IMP

Process View

Mus musculus

14 genes annotated in mouse

striatum development

The progression of the striatum over time from its initial formation until its mature state. The striatum is a region of the forebrain consisting of the caudate nucleus, putamen and fundus striati.

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Known genes in the process in mouse Include functional analogs

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Gene Predictions

Click on a gene's description to view its network relationships with genes known to be involved in "striatum development"

Show only novel predictions Show only unknown genes Highlight genes with functional analogs involved in "striatum development" (in gray)

Name	Description	Probability	Func Analog Organism
Rarg	retinoic acid receptor, gamma	0.999	Mouse
Rarb	retinoic acid receptor, beta	0.993
Bbs4	Bardet-Biedl syndrome 4 (human)	0.966
Bbs2	Bardet-Biedl syndrome 2 (human)	0.867
Rara	retinoic acid receptor, alpha	0.839	Mouse
Pax8	paired box gene 8	0.732
Pax2	paired box gene 2	0.678
Ednra	endothelin receptor type A	0.654
Tbx1	T-box 1	0.551
Fgfr1	fibroblast growth factor receptor 1	0.538
Grin1	glutamate receptor, ionotropic, NMDA1 (zeta 1)	0.426
Pnpla2	patatin-like phospholipase domain containing 2	0.388
Eya1	eyes absent 1 homolog (Drosophila)	0.355
Rxra	retinoid X receptor alpha	0.305
Pax3	paired box gene 3	0.303
Gli2	GLI-Kruppel family member GLI2	0.297
Otx2	orthodenticle homolog 2 (Drosophila)	0.292
Emx2	empty spiracles homolog 2 (Drosophila)	0.290
Foxc1	forkhead box C1	0.285
Ece1	endothelin converting enzyme 1	0.268
Fgf8	fibroblast growth factor 8	0.264
Smo	smoothened homolog (Drosophila)	0.256
Adrb1	adrenergic receptor, beta 1	0.254	Mouse
Pparg	peroxisome proliferator activated receptor gamma	0.240
Bbs1	Bardet-Biedl syndrome 1 (human)	0.231
Fgfr2	fibroblast growth factor receptor 2	0.201
Arl6	ADP-ribosylation factor-like 6	0.184
Hoxa3	homeobox A3	0.163
Foxc2	forkhead box C2	0.161
Sox9	SRY-box containing gene 9	0.161
Fgf10	fibroblast growth factor 10	0.156
Ntrk2	neurotrophic tyrosine kinase, receptor, type 2	0.151
Wnt9b	wingless-type MMTV integration site 9B	0.140
Meox2	mesenchyme homeobox 2	0.133
Shh	sonic hedgehog	0.129
Emx1	empty spiracles homolog 1 (Drosophila)	0.128
Sox4	SRY-box containing gene 4	0.128
Lhx1	LIM homeobox protein 1	0.111
Adrb3	adrenergic receptor, beta 3	0.108	Mouse
Dbp	D site albumin promoter binding protein	0.099
Dlx5	distal-less homeobox 5	0.099
Bmper	BMP-binding endothelial regulator	0.093
Sstr4	somatostatin receptor 4	0.088
Isl1	ISL1 transcription factor, LIM/homeodomain	0.087
Hoxa2	homeobox A2	0.087
Bmp4	bone morphogenetic protein 4	0.085
Msx1	homeobox, msh-like 1	0.083
Cckbr	cholecystokinin B receptor	0.081
Bmp7	bone morphogenetic protein 7	0.080
Gli3	GLI-Kruppel family member GLI3	0.080
Slc6a3	solute carrier family 6 (neurotransmitter transporter, dopamine), member 3	0.079
Hoxb3	homeobox B3	0.071
Cdkn1b	cyclin-dependent kinase inhibitor 1B	0.068
Dlx6	distal-less homeobox 6	0.067
Aldh1a1	aldehyde dehydrogenase family 1, subfamily A1	0.059	Mouse
Six1	sine oculis-related homeobox 1 homolog (Drosophila)	0.057
Hoxd3	homeobox D3	0.054
Nog	noggin	0.053
Tshr	thyroid stimulating hormone receptor	0.053
Ptpn11	protein tyrosine phosphatase, non-receptor type 11	0.051
Htr4	5 hydroxytryptamine (serotonin) receptor 4	0.050	Mouse
Lef1	lymphoid enhancer binding factor 1	0.050
Pbx1	pre B-cell leukemia transcription factor 1	0.047
Prrx1	paired related homeobox 1	0.046
Foxg1	forkhead box G1	0.044
ND6	NADH dehydrogenase subunit 6	0.041
Tgfb2	transforming growth factor, beta 2	0.040
Chrm1	cholinergic receptor, muscarinic 1, CNS	0.040
Ctnnb1	catenin (cadherin associated protein), beta 1	0.040
Insm1	insulinoma-associated 1	0.039
Shc3	src homology 2 domain-containing transforming protein C3	0.039
Hoxa5	homeobox A5	0.038
Ar	androgen receptor	0.037
Adra2c	adrenergic receptor, alpha 2c	0.036	Mouse
Gja5	gap junction protein, alpha 5	0.035
Csmd1	CUB and Sushi multiple domains 1	0.035
Hoxa1	homeobox A1	0.034
Alx3	aristaless-like homeobox 3	0.034
Plcg1	phospholipase C, gamma 1	0.034
Nodal	nodal	0.033
Prkaca	protein kinase, cAMP dependent, catalytic, alpha	0.032
Chrd	chordin	0.032
Npy2r	neuropeptide Y receptor Y2	0.031
Grid1	glutamate receptor, ionotropic, delta 1	0.029
Mesp1	mesoderm posterior 1	0.029
Kcnj11	potassium inwardly rectifying channel, subfamily J, member 11	0.029
Ghr	growth hormone receptor	0.028
Adrb2	adrenergic receptor, beta 2	0.028	Mouse
Rspo2	R-spondin 2 homolog (Xenopus laevis)	0.027
Nr2e1	nuclear receptor subfamily 2, group E, member 1	0.027
Kcnk3	potassium channel, subfamily K, member 3	0.027
Chd7	chromodomain helicase DNA binding protein 7	0.026
Pitx2	paired-like homeodomain transcription factor 2	0.026
Hand1	heart and neural crest derivatives expressed transcript 1	0.025
Tcfap2a	transcription factor AP-2, alpha	0.025
Rdh10	retinol dehydrogenase 10 (all-trans)	0.023
Esr1	estrogen receptor 1 (alpha)	0.023
Crhr1	corticotropin releasing hormone receptor 1	0.023
Sox11	SRY-box containing gene 11	0.023
Gabra2	gamma-aminobutyric acid (GABA) A receptor, subunit alpha 2	0.022
Hes5	hairy and enhancer of split 5 (Drosophila)	0.022
Nf1	neurofibromatosis 1	0.022
Neto1	neuropilin (NRP) and tolloid (TLL)-like 1	0.022
Npy5r	neuropeptide Y receptor Y5	0.022
Ret	ret proto-oncogene	0.021
Grm2	glutamate receptor, metabotropic 2	0.021
Trp63	transformation related protein 63	0.021
Kcna2	potassium voltage-gated channel, shaker-related subfamily, member 2	0.021
Gsc	goosecoid homeobox	0.021
Kcnv1	potassium channel, subfamily V, member 1	0.021
Olfr1509	olfactory receptor 1509	0.020
Dlx2	distal-less homeobox 2	0.019
Drd1a	dopamine receptor D1A	0.019
Prdm16	PR domain containing 16	0.019
Foxp1	forkhead box P1	0.019
Mkks	McKusick-Kaufman syndrome protein	0.019
Atp2b2	ATPase, Ca++ transporting, plasma membrane 2	0.019
Elf4	E74-like factor 4 (ets domain transcription factor)	0.019
Hand2	heart and neural crest derivatives expressed transcript 2	0.019
Ascl1	achaete-scute complex homolog 1 (Drosophila)	0.018
Gata3	GATA binding protein 3	0.018
Gria1	glutamate receptor, ionotropic, AMPA1 (alpha 1)	0.018
Wnt3a	wingless-related MMTV integration site 3A	0.018
Fgfrl1	fibroblast growth factor receptor-like 1	0.017
Lhx3	LIM homeobox protein 3	0.017
Cdh10	cadherin 10	0.017
Htr7	5-hydroxytryptamine (serotonin) receptor 7	0.017
Nhedc2	Na+/H+ exchanger domain containing 2	0.017
Trpc5	transient receptor potential cation channel, subfamily C, member 5	0.017
Gpr12	G-protein coupled receptor 12	0.017
Cdkn2c	cyclin-dependent kinase inhibitor 2C (p18, inhibits CDK4)	0.017
Fgfr3	fibroblast growth factor receptor 3	0.016
Lepr	leptin receptor	0.016
Grin2a	glutamate receptor, ionotropic, NMDA2A (epsilon 1)	0.016
Hrh1	histamine receptor H1	0.016
Wnt4	wingless-related MMTV integration site 4	0.016
Dab1	disabled homolog 1 (Drosophila)	0.016
Oprk1	opioid receptor, kappa 1	0.016
Arpp21	cyclic AMP-regulated phosphoprotein, 21	0.016
Dlgap1	discs, large (Drosophila) homolog-associated protein 1	0.016
Kcnk2	potassium channel, subfamily K, member 2	0.015
Pou3f3	POU domain, class 3, transcription factor 3	0.015
Ptch1	patched homolog 1	0.015
Lhx6	LIM homeobox protein 6	0.015
Twist2	twist homolog 2 (Drosophila)	0.015
Grm1	glutamate receptor, metabotropic 1	0.015
Atp4a	ATPase, H+/K+ exchanging, gastric, alpha polypeptide	0.015
Otx1	orthodenticle homolog 1 (Drosophila)	0.014
Cacna1e	calcium channel, voltage-dependent, R type, alpha 1E subunit	0.014
Gabrg3	gamma-aminobutyric acid (GABA) A receptor, subunit gamma 3	0.014
B3gat1	beta-1,3-glucuronyltransferase 1 (glucuronosyltransferase P)	0.014
Nkx1-2	NK1 transcription factor related, locus 2 (Drosophila)	0.014
Slc12a1	solute carrier family 12, member 1	0.014
Btrc	beta-transducin repeat containing protein	0.014
Kcnq1	potassium voltage-gated channel, subfamily Q, member 1	0.014
Tgfbr3	transforming growth factor, beta receptor III	0.014
Shisa9	shisa homolog 9 (Xenopus laevis)	0.014
Gast	gastrin	0.013
Nkx3-1	NK-3 transcription factor, locus 1 (Drosophila)	0.013
Rxrb	retinoid X receptor beta	0.013
Gfra2	glial cell line derived neurotrophic factor family receptor alpha 2	0.013
Sema6a	sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A	0.013
Ikzf1	IKAROS family zinc finger 1	0.013
Hes1	hairy and enhancer of split 1 (Drosophila)	0.013
Aldh1a7	aldehyde dehydrogenase family 1, subfamily A7	0.013	Mouse
Dlx1	distal-less homeobox 1	0.013
Cs	citrate synthase	0.012
Fgf5	fibroblast growth factor 5	0.012
Ppp1r1b	protein phosphatase 1, regulatory (inhibitor) subunit 1B	0.012
Gjb5	gap junction protein, beta 5	0.012
Gabrb2	gamma-aminobutyric acid (GABA) A receptor, subunit beta 2	0.012
Kcnj6	potassium inwardly-rectifying channel, subfamily J, member 6	0.012
Rorb	RAR-related orphan receptor beta	0.012
Pcdh15	protocadherin 15	0.012
Drd2	dopamine receptor D2	0.012	Rat
Gad2	glutamic acid decarboxylase 2	0.012
Sirt3	sirtuin 3 (silent mating type information regulation 2, homolog) 3 (S. cerevisiae)	0.012
Rb1	retinoblastoma 1	0.012
Neurod2	neurogenic differentiation 2	0.011
Pax1	paired box gene 1	0.011
Pou3f1	POU domain, class 3, transcription factor 1	0.011
Kcna4	potassium voltage-gated channel, shaker-related subfamily, member 4	0.011
Ppargc1a	peroxisome proliferative activated receptor, gamma, coactivator 1 alpha	0.011
Cdh8	cadherin 8	0.011
Kcne2	potassium voltage-gated channel, Isk-related subfamily, gene 2	0.011
Hoxb5	homeobox B5	0.011
Cldn8	claudin 8	0.011
Plxnd1	plexin D1	0.011
Acvr1	activin A receptor, type 1	0.011
Ucp3	uncoupling protein 3 (mitochondrial, proton carrier)	0.011
Trp53	transformation related protein 53	0.011
Wnt7a	wingless-related MMTV integration site 7A	0.011
Gpr26	G protein-coupled receptor 26	0.011
Krt2	keratin 2	0.011
Fign	fidgetin	0.011
Kcns2	K+ voltage-gated channel, subfamily S, 2	0.011
Per3	period homolog 3 (Drosophila)	0.011
Pgr	progesterone receptor	0.011
Cux2	cut-like homeobox 2	0.011
Lmx1b	LIM homeobox transcription factor 1 beta	0.011
Aldh1a2	aldehyde dehydrogenase family 1, subfamily A2	0.011	Mouse
Tectb	tectorin beta	0.011
Smpd3	sphingomyelin phosphodiesterase 3, neutral	0.011
Fezf2	Fez family zinc finger 2	0.011
Foxd2	forkhead box D2	0.011
Hoxc5	homeobox C5	0.011
Epha6	Eph receptor A6	0.010
Adora2a	adenosine A2a receptor	0.010
Adcy1	adenylate cyclase 1	0.010
3110047P20Rik	RIKEN cDNA 3110047P20 gene	0.010
Prlr	prolactin receptor	0.010
Bbs7	Bardet-Biedl syndrome 7 (human)	0.010
Camk2a	calcium/calmodulin-dependent protein kinase II alpha	0.010
Gabrb1	gamma-aminobutyric acid (GABA) A receptor, subunit beta 1	0.010
Clcnka	chloride channel Ka	0.010
Hrh3	histamine receptor H3	0.010
Fgf4	fibroblast growth factor 4	0.010
Ptprn2	protein tyrosine phosphatase, receptor type, N polypeptide 2	0.010
Ttc8	tetratricopeptide repeat domain 8	0.010
Il1rapl1	interleukin 1 receptor accessory protein-like 1	0.010