IMP

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Danio rerio

15 genes annotated in zebrafish

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organic cyclic compound catabolic process

GO:1901361

The chemical reactions and pathways resulting in the breakdown of organic cyclic compound.

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Known genes in the process in zebrafish Include functional analogs

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Gene Predictions

Click on a gene's description to view its network relationships with genes known to be involved in "organic cyclic compound catabolic process"

Show only novel predictions Show only unknown genes Highlight genes with functional analogs involved in "organic cyclic compound catabolic process" (in gray)

Name	Description	Probability	Func Analog Organism
tgfb3	transforming growth factor, beta 3	0.191
bida	BH3 interacting domain death agonist	0.151
bactin2	bactin2	0.150
pafah1b1b	platelet-activating factor acetylhydrolase, isoform Ib, alpha subunit b	0.094	Mouse
myhz1.2	myosin, heavy polypeptide 1.2, skeletal muscle	0.086
tnnc1b	troponin C type 1b (slow)	0.067
rap1b	RAS related protein 1b	0.064	Human Yeast Mouse Rat Fly
actn3a	actinin alpha 3a	0.064
atp1b1b	ATPase, Na+/K+ transporting, beta 1b polypeptide	0.062
atp1b3b	ATPase, Na+/K+ transporting, beta 3b polypeptide	0.059	Human
arpc5a	actin related protein 2/3 complex, subunit 5A	0.057
dhfr	dihydrofolate reductase	0.048
sass6	spindle assembly 6 homolog (C. elegans)	0.047
tpm4	tropomyosin 4	0.047
rab1a	RAB1A, member RAS oncogene family	0.046	Human
aaas	achalasia, adrenocortical insufficiency, alacrimia	0.043
cyp2y3	cytochrome P450, family 2, subfamily Y, polypeptide 3	0.042
calb2a	calbindin 2a	0.040
aldh7a1	aldehyde dehydrogenase 7 family, member A1	0.039
cacnb1	calcium channel, voltage-dependent, beta 1 subunit	0.037
adcyap1b	adenylate cyclase activating polypeptide 1b	0.036
ache	acetylcholinesterase	0.035
nras	neuroblastoma RAS viral (v-ras) oncogene homolog	0.035	Worm Fly
calb2b	calbindin 2b, (calretinin)	0.034
hk1	hexokinase 1	0.033
eomesa	eomesodermin homolog a	0.032
eif3s10	eukaryotic translation initiation factor 3, subunit 10 (theta)	0.031
fhla	four and a half LIM domains a	0.031
ybx1	Y box binding protein 1	0.030
tnnt3b	troponin T3b, skeletal, fast	0.030	Human
pfn2	profilin 2	0.029	Human
atp1a3b	ATPase, Na+/K+ transporting, alpha 3b polypeptide	0.029	Zebrafish Worm Fly
ap2a1	adaptor-related protein complex 2, alpha 1 subunit	0.029
odc1	ornithine decarboxylase 1	0.029
dag1	dystroglycan 1	0.028
six1b	sine oculis homeobox homolog 1b	0.028
LOC570775	protein argonaute-1-like	0.028
actn1	actinin, alpha 1	0.028
tnni2a.4	troponin I, skeletal, fast 2a.4	0.028
ryr3	ryanodine receptor 3	0.027
smg5	Smg-5 homolog, nonsense mediated mRNA decay factor (C. elegans)	0.027
sumo3a	SMT3 suppressor of mif two 3 homolog 3a	0.027
hnrnpu	heterogeneous nuclear ribonucleoprotein U	0.026
LOC100149148	novel protein similar to myosin heavy chain 4 (myhc4)	0.026
rtcd1	RNA terminal phosphate cyclase domain 1	0.026
pccb	propionyl Coenzyme A carboxylase, beta polypeptide	0.026
hnrnpab	heterogeneous nuclear ribonucleoprotein A/B	0.026
srm	spermidine synthase	0.025
cdc42ep1	CDC42 effector protein (Rho GTPase binding) 1	0.025
pcna	proliferating cell nuclear antigen	0.025	Human
upf3a	UPF3 regulator of nonsense transcripts homolog A (yeast)	0.025	Worm
zgc:65894	zgc:65894	0.024
epb41l5	erythrocyte membrane protein band 4.1 like 5	0.024
gnat2	guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 2	0.024	Mouse
cyp3a65	cytochrome P450, family 3, subfamily A, polypeptide 65	0.024	Human
snx6	sorting nexin 6	0.024
lmx1b.1	LIM homeobox transcription factor 1, beta 1	0.024
mtp	microsomal triglyceride transfer protein	0.024
ssrp1a	structure specific recognition protein 1a	0.023
ndufs4	NADH dehydrogenase (ubiquinone) Fe-S protein 4, (NADH-coenzyme Q reductase)	0.023
top2a	topoisomerase (DNA) II alpha	0.023	Human Mouse Fly
api5	apoptosis inhibitor 5	0.023
pane1	proliferation associated nuclear element	0.023
eif3b	eukaryotic translation initiation factor 3, subunit B	0.023
si:ch211-254d18.3	si:ch211-254d18.3	0.023	Yeast
etf1	eukaryotic translation termination factor 1	0.023
aif1l	allograft inflammatory factor 1-like	0.022
arf5	ADP-ribosylation factor 5	0.022
upf2	UPF2 regulator of nonsense transcripts homolog (yeast)	0.022
ilk	integrin linked kinase	0.022
nedd8	neural precursor cell expressed, developmentally down-regulated 8	0.022
atp6v0ca	ATPase, H+ transporting, lysosomal, V0 subunit c, a	0.022
sept2	septin 2	0.022
mga	MAX gene associated	0.022
atp1b2a	ATPase, Na+/K+ transporting, beta 2a polypeptide	0.021
diexf	digestive organ expansion factor homolog	0.021
casz1	castor zinc finger 1	0.021
tpm1	tropomyosin 1 (alpha)	0.020
pknox1.2	pbx/knotted 1 homeobox 1.2	0.020
ppp1cc	protein phosphatase 1, catalytic subunit, gamma isoform	0.020
dlg1	discs, large (Drosophila) homolog 1	0.020
pvrl1b	poliovirus receptor-related 1b	0.020
smg1	PI-3-kinase-related kinase SMG-1	0.020	Human Worm
optc	opticin	0.019
sncgb	synuclein, gamma b (breast cancer-specific protein 1)	0.019
myhz2	myosin, heavy polypeptide 2, fast muscle specific	0.019	Fly
rab25	RAB25, member RAS oncogene family	0.019	Yeast Fly
csrp1a	cysteine and glycine-rich protein 1a	0.019
anp32b	acidic (leucine-rich) nuclear phosphoprotein 32 family, member B	0.019
atp1a1a.4	ATPase, Na+/K+ transporting, alpha 1a.4 polypeptide	0.019	Human Zebrafish Mouse Rat Worm Fly
piwil1	piwi-like 1 (Drosophila)	0.019	Fly
strap	serine/threonine kinase receptor associated protein	0.019
ppargc1al	peroxisome proliferator-activated receptor gamma, coactivator 1 alpha like	0.019
flr	fleer	0.018
gro2	groucho 2	0.018
pob	partial optokinetic response b	0.018
ahsa1l	AHA1, activator of heat shock protein ATPase homolog 1, like	0.018	Human
mstnb	myostatin b	0.018
zgc:56429	zgc:56429	0.018
ahctf1	AT hook containing transcription factor 1	0.018
lrrn1	leucine rich repeat neuronal 1	0.018
ttna	titin a	0.018
nf1a	neurofibromin 1a	0.018	Mouse Rat Fly
ppp2r1a	protein phosphatase 2 (formerly 2A), regulatory subunit A (PR 65), alpha isoform	0.017
srpr	signal recognition particle receptor (docking protein)	0.017
zgc:73142	zgc:73142	0.017
plxnb2a	plexin b2a	0.017	Mouse
scinlb	scinderin like b	0.017
rpl3	ribosomal protein L3	0.017
musk	muscle, skeletal, receptor tyrosine kinase	0.017
hspa4a	heat shock protein 4a	0.017	Yeast
zgc:77517	zgc:77517	0.017
palb2	partner and localizer of BRCA2	0.017
tgfbr2	transforming growth factor, beta receptor II	0.017
slc43a1a	solute carrier family 43, member 1a	0.017
im:7137453	im:7137453	0.017
atf4b2	activating transcription factor 4b2	0.016
sdad1	SDA1 domain containing 1	0.016
lsm7	LSM7 homolog, U6 small nuclear RNA associated (S. cerevisiae)	0.016	Yeast
smg6	Smg-6 homolog, nonsense mediated mRNA decay factor (C. elegans)	0.016
ef1a	elongation factor 1-alpha	0.016	Worm
desma	desmin a	0.016
ints7	integrator complex subunit 7	0.016
eif2c4	eukaryotic translation initiation factor 2C, 4	0.016
mybl2	myeloblastosis oncogene-like 2	0.015
kitlga	kit ligand a	0.015
copeb	core promoter element binding protein	0.015
cldn12	claudin 12	0.015
bms1l	BMS1-like, ribosome assembly protein (yeast)	0.015
eif3g	eukaryotic translation initiation factor 3, subunit G	0.015
im:7150454	im:7150454	0.015
smu1	smu-1 suppressor of mec-8 and unc-52 homolog (C. elegans)	0.015
pola2	polymerase (DNA directed), alpha 2	0.015
ahcyl1	S-adenosylhomocysteine hydrolase-like 1	0.015
h2afvl	H2A histone family, member V, like	0.015
eif4e1c	eukaryotic translation initiation factor 4E family member 1c	0.015
arnt2	aryl hydrocarbon receptor nuclear translocator 2	0.015
actr1	ARP1 actin-related protein 1, centractin (yeast)	0.015
smyhc2	slow myosin heavy chain 2	0.015	Human Mouse Rat Fly
hmgb2a	high-mobility group box 2a	0.015
znf259	zinc finger protein 259	0.015	Human
ckbb	creatine kinase, brain b	0.015
eef1b2	eukaryotic translation elongation factor 1 beta 2	0.015
cpa5	carboxypeptidase A5	0.014
msna	moesin a	0.014
cand1	cullin-associated and neddylation-dissociated 1	0.014
aldh4a1	aldehyde dehydrogenase 4 family, member A1	0.014
dus1l	dihydrouridine synthase 1-like (S. cerevisiae)	0.014
elavl1	ELAV (embryonic lethal, abnormal vision, Drosophila)-like 1 (Hu antigen R)	0.014
zgc:91910	zgc:91910	0.014
rab7	RAB7, member RAS oncogene family	0.014	Human Yeast Worm
esrrb	estrogen-related receptor beta	0.014
slc38a2	solute carrier family 38, member 2	0.014
nr5a5	nuclear receptor subfamily 5, group A, member 5	0.014
hsp90a.2	heat shock protein 90-alpha 2	0.014	Human Worm
nanos3	nanos homolog 3	0.014
trnau1apl	tRNA selenocysteine 1 associated protein 1, like	0.014
tgif1	TGFB-induced factor homeobox 1	0.014
dnaja1l	DnaJ (Hsp40) homolog, subfamily A, member 1, like	0.014	Yeast
esyt3	extended synaptotagmin-like protein 3	0.014
tm9sf3	transmembrane 9 superfamily member 3	0.014
tm9sf2	transmembrane 9 superfamily member 2	0.014
polr2d	polymerase (RNA) II (DNA directed) polypeptide D	0.014
zgc:65979	zgc:65979	0.014
arpp19b	cAMP-regulated phosphoprotein 19b	0.014
lamc1	laminin, gamma 1	0.014
acvr2a	activin receptor IIa	0.014
gdi1	GDP dissociation inhibitor 1	0.013	Yeast Rat Fly
hmgb2b	high-mobility group box 2b	0.013
ube2na	ubiquitin-conjugating enzyme E2Na	0.013	Human
setb	SET translocation (myeloid leukemia-associated) B	0.013
atp1a1a.2	ATPase, Na+/K+ transporting, alpha 1a.2 polypeptide	0.013	Human Zebrafish Mouse Rat Worm Fly
elovl1b	elongation of very long chain fatty acids (FEN1/Elo2, SUR4/Elo3, yeast)-like 1b	0.013
s100v2	S100 calcium binding protein V2	0.013
gclc	glutamate-cysteine ligase, catalytic subunit	0.013
rpn2	ribophorin II	0.013
bcl2l10	BCL2-like 10 (apoptosis facilitator)	0.013
atp6v1al	ATPase, H+ transporting, lysosomal V1 subunit A, like	0.013
yes1	v-yes-1 Yamaguchi sarcoma viral oncogene homolog 1	0.013
sncb	synuclein, beta	0.013
hsf4	heat shock transcription factor 4	0.013
bub3	BUB3 budding uninhibited by benzimidazoles 3 homolog (yeast)	0.013
mpp2b	membrane protein, palmitoylated 2b (MAGUK p55 subfamily member 2b)	0.013
eya2	eyes absent homolog 2 (Drosophila)	0.013
rfc4	replication factor C (activator 1) 4	0.013
zgc:109901	zgc:109901	0.013
rbm4.1	RNA binding motif protein 4.1	0.013
pvalb4	parvalbumin 4	0.013
tomm34	translocase of outer mitochondrial membrane 34	0.012
cltca	clathrin, heavy polypeptide a (Hc)	0.012
gna14	guanine nucleotide binding protein (G protein), alpha 14	0.012
usp5	ubiquitin specific protease 5	0.012
gnl2	guanine nucleotide binding protein-like 2 (nucleolar)	0.012
eif3d	eukaryotic translation initiation factor 3, subunit D	0.012
tmem192	transmembrane protein 192	0.012
ndufb9	NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 9	0.012
mafl	v-maf musculoaponeurotic fibrosarcoma (avian) oncogene family, protein L	0.012
atp1b1a	ATPase, Na+/K+ transporting, beta 1a polypeptide	0.012	Human Mouse
psen1	presenilin 1	0.012
rtn1a	reticulon 1a	0.012
rbm4.2	RNA binding motif protein 4.2	0.012
terfa	telomeric repeat binding factor a	0.012
rap2ip	Rap2 interacting protein	0.012
sip1	survival of motor neuron protein interacting protein 1	0.012
fbxo25	F-box protein 25	0.012
pak2a	p21 (CDKN1A)-activated kinase 2a	0.012
opn1sw1	opsin 1 (cone pigments), short-wave-sensitive 1	0.012
sbf1	SET binding factor 1	0.012	Human
zgc:66385	zgc:66385	0.012
grina	glutamate receptor, ionotropic, N-methyl D-aspartate-associated protein 1 (glutamate binding)	0.012
smg7	Smg-7 homolog, nonsense mediated mRNA decay factor (C. elegans)	0.012
ruvbl1	RuvB-like 1 (E. coli)	0.012	Yeast
s1pr2	sphingosine-1-phosphate receptor 2	0.011
celsr1a	cadherin EGF LAG seven-pass G-type receptor 1a	0.011
mpz	myelin protein zero	0.011
cnn2	calponin 2	0.011
rab13	RAB13, member RAS oncogene family	0.011	Human Yeast
rae1	RAE1 RNA export 1 homolog (S. pombe)	0.011
zgc:101661	zgc:101661	0.011
phox2a	paired-like homeobox 2a	0.011
ldhd	lactate dehydrogenase D	0.011
mycbp2	MYC binding protein 2	0.011
dclk2	doublecortin-like kinase 2	0.011
gnai2l	guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 2, like	0.011
zgc:86759	zgc:86759	0.011
zgc:112425	zgc:112425	0.011
prox1	prospero-related homeobox gene 1	0.011
mcm6	MCM6 minichromosome maintenance deficient 6, mitotin (S. cerevisiae)	0.011	Human
smyhc1	slow myosin heavy chain 1	0.011	Mouse Fly
zgc:55259	zgc:55259	0.011
rhogb	ras homolog gene family, member Gb	0.011	Human
slc34a2a	solute carrier family 34 (sodium phosphate), member 2a	0.011
rhoab	ras homolog gene family, member Ab	0.011
olfm2	olfactomedin 2	0.011
cx39.9	connexin 39.9	0.011
zeb1	zinc finger E-box binding homeobox 1	0.011
tnfrsf1a	tumor necrosis factor receptor superfamily, member 1a	0.011
wu:fb71f10	wu:fb71f10	0.011
zgc:77052	zgc:77052	0.011
lmnb1	lamin B1	0.011
zgc:100994	zgc:100994	0.011
midn	midnolin	0.011
zgc:111961	zgc:111961	0.011
zgc:64076	zgc:64076	0.011
sept9b	septin 9b	0.011
hprt1	hypoxanthine phosphoribosyltransferase 1	0.011	Human
mecp2	methyl CpG binding protein 2	0.011
tpm3	tropomyosin 3	0.011
celsr3	cadherin, EGF LAG seven-pass G-type receptor 3	0.011
msh2	mutS homolog 2 (E. coli)	0.011	Human Yeast Mouse
tbp	TATA box binding protein	0.011
snrpa	small nuclear ribonucleoprotein polypeptide A	0.011
tnni1al	troponin I, skeletal, slow like	0.011
nutf2l	nuclear transport factor 2, like	0.011
cct6a	chaperonin containing TCP1, subunit 6A (zeta 1)	0.011
cdc42l	cell division cycle 42, like	0.011	Yeast Worm Fly
zgc:113143	zgc:113143	0.011	Human
ranbp1	RAN binding protein 1	0.010
ankrd13c	ankyrin repeat domain 13C	0.010
ca2	carbonic anhydrase II	0.010
zgc:112964	zgc:112964	0.010
marcksa	myristoylated alanine rich protein kinase C substrate a	0.010
atp5a1	ATP synthase, H+ transporting, mitochondrial F1 complex, alpha subunit 1, cardiac muscle	0.010	Human Mouse
nupl1	nucleoporin like 1	0.010
chia.2	chitinase, acidic.2	0.010
dnaja2	DnaJ (Hsp40) homolog, subfamily A, member 2	0.010	Yeast
cbx5	chromobox homolog 5 (HP1 alpha homolog, Drosophila)	0.010
hnf4a	hepatocyte nuclear factor 4, alpha	0.010
wdr18	WD repeat domain 18	0.010
chaf1b	chromatin assembly factor 1, subunit B	0.010
mif	macrophage migration inhibitory factor	0.010
gngt1	guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 1	0.010
cdc7	cell division cycle 7 homolog (S. cerevisiae)	0.010
shroom4	shroom family member 4	0.010
aox3	aldehyde oxidase 3	0.010
nup43	nucleoporin 43	0.010
hn1l	hematological and neurological expressed 1-like	0.010
zgc:85866	zgc:85866	0.010
piwil2	piwi-like 2 (Drosophila)	0.010	Fly
tpd52l2b	tumor protein D52-like 2b	0.010
clstn1	calsyntenin 1	0.010
wnt5a	wingless-type MMTV integration site family, member 5a	0.010
g3bp1	GTPase activating protein (SH3 domain) binding protein 1	0.010
arpc4	actin related protein 2/3 complex, subunit 4	0.010
rpl4	ribosomal protein L4	0.010
zgc:114199	zgc:114199	0.010