IMP

Process View

Danio rerio

9 genes annotated in zebrafish

ectoderm development

The process whose specific outcome is the progression of the ectoderm over time, from its formation to the mature structure. In animal embryos, the ectoderm is the outer germ layer of the embryo, formed during gastrulation.

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In addition to gene-name show these genes:

Known genes in the process in zebrafish Include functional analogs

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Gene Predictions

Click on a gene's description to view its network relationships with genes known to be involved in "ectoderm development"

Show only novel predictions Show only unknown genes Highlight genes with functional analogs involved in "ectoderm development" (in gray)

Name	Description	Probability	Func Analog Organism
hnf1ba	HNF1 homeobox Ba	0.995
wnt1	wingless-type MMTV integration site family, member 1	0.952	Zebrafish Fly
cdh1	cadherin 1, epithelial	0.942
wnt4a	wingless-type MMTV integration site family, member 4a	0.855	Zebrafish
bmp4	bone morphogenetic protein 4	0.621
wnt2	wingless-type MMTV integration site family member 2	0.574	Zebrafish
foxa2	forkhead box A2	0.551	Mouse
wnt10a	wingless-type MMTV integration site family, member 10a	0.542	Zebrafish
wnt8b	wingless-type MMTV integration site family, member 8b	0.474	Zebrafish
wnt9a	wingless-type MMTV integration site family, member 9A	0.417	Zebrafish
cntn2	contactin 2	0.405
lmx1b.1	LIM homeobox transcription factor 1, beta 1	0.297
wnt9b	wingless-type MMTV integration site family, member 9B	0.286	Zebrafish
wnt2bb	wingless-type MMTV integration site family, member 2Bb	0.285	Zebrafish
tbx1	T-box 1	0.198
wnt11	wingless-type MMTV integration site family, member 11	0.182	Zebrafish
btg2	B-cell translocation gene 2	0.182
perp	PERP, TP53 apoptosis effector	0.181
oep	one-eyed pinhead	0.177
bmpr1aa	bone morphogenetic protein receptor, type 1aa	0.174	Mouse
wnt16	wingless-type MMTV integration site family, member 16	0.160
spry2	sprouty homolog 2	0.158
egr2b	early growth response 2b	0.156	Fly
prl	prolactin	0.154
flh	floating head	0.147
gata5	GATA-binding protein 5	0.125
id1	inhibitor of DNA binding 1	0.117
dkk1b	dickkopf 1b	0.116
tob1a	transducer of ERBB2, 1a	0.112
frzb	frizzled-related protein	0.110
irx3b	iroquois homeobox protein 3b	0.109
wls	wntless homolog (Drosophila)	0.105
grem1a	gremlin 1 homolog a, cysteine knot superfamily (Xenopus laevis)	0.105
wnt3	wingless-type MMTV integration site family, member 3	0.104	Zebrafish
map2k4a	mitogen-activated protein kinase kinase 4a	0.103
eya1	eyes absent homolog 1	0.102
epb4.1l4	erythrocyte protein band 4.1-like 4	0.101
cdh6	cadherin 6	0.097
lama5	laminin, alpha 5	0.090
lft2	lefty2	0.089
osr2	odd-skipped related 2 (Drosophila)	0.086
krt8	keratin 8	0.083
her5	hairy-related 5	0.080
mapk12	mitogen-activated protein kinase 12	0.080
dharma	dharma	0.075
egr1	early growth response 1	0.073	Fly
sox2	SRY-box containing gene 2	0.071
nkx2.2a	NK2 transcription factor related 2a	0.071
tshb	thyroid stimulating hormone, beta subunit	0.069
sfrp1b	secreted frizzled-related protein 1b	0.069
gbx1	gastrulation brain homeobox 1	0.065
tp63	tumor protein p63	0.062
wnt7aa	wingless-type MMTV integration site family, member 7Aa	0.061	Zebrafish
ndr2	nodal-related 2	0.060
dspa	desmoplakin a	0.060
wnt7bb	wingless-type MMTV integration site family, member 7Bb	0.058
og9x	OG9 homeobox gene	0.056
pomca	proopiomelanocortin a	0.056
pea3	ETS-domain transcription factor pea3	0.052
prkci	protein kinase C, iota	0.050
lef1	lymphocyte enhancer binding factor 1	0.050
nanos3	nanos homolog 3	0.050
nrarpa	notch-regulated ankyrin repeat protein a	0.049
krt4	keratin 4	0.049
rest	RE1-silencing transcription factor	0.049
foxb1.2	forkhead box B1.2	0.048
nfkbiab	nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha b	0.048
gyltl1b	glycosyltransferase-like 1b	0.047
foxa3	forkhead box A3	0.047
ccnb1	cyclin B1	0.047
gadd45ba	growth arrest and DNA-damage-inducible, beta a	0.047
dld	deltaD	0.045
bmp2b	bone morphogenetic protein 2b	0.044
arl4ab	ADP-ribosylation factor-like 4ab	0.042
sdprb	serum deprivation response b	0.040
ippk	inositol 1,3,4,5,6-pentakisphosphate 2-kinase	0.040
lsr	lipolysis stimulated lipoprotein receptor	0.038
phox2a	paired-like homeobox 2a	0.037
barhl1.2	BarH-like 1.2	0.037
buc	bucky ball	0.036
scn1bb	sodium channel, voltage-gated, type I, beta b	0.036
wnt3a	wingless-type MMTV integration site family, member 3A	0.035	Zebrafish
mll	myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila)	0.035
vasa	vasa homolog	0.035
ndr1	nodal-related 1	0.034
fzd10	frizzled homolog 10	0.034
myf5	myogenic factor 5	0.033
alas2	aminolevulinate, delta-, synthetase 2	0.033
fos	v-fos FBJ murine osteosarcoma viral oncogene homolog	0.033
jup	junction plakoglobin	0.033	Zebrafish
wif1	wnt inhibitory factor 1	0.033
map2k4b	mitogen-activated protein kinase kinase 4b	0.033
klf2a	Kruppel-like factor 2a	0.032
sema3d	semaphorin 3d	0.032
ntla	no tail a	0.032
pglyrp2	peptidoglycan recognition protein 2	0.031
lamc1	laminin, gamma 1	0.031
krt18	keratin 18	0.031
notum3	notum 3	0.031
tagln2	transgelin 2	0.031
lratb	lecithin retinol acyltransferase b (phosphatidylcholine--retinol O-acyltransferase b)	0.031
foxj1a	forkhead box J1a	0.030
lhx3	LIM homeobox 3	0.030
hmx4	H6 family homeobox 4	0.030
egr2a	early growth response 2a	0.029	Fly
spry4	sprouty (Drosophila) homolog 4	0.029
lmx1b.2	LIM homeobox transcription factor 1, beta 2	0.028
ctnnb1	catenin (cadherin-associated protein), beta 1	0.028
cdh2	cadherin 2, neuronal	0.028
atoh1a	atonal homolog 1a	0.028
acvr1b	activin A receptor, type IB	0.028
pax5	paired box gene 5	0.027
epha4a	eph receptor A4a	0.026
si:ch211-166a6.5	si:ch211-166a6.5	0.026
flot1b	flotillin 1b	0.025
si:dkey-236e20.2	si:dkey-236e20.2	0.025
cdx4	caudal type homeo box transcription factor 4	0.024
pard6gb	par-6 partitioning defective 6 homolog gamma B (C. elegans)	0.024
dag1	dystroglycan 1	0.024
atoh7	atonal homolog 7	0.023
dab1b	disabled homolog 1b (Drosophila)	0.023
fbln1	fibulin 1	0.022
admp	anti-dorsalizing morphogenic protein	0.022
wnt5b	wingless-type MMTV integration site family, member 5b	0.022	Zebrafish
krt5	keratin 5	0.022
atp1a1a.4	ATPase, Na+/K+ transporting, alpha 1a.4 polypeptide	0.021
foxd5	forkhead box D5	0.020
pax7a	paired box gene 7a	0.020
nt5c2l1	5'-nucleotidase, cytosolic II, like 1	0.020
dbx1a	developing brain homeobox 1a	0.019
tcf7l1b	transcription factor 7-like 1b (T-cell specific, HMG-box)	0.019
wnt10b	wingless-type MMTV integration site family, member 10b	0.018	Zebrafish
dlx3b	distal-less homeobox gene 3b	0.018
brd4	bromodomain containing 4	0.018
cebpb	CCAAT/enhancer binding protein (C/EBP), beta	0.018
sox3	SRY-box containing gene 3	0.018
nnr	nanor	0.018
gata2a	GATA-binding protein 2a	0.018
hnf1bb	HNF1 homeobox Bb	0.018
fgf17	fibroblast growth factor 17	0.018
shhb	sonic hedgehog b	0.017	Mouse
fgf8a	fibroblast growth factor 8 a	0.017
bmp7a	bone morphogenetic protein 7a	0.017
col8a1a	collagen, type VIII, alpha 1a	0.017
klf3	Kruppel-like factor 3 (basic)	0.017
snai1b	snail homolog 1b (Drosophila)	0.017
hoxb4a	homeo box B4a	0.016
myod1	myogenic differentiation 1	0.016
zbtb4	zinc finger and BTB domain containing 4	0.016
sim1a	single-minded homolog 1a (Drosophila)	0.016
map2k7	mitogen-activated protein kinase kinase 7	0.016
ftr82	finTRIM family, member 82	0.016
wnt4b	wingless-type MMTV integration site family, member 4b	0.016	Zebrafish
pou3f3b	POU class 3 homeobox 3b	0.016
tph1b	tryptophan hydroxylase 1b	0.016
mapk4	mitogen-activated protein kinase 4	0.016
gro2	groucho 2	0.016
lzts2a	leucine zipper, putative tumor suppressor 2a	0.015
gnb1b	guanine nucleotide binding protein (G protein), beta polypeptide 1b	0.015
osr1	odd-skipped related 1 (Drosophila)	0.015
pglyrp6	peptidoglycan recognition protein 6	0.015
plp1a	proteolipid protein 1a	0.015
nadl1.2	neural adhesion molecule L1.2	0.015
col4a6	collagen, type IV, alpha 6	0.015
per2	period homolog 2 (Drosophila)	0.015
spsb1	splA/ryanodine receptor domain and SOCS box containing 1	0.015
pdlim1	PDZ and LIM domain 1 (elfin)	0.015
slc20a1a	solute carrier family 20, member 1a	0.015
klf2b	Kruppel-like factor 2b	0.014
si:dkey-273o13.1	si:dkey-273o13.1	0.014
oprm1	opioid receptor, mu 1	0.014
sb:cb81	sb:cb81	0.014
neurod4	neurogenic differentiation 4	0.013
eng1a	engrailed 1a	0.013
olig2	oligodendrocyte lineage transcription factor 2	0.013
dkk3	dickkopf homolog 3 (Xenopus laevis)	0.013
slc4a2a	solute carrier family 4, anion exchanger, member 2a	0.013
acvr1l	activin A receptor, type I like	0.013
vent	ventral expressed homeobox	0.013
chrna4	cholinergic receptor, nicotinic, alpha 4	0.013
mapk6	mitogen-activated protein kinase 6	0.012
ism1	isthmin 1	0.012
gata3	GATA-binding protein 3	0.012
aox3	aldehyde oxidase 3	0.012
snai1a	snail homolog 1a (Drosophila)	0.012
csnk1da	casein kinase 1, delta a	0.012
rasl11b	RAS-like, family 11, member B	0.012
lhx5	LIM homeobox 5	0.011
ripk4	receptor-interacting serine-threonine kinase 4	0.011
yes1	v-yes-1 Yamaguchi sarcoma viral oncogene homolog 1	0.011
aldoaa	aldolase a, fructose-bisphosphate, a	0.011
dact2	dapper homolog 2, antagonist of beta-catenin (xenopus)	0.011
hnf4a	hepatocyte nuclear factor 4, alpha	0.011
cga	glycoprotein hormones, alpha polypeptide	0.011
stac3	SH3 and cysteine rich domain 3	0.011
epb41	erythrocyte membrane protein band 4.1 (elliptocytosis 1, RH-linked)	0.011
dlb	deltaB	0.011
vsx1	visual system homeobox 1 homolog, chx10-like	0.011
alcamb	activated leukocyte cell adhesion molecule b	0.011
LOC572344	hypothetical protein LOC572344	0.011
col2a1a	collagen type II, alpha-1a	0.011
wnt7ba	wingless-type MMTV integration site family, member 7Ba	0.011	Zebrafish
evx2	even-skipped homeobox 2	0.010
gng3	guanine nucleotide binding protein (G protein), gamma 3	0.010
fzd5	frizzled homolog 5	0.010
llgl2	lethal giant larvae homolog 2 (Drosophila)	0.010
eve1	even-skipped-like1	0.010
wnt5a	wingless-type MMTV integration site family, member 5a	0.010	Zebrafish