamine) 3-O-sulfotransferase 3A1	0.010
TFAP2C	transcription factor AP-2 gamma (activating enhancer binding protein 2 gamma)	0.010
FBXW9	F-box and WD repeat domain containing 9	0.010
NKX2-8	NK2 homeobox 8	0.010
NCOA6	nuclear receptor coactivator 6	0.010
SUMO4	SMT3 suppressor of mif two 3 homolog 4 (S. cerevisiae)	0.010
NTN3	netrin 3	0.010