The network for 'retina morphogenesis in camera type eye' in your query organism is displayed on the left, if relationships are supported by the integrated data. Moving any of the genes in that network will simultaneously update the homologs in the networks displayed to the right (if they exist). Additionally, hovering over any nodes will highlight the identified functionally similar homologs in the other networks. Last, the bar above the networks allows you to remove/add additional organisms. Simily drag and drop the organism names in the desired order.

Multiple Organisms

retina morphogenesis in camera type eye

The process in which the anatomical structure of the retina is generated and organized.

Mus musculus
Name Description Probability Func Analog Organism
Shh sonic hedgehog 1.000
Pax6 paired box gene 6 1.000
Gli3 GLI-Kruppel family member GLI3 0.999
Otx2 orthodenticle homolog 2 (Drosophila) 0.999
Fgfr2 fibroblast growth factor receptor 2 0.998
Sox2 SRY-box containing gene 2 0.996
Tbx3 T-box 3 0.981
Pbx1 pre B-cell leukemia transcription factor 1 0.971
Vegfa vascular endothelial growth factor A 0.966
Tcfap2a transcription factor AP-2, alpha 0.963
Ptf1a pancreas specific transcription factor, 1a 0.947
Isl1 ISL1 transcription factor, LIM/homeodomain 0.946
Pitx2 paired-like homeodomain transcription factor 2 0.930
Pax2 paired box gene 2 0.920
Rho rhodopsin 0.910
Pkd1 polycystic kidney disease 1 homolog 0.902
Lhx3 LIM homeobox protein 3 0.898
Atoh7 atonal homolog 7 (Drosophila) 0.897
Neurod1 neurogenic differentiation 1 0.896
Fgf8 fibroblast growth factor 8 0.863
Pax3 paired box gene 3 0.860
Dcx doublecortin 0.855
Foxc1 forkhead box C1 0.843
Pten phosphatase and tensin homolog 0.832
Lmx1a LIM homeobox transcription factor 1 alpha 0.822
Hand2 heart and neural crest derivatives expressed transcript 2 0.796
Tbx5 T-box 5 0.781
Sox11 SRY-box containing gene 11 0.776
Neurog2 neurogenin 2 0.763
Gdnf glial cell line derived neurotrophic factor 0.748
Pard3 par-3 (partitioning defective 3) homolog (C. elegans) 0.747
Foxg1 forkhead box G1 0.736
Foxc2 forkhead box C2 0.733
Hoxa13 homeobox A13 0.732
Hoxd13 homeobox D13 0.730
Sema3f sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3F 0.727
Igdcc3 immunoglobulin superfamily, DCC subclass, member 3 0.725
Il6st interleukin 6 signal transducer 0.717
Runx2 runt related transcription factor 2 0.717
Nkx2-5 NK2 transcription factor related, locus 5 (Drosophila) 0.713
Gbx2 gastrulation brain homeobox 2 0.702
Pitx1 paired-like homeodomain transcription factor 1 0.679
Ascl1 achaete-scute complex homolog 1 (Drosophila) 0.659
Foxa2 forkhead box A2 0.655
Msx2 homeobox, msh-like 2 0.652
Ctnnb1 catenin (cadherin associated protein), beta 1 0.644
Col2a1 collagen, type II, alpha 1 0.643
Fgfr1 fibroblast growth factor receptor 1 0.636
Neurod4 neurogenic differentiation 4 0.591
Sox9 SRY-box containing gene 9 0.585
Pou4f2 POU domain, class 4, transcription factor 2 0.566
Plxnd1 plexin D1 0.566
Bmp4 bone morphogenetic protein 4 0.563
Prph2 peripherin 2 0.561
Irx5 Iroquois related homeobox 5 (Drosophila) 0.558
Crb2 crumbs homolog 2 (Drosophila) 0.555
Nr5a1 nuclear receptor subfamily 5, group A, member 1 0.551
Ptpn11 protein tyrosine phosphatase, non-receptor type 11 0.542
Itgb1 integrin beta 1 (fibronectin receptor beta) 0.541
Uncx UNC homeobox 0.530
Kl klotho 0.529
Msx1 homeobox, msh-like 1 0.523
Pax8 paired box gene 8 0.515
Emx2 empty spiracles homolog 2 (Drosophila) 0.514
Nr2e1 nuclear receptor subfamily 2, group E, member 1 0.512
Twist2 twist homolog 2 (Drosophila) 0.503
Unc5c unc-5 homolog C (C. elegans) 0.490
Six1 sine oculis-related homeobox 1 homolog (Drosophila) 0.486
Six3 sine oculis-related homeobox 3 homolog (Drosophila) 0.484
Lhx1 LIM homeobox protein 1 0.480
Lmx1b LIM homeobox transcription factor 1 beta 0.471
Mdm2 transformed mouse 3T3 cell double minute 2 0.466
Dcc deleted in colorectal carcinoma 0.465
Fgf3 fibroblast growth factor 3 0.464
Adra2a adrenergic receptor, alpha 2a 0.450
Pou3f3 POU domain, class 3, transcription factor 3 0.439
Otx1 orthodenticle homolog 1 (Drosophila) 0.437
Hand1 heart and neural crest derivatives expressed transcript 1 0.424
Insm1 insulinoma-associated 1 0.423
Vsx2 visual system homeobox 2 0.416
Mab21l2 mab-21-like 2 (C. elegans) 0.414
Reln reelin 0.396
Nog noggin 0.390
En1 engrailed 1 0.390
Flt1 FMS-like tyrosine kinase 1 0.385
Gata6 GATA binding protein 6 0.384
Hdac1 histone deacetylase 1 0.380
Grb10 growth factor receptor bound protein 10 0.375
Alx4 aristaless-like homeobox 4 0.372
Tcfap2c transcription factor AP-2, gamma 0.370
Ret ret proto-oncogene 0.366
Onecut1 one cut domain, family member 1 0.356
Hoxd11 homeobox D11 0.354
Cabp5 calcium binding protein 5 0.353
Nos3 nitric oxide synthase 3, endothelial cell 0.353
Efna2 ephrin A2 0.353
Dlx5 distal-less homeobox 5 0.352
Rarg retinoic acid receptor, gamma 0.351
Six6 sine oculis-related homeobox 6 homolog (Drosophila) 0.347
Zic1 zinc finger protein of the cerebellum 1 0.346
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Caenorhabditis elegans
Name Description Probability Func Analog Organism
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Danio rerio
Name Description Probability Func Analog Organism
neurod neurogenic differentiation 0.997
sox9a SRY-box containing gene 9a 0.992
rx3 retinal homeobox gene 3 0.988
gdf6a growth differentiation factor 6a 0.988
pax2a paired box gene 2a 0.984
rx1 retinal homeobox gene 1 0.963
crb2a crumbs homolog 2a 0.961
cdh2 cadherin 2, neuronal 0.957
epb41l5 erythrocyte membrane protein band 4.1 like 5 0.953
hnf1ba HNF1 homeobox Ba 0.952
rx2 retinal homeobox gene 2 0.947
isl1 islet1 0.939
six3b sine oculis homeobox homolog 3b 0.938
fgf8a fibroblast growth factor 8 a 0.920
otx2 orthodenticle homolog 2 0.916
ift88 intraflagellar transport 88 homolog 0.913
prdm1a PR domain containing 1a, with ZNF domain 0.903
ptf1a pancreas specific transcription factor, 1a 0.885
bmp2b bone morphogenetic protein 2b 0.876
gbx2 gastrulation brain homeo box 2 0.868
pax6b paired box gene 6b 0.867
zic1 zic family member 1 (odd-paired homolog, Drosophila) 0.859
aldh1a3 aldehyde dehydrogenase 1 family, member A3 0.837
gata3 GATA-binding protein 3 0.836
crx cone-rod homeobox 0.834
cdipt CDP-diacylglycerol--inositol 3-phosphatidyltransferase (phosphatidylinositol synthase) 0.821
fsta follistatin a 0.809
dla deltaA 0.808
nr2e3 nuclear receptor subfamily 2, group E, member 3 0.786
bmp4 bone morphogenetic protein 4 0.775
otx5 orthodenticle homolog 5 0.773
tbx2b T-box 2b 0.767
six3a sine oculis homeobox homolog 3a 0.756
otpb orthopedia homolog b 0.754
kif5aa kinesin family member 5A, a 0.738
jag2 jagged 2 0.717
eya1 eyes absent homolog 1 0.717
crabp2a cellular retinoic acid binding protein 2, a 0.708
boc brother of CDO 0.706
meis2.1 myeloid ecotropic viral integration site 2.1 0.698
six4b sine oculis homeobox homolog 4b 0.676
irx1a iroquois homeobox protein 1, a 0.660
ahi1 Abelson helper integration site 1 0.660
foxi1 forkhead box I1 0.647
kif17 kinesin family member 17 0.646
flh floating head 0.635
tfap2a transcription factor AP-2 alpha 0.627
pcdh18b protocadherin 18b 0.602
chd chordin 0.596
fzd8a frizzled homolog 8a 0.585
vcana versican a 0.584
vsx1 visual system homeobox 1 homolog, chx10-like 0.575
eng2b engrailed 2b 0.573
irx1b iroquois homeobox protein 1, b 0.569
lmx1b.1 LIM homeobox transcription factor 1, beta 1 0.565
foxg1a forkhead box G1a 0.550
pcdh8 protocadherin 8 0.535
rcv1 recoverin 0.530
ptch1 patched 1 0.520
sox11a SRY-box containing gene 11a 0.505
irx4b iroquois homeobox protein 4b 0.499
irx7 iroquois homeobox protein 7 0.493
bhlhe22 basic helix-loop-helix family, member e22 0.488
atoh1b atonal homolog 1b 0.481
pax6a paired box gene 6a 0.477
tp63 tumor protein p63 0.475
fezf2 FEZ family zinc finger 2 0.472
zic2a zic family member 2 (odd-paired homolog, Drosophila), a 0.470
gbx1 gastrulation brain homeobox 1 0.469
pcdh10b protocadherin 10b 0.447
atoh1a atonal homolog 1a 0.435
ndr2 nodal-related 2 0.435
pou3f3b POU class 3 homeobox 3b 0.425
atoh7 atonal homolog 7 0.421
nr2e1 nuclear receptor subfamily 2, group E, member 1 0.407
otx1b orthodenticle homolog 1b 0.401
vax2 ventral anterior homeobox 2 0.397
rorb RAR-related orphan receptor B 0.393
ncam1b neural cell adhesion molecule 1b 0.386
guca1c guanylate cyclase activator 1C 0.385
meis1 myeloid ecotropic viral integration 1 0.378
dctn1a dynactin 1a 0.368
sox2 SRY-box containing gene 2 0.364
stil TAL1 (SCL) interrupting locus 0.349
olig2 oligodendrocyte lineage transcription factor 2 0.346
ncam1a neural cell adhesion molecule 1a 0.340
barhl2 BarH-like 2 0.330
egr1 early growth response 1 0.329
tfeb transcription factor EB 0.325
shhb sonic hedgehog b 0.319
smarca4 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 0.313
pde6c phosphodiesterase 6C, cGMP-specific, cone, alpha prime 0.311
tfe3b transcription factor binding to IGHM enhancer 3b 0.309
hmx3 homeo box (H6 family) 3 0.307
dnmt1 DNA (cytosine-5-)-methyltransferase 1 0.307
zic5 zic family member 5 (odd-paired homolog, Drosophila) 0.306
clrn1 clarin 1 0.303
lrrc6 leucine rich repeat containing 6 0.298
zgc:162213 zgc:162213 0.295
nadl1.1 neural adhesion molecule L1.1 0.292
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Drosophila melanogaster
Name Description Probability Func Analog Organism
dac dachshund 0.660
ey eyeless 0.581
en engrailed 0.581
arr arrow 0.577
ara araucan 0.468
gsb gooseberry 0.419
sca scabrous 0.384
ro rough 0.370
ds dachsous 0.340
ft fat 0.319
ci cubitus interruptus 0.311
Antp Antennapedia 0.302
eyg eyegone 0.293
argos CG4531 gene product from transcript CG4531-RA 0.265
sens senseless 0.237
so sine oculis 0.228
y yellow 0.214
Ubx Ultrabithorax 0.207
eya eyes absent 0.185
amos absent MD neurons and olfactory sensilla 0.180
Pak PAK-kinase 0.165
pb proboscipedia 0.164
Uba2 Smt3 activating enzyme 2 0.160
Tom Twin of m4 0.157
E(spl) Enhancer of split 0.154
Notum CG13076 gene product from transcript CG13076-RB 0.152
Dll Distal-less 0.143
klu klumpfuss 0.138
Kr Kruppel 0.134
stan starry night 0.126
hth homothorax 0.124
Chro Chromator 0.123
lin lines 0.113
nkd naked cuticle 0.113
toy twin of eyeless 0.112
fz frizzled 0.111
nub nubbin 0.111
SoxN SoxNeuro 0.104
ttv tout-velu 0.103
slp1 sloppy paired 1 0.100
lz lozenge 0.098
LIMK1 LIM-kinase1 0.095
robo3 CG5423 gene product from transcript CG5423-RA 0.095
tld tolloid 0.093
ato atonal 0.090
Cka Connector of kinase to AP-1 0.087
al aristaless 0.087
Zn72D CG5215 gene product from transcript CG5215-RB 0.087
CG5146 CG5146 gene product from transcript CG5146-RA 0.086
ed echinoid 0.085
Eip93F CG18389 gene product from transcript CG18389-RB 0.082
gro groucho 0.081
Ced-12 CG5336 gene product from transcript CG5336-RA 0.080
ase asense 0.078
18w 18 wheeler 0.078
dan distal antenna 0.078
comm commissureless 0.076
prd paired 0.075
oc ocelliless 0.073
Poxn Pox neuro 0.073
svp seven up 0.072
Dfd Deformed 0.072
Ptpmeg CG1228 gene product from transcript CG1228-RD 0.071
CG6370 CG6370 gene product from transcript CG6370-RA 0.070
Awh Arrowhead 0.069
bib big brain 0.068
trc tricornered 0.067
wg wingless 0.063
AGO1 Argonaute-1 0.062
odd odd skipped 0.062
wls wntless 0.062
ems empty spiracles 0.062
frc fringe connection 0.061
Akt1 CG4006 gene product from transcript CG4006-RA 0.061
caup caupolican 0.060
Pi3K92E CG4141 gene product from transcript CG4141-RB 0.059
Optix CG18455 gene product from transcript CG18455-RA 0.057
ac achaete 0.056
mira miranda 0.056
MED24 Mediator complex subunit 24 0.055
D Dichaete 0.055
XNP CG4548 gene product from transcript CG4548-RA 0.054
brm brahma 0.053
tsh teashirt 0.053
brk brinker 0.051
nompA no mechanoreceptor potential A 0.051
Oli Olig family 0.050
rn rotund 0.050
ninaA neither inactivation nor afterpotential A 0.050
nct nicastrin 0.050
ytr yantar 0.049
iHog interference Hedgehog 0.049
B-H1 BarH1 0.049
Ser Serrate 0.048
CG7757 CG7757 gene product from transcript CG7757-RA 0.047
m4 E(spl) region transcript m4 0.047
org-1 optomotor-blind-related-gene-1 0.047
CG9772 CG9772 gene product from transcript CG9772-RB 0.045
salm spalt major 0.045
Lim1 CG11354 gene product from transcript CG11354-RA 0.044
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Homo sapiens
Name Description Probability Func Analog Organism
HDAC2 histone deacetylase 2 0.311
NKX2-5 NK2 transcription factor related, locus 5 (Drosophila) 0.015
PTPN1 protein tyrosine phosphatase, non-receptor type 1 0.013
SIN3A SIN3 homolog A, transcription regulator (yeast) 0.013
MLLT4 myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 4 0.010
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Rattus norvegicus
Name Description Probability Func Analog Organism
Rorb RAR-related orphan receptor B 0.135
Drd1a dopamine receptor D1A 0.116
Ptf1a pancreas specific transcription factor, 1a 0.111
Efna5 ephrin A5 0.105
Cp ceruloplasmin 0.087
Degs2 degenerative spermatocyte homolog 2, lipid desaturase (Drosophila) 0.083
Prph2 peripherin 2 0.080
Nrl neural retina leucine zipper 0.078
Cdh22 cadherin 22 0.075
Syt6 synaptotagmin VI 0.063
Kcnj3 potassium inwardly-rectifying channel, subfamily J, member 3 0.063
Rbp3 retinol binding protein 3, interstitial 0.059
Dlg4 discs, large homolog 4 (Drosophila) 0.057
Kdelr2 KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 2 0.055
Ghrh growth hormone releasing hormone 0.054
Chgb chromogranin B 0.051
Sema3a sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A 0.051
Flt1 FMS-related tyrosine kinase 1 0.050
Copb2 coatomer protein complex, subunit beta 2 (beta prime) 0.049
Serpini2 serine (or cysteine) peptidase inhibitor, clade I, member 2 0.045
Egr3 early growth response 3 0.044
Glra2 glycine receptor, alpha 2 0.043
Fgd4 FYVE, RhoGEF and PH domain containing 4 0.042
Bcl3 B-cell CLL/lymphoma 3 0.041
Cish cytokine inducible SH2-containing protein 0.040
Insrr insulin receptor-related receptor 0.040
Ng23 Ng23 protein 0.040
Rnf138 ring finger protein 138 0.040
Ostc oligosaccharyltransferase complex subunit 0.040
Lphn2 latrophilin 2 0.040
Sec22b SEC22 vesicle trafficking protein homolog B (S. cerevisiae) 0.039
Scnn1g sodium channel, nonvoltage-gated 1, gamma 0.039
Bace1 beta-site APP cleaving enzyme 1 0.038
Tnr tenascin R 0.038
Syt4 synaptotagmin IV 0.037
Vom1r97 vomeronasal 1 receptor 97 0.037
Rho rhodopsin 0.036
Trpv1 transient receptor potential cation channel, subfamily V, member 1 0.036
Gria4 glutamate receptor, ionotrophic, AMPA 4 0.036
Grm1 glutamate receptor, metabotropic 1 0.035
Drd4 dopamine receptor D4 0.035
Hnrnph2 heterogeneous nuclear ribonucleoprotein H2 (H') 0.034
Pcsk2 proprotein convertase subtilisin/kexin type 2 0.034
Kcnj6 potassium inwardly-rectifying channel, subfamily J, member 6 0.034
Camk1g calcium/calmodulin-dependent protein kinase IG 0.033
Cyp11b3 cytochrome P450, family 11, subfamily b, polypeptide 3 0.033
Nup153 nucleoporin 153 0.031
Elavl4 ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D) 0.031
Fabp2 fatty acid binding protein 2, intestinal 0.031
Cacna1f calcium channel, voltage-dependent, L type, alpha 1F subunit 0.031
Nfia nuclear factor I/A 0.030
Fgfr2 fibroblast growth factor receptor 2 0.030
Crem cAMP responsive element modulator 0.030
Epas1 endothelial PAS domain protein 1 0.030
Gnat1 guanine nucleotide binding protein (G protein), alpha transducing 1 0.029
Tbx2 T-box 2 0.029
Cabp1 calcium binding protein 1 0.029
Stc1 stanniocalcin 1 0.028
Lim2 lens intrinsic membrane protein 2 0.028
Mocs3 molybdenum cofactor synthesis 3 0.028
Htr6 5-hydroxytryptamine (serotonin) receptor 6 0.028
Ak2 adenylate kinase 2 0.027
Abo ABO blood group (transferase A, alpha 1-3-N-acetylgalactosaminyltransferase; transferase B, alpha 1-3-galactosyltransferase) 0.027
Sebox SEBOX homeobox 0.027
Kl Klotho 0.027
Icam1 intercellular adhesion molecule 1 0.027
Cited1 Cbp/p300-interacting transactivator with Glu/Asp-rich carboxy-terminal domain 1 0.027
Mib1 mindbomb homolog 1 (Drosophila) 0.026
Cryba1 crystallin, beta A1 0.026
LOC100365904 hypothetical protein LOC100365904 0.026
Amh anti-Mullerian hormone 0.026
Sorbs2 sorbin and SH3 domain containing 2 0.026
Tspy1 testis specific protein, Y-linked 1 0.026
Crx cone-rod homeobox 0.025
St8sia2 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2 0.025
Agtr1b angiotensin II receptor, type 1b 0.025
RGD1560880 similar to RIKEN cDNA 2310002J15 0.025
Rax retina and anterior neural fold homeobox 0.025
Topors topoisomerase I binding, arginine/serine-rich 0.025
Acvr1 activin A receptor, type I 0.025
Grk1 G protein-coupled receptor kinase 1 0.025
Vip vasoactive intestinal peptide 0.025
Cacna1g calcium channel, voltage-dependent, T type, alpha 1G subunit 0.025
Kcnn2 potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2 0.024
Tcfap2a transcription factor AP-2, alpha 0.024
RGD1560171 similar to PRO0149 protein 0.024
Il5 interleukin 5 0.024
Pde4b phosphodiesterase 4B, cAMP specific 0.024
Npy5r neuropeptide Y receptor Y5 0.024
Add2 adducin 2 (beta) 0.024
Stard10 StAR-related lipid transfer (START) domain containing 10 0.024
Hnmt histamine N-methyltransferase 0.024
Nr2c2 nuclear receptor subfamily 2, group C, member 2 0.024
Mospd2 motile sperm domain containing 2 0.024
Necab1 N-terminal EF-hand calcium binding protein 1 0.023
Amph amphiphysin 0.023
Scgb1c1 secretoglobin, family 1C, member 1 0.023
Accn4 amiloride-sensitive cation channel 4, pituitary 0.023
Crygs crystallin, gamma S 0.023
Nfkb1 nuclear factor of kappa light polypeptide gene enhancer in B-cells 1 0.023
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Saccharomyces cerevisiae
Name Description Probability Func Analog Organism