IMP

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Homo sapiens

1 genes annotated in human

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rostrocaudal neural tube patterning

GO:0021903

The process in which the neural tube is divided into specific regions along the rostrocaudal axis.

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Known genes in the process in human Include functional analogs

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Gene Predictions

Click on a gene's description to view its network relationships with genes known to be involved in "rostrocaudal neural tube patterning"

Show only novel predictions Show only unknown genes Highlight genes with functional analogs involved in "rostrocaudal neural tube patterning" (in gray)

Name	Description	Probability	Func Analog Organism
HDAC2	histone deacetylase 2	1.000
EED	embryonic ectoderm development	0.958
SIN3A	SIN3 homolog A, transcription regulator (yeast)	0.957
BCOR	BCL6 corepressor	0.956
SUZ12	suppressor of zeste 12 homolog (Drosophila)	0.951
USP7	ubiquitin specific peptidase 7 (herpes virus-associated)	0.851
DNMT1	DNA (cytosine-5-)-methyltransferase 1	0.833
RBBP4	retinoblastoma binding protein 4	0.797
MTA3	metastasis associated 1 family, member 3	0.776
NR4A1	nuclear receptor subfamily 4, group A, member 1	0.538
EZH2	enhancer of zeste homolog 2 (Drosophila)	0.505
DKK1	dickkopf homolog 1 (Xenopus laevis)	0.484
DHX30	DEAH (Asp-Glu-Ala-His) box polypeptide 30	0.467
SIRT1	sirtuin 1	0.430
RNF2	ring finger protein 2	0.428
RBBP7	retinoblastoma binding protein 7	0.401
CYFIP1	cytoplasmic FMR1 interacting protein 1	0.321
NR2E3	nuclear receptor subfamily 2, group E, member 3	0.316
CYFIP2	cytoplasmic FMR1 interacting protein 2	0.298
DNMT3B	DNA (cytosine-5-)-methyltransferase 3 beta	0.268
YY1	YY1 transcription factor	0.183
WNT3A	wingless-type MMTV integration site family, member 3A	0.144	Zebrafish
PTEN	phosphatase and tensin homolog	0.125
CBX8	chromobox homolog 8	0.106
AXIN1	axin 1	0.103
CDK9	cyclin-dependent kinase 9	0.088
CHD4	chromodomain helicase DNA binding protein 4	0.086
FZD8	frizzled homolog 8 (Drosophila)	0.085
HDAC3	histone deacetylase 3	0.078
AMMECR1	Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis chromosomal region gene 1	0.073
RAX	retina and anterior neural fold homeobox	0.069
LRP6	low density lipoprotein receptor-related protein 6	0.069	Mouse
BMI1	BMI1 polycomb ring finger oncogene	0.066	Mouse
FZD1	frizzled homolog 1 (Drosophila)	0.066
APPL1	adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 1	0.066
PCGF2	polycomb group ring finger 2	0.066
FGF3	fibroblast growth factor 3	0.062
CTCF	CCCTC-binding factor (zinc finger protein)	0.061
CBX6	chromobox homolog 6	0.060
IPO13	importin 13	0.058
RBPMS	RNA binding protein with multiple splicing	0.055
FOXA2	forkhead box A2	0.050
GRHL3	grainyhead-like 3 (Drosophila)	0.048
MAGI3	membrane associated guanylate kinase, WW and PDZ domain containing 3	0.047
MBD3	methyl-CpG binding domain protein 3	0.047
MTA2	metastasis associated 1 family, member 2	0.041
SIX3	SIX homeobox 3	0.040
SAP30	Sin3A-associated protein, 30kDa	0.039
LBX1	ladybird homeobox 1	0.036
LHX2	LIM homeobox 2	0.034
SOX1	SRY (sex determining region Y)-box 1	0.033
CTNNB1	catenin (cadherin-associated protein), beta 1, 88kDa	0.033
CAV1	caveolin 1, caveolae protein, 22kDa	0.032
HOXC8	homeobox C8	0.032
NUDT3	nudix (nucleoside diphosphate linked moiety X)-type motif 3	0.032
CSNK1E	casein kinase 1, epsilon	0.031
RCOR1	REST corepressor 1	0.031
C5orf54	chromosome 5 open reading frame 54	0.030
FOXL1	forkhead box L1	0.030
BCL11B	B-cell CLL/lymphoma 11B (zinc finger protein)	0.030
KRTAP4-12	keratin associated protein 4-12	0.029
PCGF1	polycomb group ring finger 1	0.029
TP53	tumor protein p53	0.029
STAU1	staufen, RNA binding protein, homolog 1 (Drosophila)	0.028
MTA1	metastasis associated 1	0.028
ZNF331	zinc finger protein 331	0.028
SP3	Sp3 transcription factor	0.027
EIF2AK2	eukaryotic translation initiation factor 2-alpha kinase 2	0.027
RING1	ring finger protein 1	0.026
CBX4	chromobox homolog 4	0.026
ZMYND8	zinc finger, MYND-type containing 8	0.025
NPTN	neuroplastin	0.025
GSK3B	glycogen synthase kinase 3 beta	0.025
ZFPM1	zinc finger protein, multitype 1	0.024
WNT3	wingless-type MMTV integration site family, member 3	0.024
GATAD2A	GATA zinc finger domain containing 2A	0.023
SETD7	SET domain containing (lysine methyltransferase) 7	0.023
UHRF2	ubiquitin-like with PHD and ring finger domains 2	0.023
ZIC1	Zic family member 1 (odd-paired homolog, Drosophila)	0.022
PRKAA1	protein kinase, AMP-activated, alpha 1 catalytic subunit	0.022
ACACA	acetyl-CoA carboxylase alpha	0.021
TLX3	T-cell leukemia homeobox 3	0.021
FXYD3	FXYD domain containing ion transport regulator 3	0.021
HRH3	histamine receptor H3	0.020
RB1CC1	RB1-inducible coiled-coil 1	0.020
MSX1	msh homeobox 1	0.020
FOXD3	forkhead box D3	0.020
IRX4	iroquois homeobox 4	0.019
TLE2	transducin-like enhancer of split 2 (E(sp1) homolog, Drosophila)	0.019
TMEM9B	TMEM9 domain family, member B	0.019
POU4F3	POU class 4 homeobox 3	0.019
MBD2	methyl-CpG binding domain protein 2	0.019
LHX1	LIM homeobox 1	0.018
SNAI1	snail homolog 1 (Drosophila)	0.018
TFAP2A	transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha)	0.018
FOXB1	forkhead box B1	0.018
ALX4	ALX homeobox 4	0.018
XRCC1	X-ray repair complementing defective repair in Chinese hamster cells 1	0.017
SLC9A3R1	solute carrier family 9 (sodium/hydrogen exchanger), member 3 regulator 1	0.017
KIAA0182	KIAA0182	0.017
SAP130	Sin3A-associated protein, 130kDa	0.017
INHBB	inhibin, beta B	0.017
HCFC1	host cell factor C1 (VP16-accessory protein)	0.017
HEMGN	hemogen	0.017
CBX7	chromobox homolog 7	0.017
PRKACA	protein kinase, cAMP-dependent, catalytic, alpha	0.017
PWWP2A	PWWP domain containing 2A	0.017
HMGCL	3-hydroxymethyl-3-methylglutaryl-CoA lyase	0.017
FAM110A	family with sequence similarity 110, member A	0.017
EN1	engrailed homeobox 1	0.017	Mouse
GLB1	galactosidase, beta 1	0.017
ADAMTS18	ADAM metallopeptidase with thrombospondin type 1 motif, 18	0.016
GBX2	gastrulation brain homeobox 2	0.016	Mouse
RBFOX2	RNA binding protein, fox-1 homolog (C. elegans) 2	0.016
CHD3	chromodomain helicase DNA binding protein 3	0.016
DNMT3A	DNA (cytosine-5-)-methyltransferase 3 alpha	0.016
FOXC1	forkhead box C1	0.016
RPN2	ribophorin II	0.016
CCDC140	coiled-coil domain containing 140	0.016
MCC	mutated in colorectal cancers	0.016
UBP1	upstream binding protein 1 (LBP-1a)	0.016
TRADD	TNFRSF1A-associated via death domain	0.016
USP42	ubiquitin specific peptidase 42	0.016
FGF8	fibroblast growth factor 8 (androgen-induced)	0.015
GSC	goosecoid homeobox	0.015
CDX2	caudal type homeobox 2	0.015
OLIG3	oligodendrocyte transcription factor 3	0.015
SOCS2	suppressor of cytokine signaling 2	0.015
SOX2	SRY (sex determining region Y)-box 2	0.015
TP73	tumor protein p73	0.015
GTF3C1	general transcription factor IIIC, polypeptide 1, alpha 220kDa	0.015
HOXB1	homeobox B1	0.015
TLE1	transducin-like enhancer of split 1 (E(sp1) homolog, Drosophila)	0.014
DLX5	distal-less homeobox 5	0.014
HOXB8	homeobox B8	0.014
CSNK2B	casein kinase 2, beta polypeptide	0.014
TTYH1	tweety homolog 1 (Drosophila)	0.014
FBXO11	F-box protein 11	0.014
GATAD2B	GATA zinc finger domain containing 2B	0.014
SOX14	SRY (sex determining region Y)-box 14	0.014
ING2	inhibitor of growth family, member 2	0.014
ESPN	espin	0.014
HOXB9	homeobox B9	0.014
MNX1	motor neuron and pancreas homeobox 1	0.014
NKX2-5	NK2 transcription factor related, locus 5 (Drosophila)	0.014
PRDM12	PR domain containing 12	0.014
PHC1	polyhomeotic homolog 1 (Drosophila)	0.014
DAB2	disabled homolog 2, mitogen-responsive phosphoprotein (Drosophila)	0.014
KCNK13	potassium channel, subfamily K, member 13	0.014
FAM110C	family with sequence similarity 110, member C	0.014
FZD2	frizzled homolog 2 (Drosophila)	0.014
PAX6	paired box 6	0.013	Mouse
NKX2-2	NK2 homeobox 2	0.013
FRK	fyn-related kinase	0.013
PITX1	paired-like homeodomain 1	0.013
SFRP1	secreted frizzled-related protein 1	0.013
E2F2	E2F transcription factor 2	0.013
SIM2	single-minded homolog 2 (Drosophila)	0.013
SOX18	SRY (sex determining region Y)-box 18	0.013
MEX3C	mex-3 homolog C (C. elegans)	0.013
OTP	orthopedia homeobox	0.013
UBE2I	ubiquitin-conjugating enzyme E2I (UBC9 homolog, yeast)	0.013
FOXF1	forkhead box F1	0.013
SMARCE1	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1	0.013
HOXD12	homeobox D12	0.013
SLTM	SAFB-like, transcription modulator	0.013
NRG2	neuregulin 2	0.013
SEMA3G	sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3G	0.013
FBXO34	F-box protein 34	0.012
ZC3H10	zinc finger CCCH-type containing 10	0.012
SMC1A	structural maintenance of chromosomes 1A	0.012
CNNM3	cyclin M3	0.012
FZD10	frizzled homolog 10 (Drosophila)	0.012
YBX2	Y box binding protein 2	0.012
PAX2	paired box 2	0.012
APLN	apelin	0.012
SIX1	SIX homeobox 1	0.012
TOP2B	topoisomerase (DNA) II beta 180kDa	0.012
MEN1	multiple endocrine neoplasia I	0.012
VSX2	visual system homeobox 2	0.012
HOXB13	homeobox B13	0.012
PDX1	pancreatic and duodenal homeobox 1	0.012
FGF4	fibroblast growth factor 4	0.012
EYA2	eyes absent homolog 2 (Drosophila)	0.012
CALCA	calcitonin-related polypeptide alpha	0.012
MYST1	MYST histone acetyltransferase 1	0.012
CDK2AP1	cyclin-dependent kinase 2 associated protein 1	0.012
SIX2	SIX homeobox 2	0.012
BMX	BMX non-receptor tyrosine kinase	0.012
DPYSL5	dihydropyrimidinase-like 5	0.011
RAMP2	receptor (G protein-coupled) activity modifying protein 2	0.011
NKX6-1	NK6 homeobox 1	0.011
ESRP1	epithelial splicing regulatory protein 1	0.011
TBX1	T-box 1	0.011
HOXC12	homeobox C12	0.011
KHSRP	KH-type splicing regulatory protein	0.011
NEUROG1	neurogenin 1	0.011
UTF1	undifferentiated embryonic cell transcription factor 1	0.011
HIVEP1	human immunodeficiency virus type I enhancer binding protein 1	0.011
TRIM27	tripartite motif containing 27	0.011
IFNB1	interferon, beta 1, fibroblast	0.011
PHF12	PHD finger protein 12	0.011
HOXC13	homeobox C13	0.011
NKX3-2	NK3 homeobox 2	0.011
CCND1	cyclin D1	0.011
BHLHE23	basic helix-loop-helix family, member e23	0.011
ANAPC4	anaphase promoting complex subunit 4	0.011
ID1	inhibitor of DNA binding 1, dominant negative helix-loop-helix protein	0.011
OBSL1	obscurin-like 1	0.011
ZNF207	zinc finger protein 207	0.011
STRBP	spermatid perinuclear RNA binding protein	0.011
STAT3	signal transducer and activator of transcription 3 (acute-phase response factor)	0.011
PTK2	PTK2 protein tyrosine kinase 2	0.011
IGF2BP1	insulin-like growth factor 2 mRNA binding protein 1	0.011
NCAPD2	non-SMC condensin I complex, subunit D2	0.011
FOXD1	forkhead box D1	0.011
FOXC2	forkhead box C2 (MFH-1, mesenchyme forkhead 1)	0.011
BARHL1	BarH-like homeobox 1	0.011
KLF14	Kruppel-like factor 14	0.011
ESRP2	epithelial splicing regulatory protein 2	0.011
HIPK4	homeodomain interacting protein kinase 4	0.011
CDH3	cadherin 3, type 1, P-cadherin (placental)	0.010
TBX5	T-box 5	0.010
ROR2	receptor tyrosine kinase-like orphan receptor 2	0.010
NTN1	netrin 1	0.010
MAPK4	mitogen-activated protein kinase 4	0.010
FAM46A	family with sequence similarity 46, member A	0.010
CYP26A1	cytochrome P450, family 26, subfamily A, polypeptide 1	0.010
FHL1	four and a half LIM domains 1	0.010
OVOL1	ovo-like 1(Drosophila)	0.010
GABBR2	gamma-aminobutyric acid (GABA) B receptor, 2	0.010
LHX4	LIM homeobox 4	0.010
FEZF2	FEZ family zinc finger 2	0.010
RYBP	RING1 and YY1 binding protein	0.010
NKX2-3	NK2 transcription factor related, locus 3 (Drosophila)	0.010
SEP15	15 kDa selenoprotein	0.010
E4F1	E4F transcription factor 1	0.010
PDS5B	PDS5, regulator of cohesion maintenance, homolog B (S. cerevisiae)	0.010
SUDS3	suppressor of defective silencing 3 homolog (S. cerevisiae)	0.010
GSX2	GS homeobox 2	0.010
PHF6	PHD finger protein 6	0.010
NIN	ninein (GSK3B interacting protein)	0.010
HOXA1	homeobox A1	0.010