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Danio rerio

1 genes annotated in zebrafish

Multi-species View

organ regeneration

GO:0031100

The regrowth of a lost or destroyed organ.

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Known genes in the process in zebrafish Include functional analogs

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Gene Predictions

Click on a gene's description to view its network relationships with genes known to be involved in "organ regeneration"

Show only novel predictions Show only unknown genes Highlight genes with functional analogs involved in "organ regeneration" (in gray)

Name	Description	Probability	Func Analog Organism
cmyb	transcription factor cmyb	0.351
notch3	notch homolog 3	0.158
chaf1b	chromatin assembly factor 1, subunit B	0.074
crb2a	crumbs homolog 2a	0.063
jag1a	jagged 1a	0.063	Rat
junb	jun B proto-oncogene	0.049
egr1	early growth response 1	0.046
atf3	activating transcription factor 3	0.046
atoh7	atonal homolog 7	0.045
tert	telomerase reverse transcriptase	0.043
socs3a	suppressor of cytokine signaling 3a	0.042	Rat
copeb	core promoter element binding protein	0.040
flt4	fms-related tyrosine kinase 4	0.039
gapdhs	glyceraldehyde-3-phosphate dehydrogenase, spermatogenic	0.039
pcna	proliferating cell nuclear antigen	0.037
fli1a	friend leukemia integration 1a	0.036
flt1	fms-related tyrosine kinase 1 (vascular endothelial growth factor/vascular permeability factor receptor)	0.036
stat3	signal transduction and activation of transcription 3	0.035
zgc:153997	zgc:153997	0.033
slit3	slit (Drosophila) homolog 3	0.033
mib	mind bomb	0.031
il6st	interleukin 6 signal transducer	0.031
aldocb	aldolase C, fructose-bisphosphate, b	0.031
antxr1	anthrax toxin receptor 1	0.030
dlc	deltaC	0.029
mitfa	microphthalmia-associated transcription factor a	0.029
mcm5	MCM5 minichromosome maintenance deficient 5 (S. cerevisiae)	0.029
cahz	carbonic anhydrase	0.029
met	met proto-oncogene (hepatocyte growth factor receptor)	0.029
hlx1	H2.0-like homeo box 1 (Drosophila)	0.028
duox	dual oxidase	0.028
ahr2	aryl hydrocarbon receptor 2	0.028
col4a5	collagen, type IV, alpha 5 (Alport syndrome)	0.027
si:dkey-228g21.4	si:dkey-228g21.4	0.026
efnb2a	ephrin B2a	0.026
fabp11a	fatty acid binding protein 11a	0.026
gdf6a	growth differentiation factor 6a	0.026
tnfrsfa	tumor necrosis factor receptor superfamily, member a	0.026
scube2	signal peptide, CUB domain, EGF-like 2	0.026
urod	uroporphyrinogen decarboxylase	0.025
socs3b	suppressor of cytokine signaling 3b	0.025	Rat
lama4	laminin, alpha 4	0.024
plekhh1	pleckstrin homology domain containing, family H (with MyTH4 domain) member 1	0.024
igf2b	insulin-like growth factor 2b	0.023
dnmt8	DNA (cytosine-5-)-methyltransferase 8	0.023
zgc:171553	zgc:171553	0.023
LOC554173	abnormal spindles	0.023
dctn1a	dynactin 1a	0.022
igfbp7	insulin-like growth factor binding protein 7	0.022
prdm5	PR domain containing 5	0.022
nfe2	nuclear factor, erythroid-derived 2	0.021
aqp8a.1	aquaporin 8a, tandem duplicate 1	0.021
ephb4a	eph receptor B4a	0.021
mybl2	myeloblastosis oncogene-like 2	0.021
rad21	RAD21 homolog (S. pombe)	0.021
gas6	growth arrest-specific 6	0.020	Rat
epas1b	endothelial PAS domain protein 1b	0.020
si:rp71-39b20.7	si:rp71-39b20.7	0.020
zgc:103710	zgc:103710	0.020
pacsin3	protein kinase C and casein kinase substrate in neurons 3	0.020
zgc:100919	zgc:100919	0.020
LOC100534970	hypothetical protein LOC100534970	0.019
LOC555482	tachykinin receptor 3-like	0.019
tshz2	teashirt zinc finger homeobox 2	0.019
fosl2	fos-like antigen 2	0.019
prom1a	prominin 1a	0.019
fos	v-fos FBJ murine osteosarcoma viral oncogene homolog	0.019
tnfrsf1a	tumor necrosis factor receptor superfamily, member 1a	0.019
kdr	kinase insert domain receptor (a type III receptor tyrosine kinase)	0.019
ctsl1a	cathepsin L, 1 a	0.019
sat1a	spermidine/spermine N1-acetyltransferase 1a	0.019
lpp	LIM domain containing preferred translocation partner in lipoma	0.018
mef2a	myocyte enhancer factor 2a	0.018
slc17a7	solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 7	0.018
fgf10a	fibroblast growth factor 10a	0.018
uchl1	ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase)	0.018
si:dkey-76b14.4	si:dkey-76b14.4	0.018
igfbp1a	insulin-like growth factor binding protein 1a	0.018
efnb3b	ephrin B3b	0.018
mcm6	MCM6 minichromosome maintenance deficient 6, mitotin (S. cerevisiae)	0.018
cdipt	CDP-diacylglycerol--inositol 3-phosphatidyltransferase (phosphatidylinositol synthase)	0.018
celsr3	cadherin, EGF LAG seven-pass G-type receptor 3	0.017
gtf2h4	general transcription factor IIH, polypeptide 4	0.017
hmga1a	high mobility group AT-hook 1a	0.017
lmna	lamin A	0.017
chrm2a	cholinergic receptor, muscarinic 2a	0.017
eno1	enolase 1, (alpha)	0.017
fabp2	fatty acid binding protein 2, intestinal	0.017
slc9a8	solute carrier family 9 (sodium/hydrogen exchanger), member 8	0.017
hoxd3a	homeo box D3a	0.017
si:dkeyp-104h9.6	si:dkeyp-104h9.6	0.017
zgc:158643	zgc:158643	0.017
itga5	integrin, alpha 5 (fibronectin receptor, alpha polypeptide)	0.017
igf1ra	insulin-like growth factor 1a receptor	0.017
mcl1b	myeloid cell leukemia sequence 1b	0.017
tal1	T-cell acute lymphocytic leukemia 1	0.017
aldh1a3	aldehyde dehydrogenase 1 family, member A3	0.016
jak1	Janus kinase 1	0.016
nr1i2	nuclear receptor subfamily 1, group I, member 2	0.016
rspo1	R-spondin homolog (Xenopus laevis)	0.016
atoh1b	atonal homolog 1b	0.016
smad3b	MAD, mothers against decapentaplegic homolog 3b (Drosophila)	0.016
hgd	homogentisate 1,2-dioxygenase	0.016
myh11a	myosin, heavy polypeptide 11, smooth muscle a	0.016
mcl1a	myeloid cell leukemia sequence 1a	0.016
gsna	gelsolin a	0.016
gins2	GINS complex subunit 2	0.016
zgc:162129	zgc:162129	0.016
vsx2	visual system homeobox 2	0.016
sgk1	serum/glucocorticoid regulated kinase 1	0.016
slc17a6b	solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 6b	0.016
pomgnt1	protein O-linked mannose beta1,2-N-acetylglucosaminyltransferase	0.016
irf11	interferon regulatory factor 11	0.016
card14	caspase recruitment domain family, member 14	0.016
lepr	leptin receptor	0.016
tyms	thymidylate synthase	0.015
srp68	signal recognition particle 68	0.015
zgc:110540	zgc:110540	0.015
dnmt6	DNA (cytosine-5-)-methyltransferase 6	0.015
cyp1d1	cytochrome P450, family 1, subfamily D, polypeptide 1	0.015
smarca4	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4	0.015
slc1a3a	solute carrier family 1 (glial high affinity glutamate transporter), member 3a	0.015
notch1a	notch homolog 1a	0.015	Rat
card9	caspase recruitment domain family, member 9	0.015
rrad	Ras-related associated with diabetes	0.015
alas2	aminolevulinate, delta-, synthetase 2	0.015
bmp7b	bone morphogenetic protein 7b	0.015
ldha	lactate dehydrogenase A4	0.015
hhex	hematopoietically expressed homeobox	0.015
si:ch211-183d21.1	si:ch211-183d21.1	0.015
ptgs2a	prostaglandin-endoperoxide synthase 2a	0.015
sept9b	septin 9b	0.014
grna	granulin a	0.014
dbx1b	developing brain homeobox 1b	0.014
irx2a	iroquois homeobox protein 2, a	0.014
plcg1	phospholipase C, gamma 1	0.014
ptch1	patched 1	0.014
cyp19a1b	cytochrome P450, family 19, subfamily A, polypeptide 1b	0.014
dfna5	deafness, autosomal dominant 5	0.014
nr1h5	nuclear receptor subfamily 1, group H, member 5	0.014
timp2b	tissue inhibitor of metalloproteinase 2b	0.014
cdh2	cadherin 2, neuronal	0.014
lamc1	laminin, gamma 1	0.014
irf9	interferon regulatory factor 9	0.014
tph2	tryptophan hydroxylase 2 (tryptophan 5-monooxygenase)	0.014
pak1	p21/Cdc42/Rac1-activated kinase 1	0.014
znf536	zinc finger protein 536	0.014
si:dkey-24l11.7	si:dkey-24l11.7	0.014
rpa2	replication protein A2	0.014
LOC568379	von Willebrand factor A domain-containing protein 1-like	0.014
pdk2	pyruvate dehydrogenase kinase, isoenzyme 2	0.014
slc25a14	solute carrier family 25 (mitochondrial carrier, brain), member 14	0.014
mmp9	matrix metalloproteinase 9	0.014
scn1lab	sodium channel, voltage-gated, type I like, alpha b	0.014
lrrc6	leucine rich repeat containing 6	0.014
sat1b	spermidine/spermine N1-acetyl transferase 1b	0.014
dusp2	dual specificity phosphatase 2	0.014
si:ch211-212m21.5	si:ch211-212m21.5	0.014
pabpc1b	poly A binding protein, cytoplasmic 1 b	0.014
cln6	ceroid-lipofuscinosis, neuronal 6, late infantile, variant	0.014
ednra	endothelin receptor type A	0.014
ldb2a	LIM-domain binding factor 2a	0.014
cdc16	cell division cycle 16 homolog (S. cerevisiae)	0.014
cdk1	cyclin-dependent kinase 1	0.013
grem2	gremlin 2, cysteine knot superfamily	0.013
fgfr3	fibroblast growth factor receptor 3	0.013
slit2	slit (Drosophila) homolog 2	0.013
tnfsf10l	tumor necrosis factor (ligand) superfamily, member 10 like	0.013
slc2a10	solute carrier family 2 (facilitated glucose transporter), member 10	0.013
foxe1	forkhead box E1 (thyroid transcription factor 2)	0.013
prim1	primase polypeptide 1	0.013
rbb4	retinoblastoma binding protein 4	0.013
kcnh2	potassium voltage-gated channel, subfamily H (eag-related), member 2	0.013
ucp1	uncoupling protein 1	0.013
barhl1.2	BarH-like 1.2	0.013
cenph	centromere protein H	0.013
zgc:103467	myosin, light chain 9, regulatory	0.013
ddb2	damage-specific DNA binding protein 2	0.013
gyltl1b	glycosyltransferase-like 1b	0.013
phlda1	pleckstrin homology-like domain, family A, member 1	0.013
jag2	jagged 2	0.013
grn1	granulin 1	0.013
kiss1	KiSS-1 metastasis-suppressor	0.013
chst11	carbohydrate (chondroitin 4) sulfotransferase 11	0.013
kal1b	Kallmann syndrome 1b sequence	0.013
vim	vimentin	0.013
f5	coagulation factor V	0.013
pax6b	paired box gene 6b	0.013
nr2f5	nuclear receptor subfamily 2, group F, member 5	0.013
fhl	four and a half LIM domains	0.013
gfap	glial fibrillary acidic protein	0.013
adrb1	adrenergic receptor, beta 1	0.013
meis2.2	myeloid ecotropic viral integration site 2.2	0.013
gpia	glucose phosphate isomerase a	0.013
tagln	transgelin	0.013
adrb2a	adrenergic receptor, beta 2a	0.013
cxc46	CXC chemokine 46	0.013
m17	IL-6 subfamily cytokine M17	0.013
bmp3	bone morphogenetic protein 3	0.013
nkx6.1	NK6 transcription factor related, locus 1 (Drosophila)	0.013
angpt2	angiopoietin 2	0.013
zeb2a	zinc finger E-box binding homeobox 2a	0.012
bcl2l1	bcl2-like 1	0.012
igfbp3	insulin-like growth factor binding protein 3	0.012
olig4	oligodendrocyte transcription factor 4	0.012
dtng	dystrobrevin, gamma and dystrobrevin, gamma-like	0.012
itgb3b	integrin beta 3b	0.012
plekhg5a	pleckstrin homology domain containing, family G (with RhoGef domain) member 5a	0.012
dusp5	dual specificity phosphatase 5	0.012
gna12	guanine nucleotide binding protein (G protein) alpha 12	0.012
c1qc	complement component 1, q subcomponent, C chain	0.012
nlgn2b	neuroligin 2b	0.012
proc	protein C (inactivator of coagulation factors Va and VIIIa)	0.012
bcl2	B-cell leukemia/lymphoma 2	0.012
vps39	vacuolar protein sorting 39 homolog (S. cerevisiae)	0.012
rfc5	replication factor C (activator 1) 5	0.012
nog2	noggin 2	0.012
mcm3	MCM3 minichromosome maintenance deficient 3 (S. cerevisiae)	0.012
pkm2a	pyruvate kinase, muscle, a	0.012	Rat
ptprk	protein tyrosine phosphatase, receptor type, K	0.012
ucp3	uncoupling protein 3	0.012
lama2	laminin, alpha 2	0.012
entpd1	ectonucleoside triphosphate diphosphohydrolase 1	0.012
large	like-glycosyltransferase	0.012
meis4.1a	myeloid ecotropic viral integration site 4.1a	0.012
tmprss4a	transmembrane protease, serine 4a	0.012
stat1b	signal transducer and activator of transcription 1b	0.012
crabp2b	cellular retinoic acid binding protein 2, b	0.012
rab20	RAB20, member RAS oncogene family	0.012
uevld	UEV and lactate/malate dehyrogenase domains	0.012
serpinf2	serine (or cysteine) peptidase inhibitor, clade F, member 2	0.012
vwf	von Willebrand factor	0.012
dcc	deleted in colorectal carcinoma	0.012
loxl2a	lysyl oxidase-like 2a	0.012
scd	stearoyl-CoA desaturase (delta-9-desaturase)	0.012
dzip1	DAZ interacting protein 1	0.011
furinb	furin (paired basic amino acid cleaving enzyme) b	0.011
msh2	mutS homolog 2 (E. coli)	0.011
gata6	GATA-binding protein 6	0.011
sptlc2	serine palmitoyltransferase, long chain base subunit 2	0.011
zgc:111821	zgc:111821	0.011
mtp	microsomal triglyceride transfer protein	0.011
vegfaa	vascular endothelial growth factor Aa	0.011
pgk1	phosphoglycerate kinase 1	0.011
hat1	histone acetyltransferase 1	0.011
zgc:92648	zgc:92648	0.011
cdh15	cadherin 15, M-cadherin (myotubule)	0.011
rock2a	rho-associated, coiled-coil containing protein kinase 2a	0.011
dhdhl	dihydrodiol dehydrogenase (dimeric), like	0.011
cd74	CD74 molecule, major histocompatibility complex, class II invariant chain	0.011
ikzf1	IKAROS family zinc finger 1 (Ikaros)	0.011
dntt	deoxynucleotidyltransferase, terminal	0.011
fshb	follicle stimulating hormone, beta polypeptide	0.011
zgc:63663	zgc:63663	0.011
bmp1a	bone morphogenetic protein 1a	0.011
mical3	flavoprotein oxidoreductase MICAL3	0.011
scn4bb	sodium channel, voltage-gated, type IV, beta b	0.011
ptgs1	prostaglandin-endoperoxide synthase 1	0.011
sb:eu2485	sb:eu2485	0.011
pabpc1a	poly A binding protein, cytoplasmic 1 a	0.011
cdc25	cell division cycle 25 homolog	0.011
zgc:92851	zgc:92851	0.011
LOC567452	G protein-coupled receptor kinase 5-like	0.011
mxa	myxovirus (influenza) resistance A	0.011
myod1	myogenic differentiation 1	0.011
slc12a2	solute carrier family 12 (potassium/chloride transporters), member 2	0.011
zgc:112992	zgc:112992	0.011
zgc:63691	zgc:63691	0.011
ass1	argininosuccinate synthetase 1	0.011
wu:fb12e11	wu:fb12e11	0.011
hoxb4a	homeo box B4a	0.011
LOC100332237	thrombospondin-1-like	0.011
si:dkeyp-68f6.1	si:dkeyp-68f6.1	0.011
jun	jun proto-oncogene	0.011
fzd7b	frizzled homolog 7b	0.011
LOC100003330	melanocortin-2 receptor accessory protein 2-like	0.011
sh3gl1b	SH3-domain GRB2-like 1b	0.011
vasp	vasodilator-stimulated phosphoprotein	0.011
cebpd	CCAAT/enhancer binding protein (C/EBP), delta	0.011
nar	no arches	0.011
dll4	delta-like 4 (Drosophila)	0.011
aldh2b	aldehyde dehydrogenase 2b	0.011
mmgt1	membrane magnesium transporter 1	0.011
rgs2	regulator of G-protein signaling 2	0.011
slc25a27	solute carrier family 25, member 27	0.011
zgc:56272	zgc:56272	0.011
irak4	interleukin-1 receptor-associated kinase 4	0.011
aldh2a	aldehyde dehydrogenase 2 family (mitochondrial)a	0.011
zgc:112421	zgc:112421	0.011
esama	endothelial cell adhesion molecule a	0.011
jam3b	junctional adhesion molecule 3b	0.011
tes	testis derived transcript (3 LIM domains)	0.011
gdnf	glial cell derived neurotrophic factor	0.011
plxna3	plexin A3	0.011
ldb1a	LIM-domain binding factor 1a	0.011
snapc4	small nuclear RNA activating complex, polypeptide 4	0.011
mdka	midkine-related growth factor	0.011
junbl	jun B proto-oncogene, like	0.011
zgc:112018	zgc:112018	0.010
ctcf	CCCTC-binding factor (zinc finger protein)	0.010
calm1a	calmodulin 1a	0.010
nod2	nucleotide-binding oligomerization domain containing 2	0.010
lrp2	low density lipoprotein-related protein 2	0.010
sf3a3	splicing factor 3a, subunit 3	0.010
cadm2a	cell adhesion molecule 2a	0.010
cnr1	cannabinoid receptor 1	0.010
chrna6	cholinergic receptor, nicotinic, alpha 6	0.010
tie1	endothelium-specific receptor tyrosine kinase 1	0.010
ptk2.1	protein tyrosine kinase 2a	0.010
casz1	castor zinc finger 1	0.010
nr0b1	nuclear receptor subfamily 0, group B, member 1	0.010
zgc:56326	zgc:56326	0.010
derl1	Der1-like domain family, member 1	0.010
klf11b	Kruppel-like factor 11b	0.010
rnasel1	ribonuclease like 1	0.010
adh5	alcohol dehydrogenase 5	0.010
nlgn4b	neuroligin 4b	0.010
mmp14a	matrix metalloproteinase 14a (membrane-inserted)	0.010
rassf1	Ras association (RalGDS/AF-6) domain family 1	0.010
ms4a17a.11	membrane-spanning 4-domains, subfamily A, member 17A.11	0.010
zgc:85866	zgc:85866	0.010
masp2	mannan-binding lectin serine peptidase 2	0.010
si:dkey-205h13.2	si:dkey-205h13.2	0.010
adipor1a	adiponectin receptor 1a	0.010