IMP

Process View

Danio rerio

15 genes annotated in zebrafish

aromatic compound catabolic process

GO:0019439

The chemical reactions and pathways resulting in the breakdown of aromatic compounds, any substance containing an aromatic carbon ring.

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Known genes in the process in zebrafish Include functional analogs

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Gene Predictions

Click on a gene's description to view its network relationships with genes known to be involved in "aromatic compound catabolic process"

Show only novel predictions Show only unknown genes Highlight genes with functional analogs involved in "aromatic compound catabolic process" (in gray)

Name	Description	Probability	Func Analog Organism
ef1a	elongation factor 1-alpha	0.217	Worm
bactin2	bactin2	0.136
sumo3a	SMT3 suppressor of mif two 3 homolog 3a	0.129
atp1a1	ATPase, Na+/K+ transporting, alpha 1 polypeptide	0.115
plxnb2a	plexin b2a	0.102	Mouse
etf1	eukaryotic translation termination factor 1	0.087
mybl2	myeloblastosis oncogene-like 2	0.087
pcna	proliferating cell nuclear antigen	0.085	Human
pafah1b1b	platelet-activating factor acetylhydrolase, isoform Ib, alpha subunit b	0.083	Mouse
rpl3	ribosomal protein L3	0.078
eif3s10	eukaryotic translation initiation factor 3, subunit 10 (theta)	0.073
tpm4	tropomyosin 4	0.072
hspa4a	heat shock protein 4a	0.072	Yeast
myhz1.2	myosin, heavy polypeptide 1.2, skeletal muscle	0.065
atp1b1b	ATPase, Na+/K+ transporting, beta 1b polypeptide	0.064
myhz2	myosin, heavy polypeptide 2, fast muscle specific	0.064	Fly
fhla	four and a half LIM domains a	0.061
msh2	mutS homolog 2 (E. coli)	0.059	Human Yeast Mouse
smyhc1	slow myosin heavy chain 1	0.056	Mouse Fly
wnt2	wingless-type MMTV integration site family member 2	0.056
aaas	achalasia, adrenocortical insufficiency, alacrimia	0.055
eomesa	eomesodermin homolog a	0.054
bida	BH3 interacting domain death agonist	0.052
tnni2a.4	troponin I, skeletal, fast 2a.4	0.048
tnnc1b	troponin C type 1b (slow)	0.047
atp6v0ca	ATPase, H+ transporting, lysosomal, V0 subunit c, a	0.047
bcl2l10	BCL2-like 10 (apoptosis facilitator)	0.047
sip1	survival of motor neuron protein interacting protein 1	0.043
mga	MAX gene associated	0.043
hnrnpab	heterogeneous nuclear ribonucleoprotein A/B	0.043
hmga1a	high mobility group AT-hook 1a	0.041	Human
arpc5a	actin related protein 2/3 complex, subunit 5A	0.038
gna13b	guanine nucleotide binding protein (G protein), alpha 13b	0.037
sncgb	synuclein, gamma b (breast cancer-specific protein 1)	0.037
nanos3	nanos homolog 3	0.037
copeb	core promoter element binding protein	0.036
sbf1	SET binding factor 1	0.036	Human
gna12	guanine nucleotide binding protein (G protein) alpha 12	0.036
vamp2	vesicle-associated membrane protein 2	0.036
ifrd2	interferon-related developmental regulator 2	0.035
rras	related RAS viral (r-ras) oncogene homolog	0.035	Human Yeast
yrk	Yes-related kinase	0.034
atp6v1h	ATPase, H+ transporting, lysosomal, V1 subunit H	0.034
ache	acetylcholinesterase	0.034
api5	apoptosis inhibitor 5	0.034
rnaset2	ribonuclease T2	0.033
atp1a1a.4	ATPase, Na+/K+ transporting, alpha 1a.4 polypeptide	0.033	Human Zebrafish Mouse Rat Worm Fly
ran	ras-related nuclear protein	0.032
bcl2l1	bcl2-like 1	0.032	Worm
rab1a	RAB1A, member RAS oncogene family	0.032	Human
khdrbs1a	KH domain containing, RNA binding, signal transduction associated 1a	0.031
ptpn11a	protein tyrosine phosphatase, non-receptor type 11, a	0.031
snx6	sorting nexin 6	0.031
sox11b	SRY-box containing gene 11b	0.031
ung	uracil-DNA glycosylase	0.030
eef2b	eukaryotic translation elongation factor 2b	0.030	Yeast Mouse
pak2a	p21 (CDKN1A)-activated kinase 2a	0.030
ywhaqb	tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide b	0.030
rab25	RAB25, member RAS oncogene family	0.029	Yeast Fly
dlg1	discs, large (Drosophila) homolog 1	0.029
ybx1	Y box binding protein 1	0.029
rbm4.1	RNA binding motif protein 4.1	0.028
eif3d	eukaryotic translation initiation factor 3, subunit D	0.028
sass6	spindle assembly 6 homolog (C. elegans)	0.028
zgc:66195	zgc:66195	0.027
ndufs4	NADH dehydrogenase (ubiquinone) Fe-S protein 4, (NADH-coenzyme Q reductase)	0.026
calb2a	calbindin 2a	0.026
crestin	crestin	0.026
ryr3	ryanodine receptor 3	0.026
upf3a	UPF3 regulator of nonsense transcripts homolog A (yeast)	0.025	Worm
nf1a	neurofibromin 1a	0.025	Mouse Rat Fly
zgc:77052	zgc:77052	0.025
stc1l	stanniocalcin 1, like	0.025
zgc:112425	zgc:112425	0.025
srpr	signal recognition particle receptor (docking protein)	0.025
msna	moesin a	0.025
pob	partial optokinetic response b	0.025
mcm6	MCM6 minichromosome maintenance deficient 6, mitotin (S. cerevisiae)	0.025	Human
rhoaa	ras homolog gene family, member Aa	0.025	Yeast Worm Fly
zgc:92127	zgc:92127	0.024
upf2	UPF2 regulator of nonsense transcripts homolog (yeast)	0.024
bms1l	BMS1-like, ribosome assembly protein (yeast)	0.024
hn1l	hematological and neurological expressed 1-like	0.024
mecp2	methyl CpG binding protein 2	0.024
gnaia	guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide a	0.024
cyp2y3	cytochrome P450, family 2, subfamily Y, polypeptide 3	0.023
slc43a1a	solute carrier family 43, member 1a	0.023
icn	ictacalcin	0.023
sept2	septin 2	0.023
ahsa1l	AHA1, activator of heat shock protein ATPase homolog 1, like	0.023	Human
trpm7	transient receptor potential cation channel, subfamily M, member 7	0.023
cct5	chaperonin containing TCP1, subunit 5 (epsilon)	0.023
tmem93	transmembrane protein 93	0.023
dlat	dihydrolipoamide S-acetyltransferase (E2 component of pyruvate dehydrogenase complex)	0.023
h3f3c	H3 histone, family 3C	0.023
smu1	smu-1 suppressor of mec-8 and unc-52 homolog (C. elegans)	0.023
rab7	RAB7, member RAS oncogene family	0.023	Human Yeast Worm
cdc42	cell division cycle 42	0.023	Yeast Mouse Worm Fly
acvr2a	activin receptor IIa	0.022
zgc:77517	zgc:77517	0.022
hadha	hydroxyacyl-Coenzyme A dehydrogenase/3-ketoacyl-Coenzyme A thiolase/enoyl-Coenzyme A hydratase, alpha subunit	0.022
atp1b2a	ATPase, Na+/K+ transporting, beta 2a polypeptide	0.022
rtcd1	RNA terminal phosphate cyclase domain 1	0.022
stau2	staufen, RNA binding protein, homolog 2 (Drosophila)	0.022
yes1	v-yes-1 Yamaguchi sarcoma viral oncogene homolog 1	0.022
polr2d	polymerase (RNA) II (DNA directed) polypeptide D	0.022
smg5	Smg-5 homolog, nonsense mediated mRNA decay factor (C. elegans)	0.022
ube2v2	ubiquitin-conjugating enzyme E2 variant 2	0.022	Human
ncor1	nuclear receptor co-repressor 1	0.021
rpa2	replication protein A2	0.021
hmgb2b	high-mobility group box 2b	0.021
csrp1a	cysteine and glycine-rich protein 1a	0.021
rac1	ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1)	0.021
zgc:113143	zgc:113143	0.021	Human
zbtb4	zinc finger and BTB domain containing 4	0.021
pgrmc2	progesterone receptor membrane component 2	0.021
plaa	phospholipase A2-activating protein	0.021
LOC570775	protein argonaute-1-like	0.021
atp6v1al	ATPase, H+ transporting, lysosomal V1 subunit A, like	0.020
tnnt3b	troponin T3b, skeletal, fast	0.020	Human
cdc42ep1	CDC42 effector protein (Rho GTPase binding) 1	0.020
arf5	ADP-ribosylation factor 5	0.020
strap	serine/threonine kinase receptor associated protein	0.020
scamp2	secretory carrier membrane protein 2	0.020
scinlb	scinderin like b	0.020
tm9sf2	transmembrane 9 superfamily member 2	0.020
eya2	eyes absent homolog 2 (Drosophila)	0.019
tgfbr2	transforming growth factor, beta receptor II	0.019
elavl1	ELAV (embryonic lethal, abnormal vision, Drosophila)-like 1 (Hu antigen R)	0.019
cand1	cullin-associated and neddylation-dissociated 1	0.019
ilf2	interleukin enhancer binding factor 2	0.019
ilk	integrin linked kinase	0.019
aox3	aldehyde oxidase 3	0.019
macf1	microtubule-actin crosslinking factor 1	0.018
ddx39aa	DEAD (Asp-Glu-Ala-Asp) box polypeptide 39Aa	0.018	Yeast
psen1	presenilin 1	0.018
s100a10b	S100 calcium binding protein A10b	0.018	Human
ap2a1	adaptor-related protein complex 2, alpha 1 subunit	0.018
ddx19	DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 19 (DBP5 homolog, yeast)	0.018	Yeast
pola2	polymerase (DNA directed), alpha 2	0.018
stau1	staufen, RNA binding protein, homolog 1 (Drosophila)	0.018
yap1	Yes-associated protein 1	0.018
zgc:109901	zgc:109901	0.018
zgc:154089	zgc:154089	0.018
alcamb	activated leukocyte cell adhesion molecule b	0.018
piwil1	piwi-like 1 (Drosophila)	0.017	Fly
tgfb3	transforming growth factor, beta 3	0.017
mif	macrophage migration inhibitory factor	0.017
eif3b	eukaryotic translation initiation factor 3, subunit B	0.017
ddx42	DEAD (Asp-Glu-Ala-Asp) box polypeptide 42	0.017
ruvbl1	RuvB-like 1 (E. coli)	0.017	Yeast
get4	golgi to ER traffic protein 4 homolog (S. cerevisiae)	0.017
tnni1al	troponin I, skeletal, slow like	0.017
sf1	splicing factor 1	0.017
ret1	receptor tyrosine kinase	0.017
zgc:56085	zgc:56085	0.017
calb2b	calbindin 2b, (calretinin)	0.017
gngt1	guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 1	0.017
ndel1a	nudE nuclear distribution gene E homolog like 1 (A. nidulans) A	0.017	Mouse
mms22l	MMS22-like, DNA repair protein	0.017
cacnb1	calcium channel, voltage-dependent, beta 1 subunit	0.017
ywhabl	tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide like	0.016
adrb3a	adrenergic receptor, beta 3a	0.016
cftr	cystic fibrosis transmembrane conductance regulator, ATP-binding cassette (sub-family C, member 7)	0.016
si:ch211-254d18.3	si:ch211-254d18.3	0.016	Yeast
prkcbp1l	protein kinase C binding protein 1, like	0.016
ptbp1b	polypyrimidine tract binding protein 1b	0.016
smyd1b	SET and MYND domain containing 1b	0.016
ck2b	casein kinase 2 beta	0.016
srm	spermidine synthase	0.016
zgc:100919	zgc:100919	0.016
six1b	sine oculis homeobox homolog 1b	0.016
gnat2	guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 2	0.016	Mouse
snrpc	small nuclear ribonucleoprotein polypeptide C	0.015
iqgap1	IQ motif containing GTPase activating protein 1	0.015
flot2a	flotillin 2a	0.015
zgc:73107	zgc:73107	0.015
nfe2l3	nuclear factor (erythroid-derived 2)-like 3	0.015
ctps	CTP synthase	0.015
im:7148292	im:7148292	0.015
zgc:65979	zgc:65979	0.015
calm3b	calmodulin 3b (phosphorylase kinase, delta)	0.015
sdad1	SDA1 domain containing 1	0.015
rock2a	rho-associated, coiled-coil containing protein kinase 2a	0.015
txnrd1	thioredoxin reductase 1	0.015
dnajb6b	DnaJ (Hsp40) homolog, subfamily B, member 6b	0.015	Human
si:dkey-228g21.4	si:dkey-228g21.4	0.015
atp5f1	ATP synthase, H+ transporting, mitochondrial F0 complex, subunit b, isoform 1	0.015	Human
nedd8	neural precursor cell expressed, developmentally down-regulated 8	0.015
sncb	synuclein, beta	0.015
hk1	hexokinase 1	0.015
hspa4b	heat shock protein 4b	0.015	Yeast
mylz2	myosin, light polypeptide 2, skeletal muscle	0.015
nrp2b	neuropilin 2b	0.015
pcdh10a	protocadherin 10a	0.015
pknox1.2	pbx/knotted 1 homeobox 1.2	0.015
arf2	ADP-ribosylation factor 2	0.014
tnnt2a	troponin T2a, cardiac	0.014
esyt3	extended synaptotagmin-like protein 3	0.014
smyhc2	slow myosin heavy chain 2	0.014	Human Mouse Rat Fly
gna14	guanine nucleotide binding protein (G protein), alpha 14	0.014
ca2	carbonic anhydrase II	0.014
snrpd3	small nuclear ribonucleoprotein D3 polypeptide	0.014
si:ch1073-463l14.2	si:ch1073-463l14.2	0.014
psmb2	proteasome (prosome, macropain) subunit, beta type, 2	0.014
tfe3b	transcription factor binding to IGHM enhancer 3b	0.014
immt	inner membrane protein, mitochondrial (mitofilin)	0.014
oaz2a	ornithine decarboxylase antizyme 2a	0.014
grina	glutamate receptor, ionotropic, N-methyl D-aspartate-associated protein 1 (glutamate binding)	0.014
aurkb	aurora kinase B	0.014
sult2st1	sulfotransferase family 2, cytosolic sulfotransferase 1	0.014
hk2	hexokinase 2	0.014
psma1	proteasome (prosome, macropain) subunit, alpha type, 1	0.014
ldhd	lactate dehydrogenase D	0.014
zgc:91910	zgc:91910	0.014
fam60al	family with sequence similarity 60, member A, like	0.014
psmc6	proteasome (prosome, macropain) 26S subunit, ATPase, 6	0.014
pfn2	profilin 2	0.014	Human
ryr1b	ryanodine receptor 1b (skeletal)	0.014
ndufs2	NADH dehydrogenase (ubiquinone) Fe-S protein 2	0.014
im:7163548	im:7163548	0.014
cct7	chaperonin containing TCP1, subunit 7 (eta)	0.014
sox4a	SRY-box containing gene 4a	0.013
srsf1a	serine/arginine-rich splicing factor 1a	0.013	Yeast
bactin1	bactin1	0.013
rfc4	replication factor C (activator 1) 4	0.013
rfc3	replication factor C (activator 1) 3	0.013	Human Yeast
krt18	keratin 18	0.013
wnt2bb	wingless-type MMTV integration site family, member 2Bb	0.013
tnni1b	troponin I, skeletal, slow b	0.013
LOC567638	hypothetical LOC567638	0.013
mycbp2	MYC binding protein 2	0.013
kif20bb	kinesin family member 20Bb	0.013
hmgn3	high mobility group nucleosomal binding domain 3	0.013
adrb2a	adrenergic receptor, beta 2a	0.013
nup50	nucleoporin 50	0.013
pvalb8	parvalbumin 8	0.013
rbm4.3	RNA binding motif protein 4.3	0.013
hmgcs1	3-hydroxy-3-methylglutaryl-Coenzyme A synthase 1 (soluble)	0.013
rab5c	RAB5C, member RAS oncogene family	0.013	Human Yeast
setd8a	SET domain containing (lysine methyltransferase) 8a	0.013
rae1	RAE1 RNA export 1 homolog (S. pombe)	0.013
psmd6	proteasome (prosome, macropain) 26S subunit, non-ATPase, 6	0.013
lin7b	lin-7 homolog B (C. elegans)	0.013
gna11	guanine nucleotide binding protein (G protein), alpha 11 (Gq class)	0.013
ckap5	cytoskeleton associated protein 5	0.013
rab13	RAB13, member RAS oncogene family	0.013	Human Yeast
rab32a	RAB32a, member RAS oncogene family	0.013	Human
hug	HuG	0.012
nucks1a	nuclear casein kinase and cyclin-dependent kinase substrate 1a	0.012
hsd17b2	hydroxysteroid (17-beta) dehydrogenase 2	0.012
rgma	RGM domain family, member A	0.012
im:7137453	im:7137453	0.012
thoc4	THO complex 4	0.012
ndufs5	NADH dehydrogenase (ubiquinone) Fe-S protein 5	0.012
zgc:101724	zgc:101724	0.012
ivns1abpa	influenza virus NS1A binding protein a	0.012
stk25b	serine/threonine kinase 25b	0.012
smg7	Smg-7 homolog, nonsense mediated mRNA decay factor (C. elegans)	0.012
nf1b	neurofibromin 1b	0.012	Mouse Rat Fly
desma	desmin a	0.012
s100s	S100 calcium binding protein S	0.012
actl6a	actin-like 6A	0.012
ppargc1al	peroxisome proliferator-activated receptor gamma, coactivator 1 alpha like	0.012
unc119.1	unc-119 homolog 1	0.012
casz1	castor zinc finger 1	0.012
mastl	microtubule associated serine/threonine kinase-like	0.012
mcl1b	myeloid cell leukemia sequence 1b	0.012	Worm
prim1	primase polypeptide 1	0.012
eif2c4	eukaryotic translation initiation factor 2C, 4	0.012
vps26bl	vacuolar protein sorting 26 homolog B, like	0.012
lrrn1	leucine rich repeat neuronal 1	0.012
utp6	UTP6, small subunit (SSU) processome component, homolog (yeast)	0.012
zgc:136930	zgc:136930	0.012
mtp	microsomal triglyceride transfer protein	0.012
atp6ap1	ATPase, H+ transporting, lysosomal accessory protein 1	0.012
wu:fc31g04	wu:fc31g04	0.012
sb:cb730	sb:cb730	0.012
tgif1	TGFB-induced factor homeobox 1	0.012
spsb4a	splA/ryanodine receptor domain and SOCS box containing 4a	0.012
rap1b	RAS related protein 1b	0.012	Human Yeast Mouse Rat Fly
zgc:56683	zgc:56683	0.012
dnajb1b	DnaJ (Hsp40) homolog, subfamily B, member 1b	0.012	Human
eef1b2	eukaryotic translation elongation factor 1 beta 2	0.011
cct4	chaperonin containing TCP1, subunit 4 (delta)	0.011
cmyb	transcription factor cmyb	0.011
hdac3	histone deacetylase 3	0.011
zgc:92872	zgc:92872	0.011
flncb	filamin C, gamma b (actin binding protein 280)	0.011
gclc	glutamate-cysteine ligase, catalytic subunit	0.011
s1pr1	sphingosine-1-phosphate receptor 1	0.011	Rat
si:dkeyp-22b2.3	si:dkeyp-22b2.3	0.011
efna1b	ephrin A1b	0.011
aldh4a1	aldehyde dehydrogenase 4 family, member A1	0.011
birc2	baculoviral IAP repeat-containing 2	0.011
esr2b	estrogen receptor 2b	0.011
emx2	empty spiracles homeobox 2	0.011
buc	bucky ball	0.011
ppp4ca	protein phosphatase 4 (formerly X), catalytic subunit a	0.011
cox5ab	cytochrome c oxidase subunit Vab	0.011
park7	parkinson disease (autosomal recessive, early onset) 7	0.011
gapdhs	glyceraldehyde-3-phosphate dehydrogenase, spermatogenic	0.011
ndufb8	NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 8	0.011
zgc:113625	zgc:113625	0.011
gna13a	guanine nucleotide binding protein (G protein), alpha 13a	0.011
ntrk2a	neurotrophic tyrosine kinase, receptor, type 2a	0.011
ints7	integrator complex subunit 7	0.011
gpr22	G protein-coupled receptor 22	0.011
s100t	S100 calcium binding protein T	0.011
cnih	cornichon homolog (Drosophila)	0.011
zgc:65894	zgc:65894	0.011
gng12a	guanine nucleotide binding protein (G protein), gamma 12a	0.011
chga	chromogranin A	0.011
nme2b.2	non-metastatic cells 2b.2, protein (NM23B) expressed in	0.011
sf3a2	splicing factor 3a, subunit 2	0.011
myhc4	myosin heavy chain 4	0.011	Fly
LOC100003514	protein kinase C alpha type-like	0.011
eif3ea	eukaryotic translation initiation factor 3, subunit E, a	0.011
chtopa	chromatin target of PRMT1a	0.011
psma6a	proteasome (prosome, macropain) subunit, alpha type, 6a	0.011
atp1a1a.2	ATPase, Na+/K+ transporting, alpha 1a.2 polypeptide	0.011	Human Zebrafish Mouse Rat Worm Fly
nrarpb	notch-regulated ankyrin repeat protein b	0.011
fancl	Fanconi anemia, complementation group L	0.011
wnt5a	wingless-type MMTV integration site family, member 5a	0.011
ispd	isoprenoid synthase domain containing	0.011
bik	BCL2-interacting killer (apoptosis-inducing)	0.011
slc25a10	solute carrier family 25 (mitochondrial carrier; dicarboxylate transporter), member 10	0.011
pde6g	phosphodiesterase 6G, cGMP-specific, rod, gamma	0.011
cdc7	cell division cycle 7 homolog (S. cerevisiae)	0.011
atp1b3b	ATPase, Na+/K+ transporting, beta 3b polypeptide	0.011	Human
tnnt3a	troponin T3a, skeletal, fast	0.011	Human
nadl1.2	neural adhesion molecule L1.2	0.011
sept9b	septin 9b	0.011
mapre1l	microtubule-associated protein, RP/EB family, member 1, like	0.010
pdcd6	programmed cell death 6	0.010
dclk2	doublecortin-like kinase 2	0.010
cul1b	cullin 1b	0.010
arnt2	aryl hydrocarbon receptor nuclear translocator 2	0.010
lrmp	lymphoid-restricted membrane protein	0.010
ankrd49	ankyrin repeat domain 49	0.010
olfm2	olfactomedin 2	0.010
cdc42l	cell division cycle 42, like	0.010	Yeast Worm Fly
tpm1	tropomyosin 1 (alpha)	0.010
eno2	enolase 2	0.010
boka	BCL2-related ovarian killer a	0.010	Worm
tardbp	TAR DNA binding protein	0.010
smc3	structural maintenance of chromosomes 3	0.010
fbxw7	F-box and WD repeat domain containing 7	0.010
eif3hb	eukaryotic translation initiation factor 3, subunit H, b	0.010
wu:fa27a01	wu:fa27a01	0.010
dmd	dystrophin	0.010
wu:fc51f04	wu:fc51f04	0.010
racgap1	Rac GTPase-activating protein 1	0.010	Human Worm
flt1	fms-related tyrosine kinase 1 (vascular endothelial growth factor/vascular permeability factor receptor)	0.010
sdf2	stromal cell-derived factor 2	0.010
rbm4.2	RNA binding motif protein 4.2	0.010
rnd3b	Rho family GTPase 3b	0.010