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Process View

Danio rerio

1 genes annotated in zebrafish

embryonic heart tube formation

The process that gives rise to the embryonic heart tube. This process pertains to the initial formation of a structure from unspecified parts. The embryonic heart tube is an epithelial tube that will give rise to the mature heart.

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Known genes in the process in zebrafish Include functional analogs

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Gene Predictions

Click on a gene's description to view its network relationships with genes known to be involved in "embryonic heart tube formation"

Show only novel predictions Show only unknown genes Highlight genes with functional analogs involved in "embryonic heart tube formation" (in gray)

Name	Description	Probability	Func Analog Organism
pax2a	paired box gene 2a	0.880
ptf1a	pancreas specific transcription factor, 1a	0.831	Zebrafish
isl1	islet1	0.602
atoh1a	atonal homolog 1a	0.587	Zebrafish
tbx5a	T-box 5a	0.502
neurod	neurogenic differentiation	0.385	Zebrafish
gata1a	GATA binding protein 1a	0.347
dla	deltaA	0.299
ascl1a	achaete-scute complex-like 1a (Drosophila)	0.271
dct	dopachrome tautomerase	0.256
evx1	even-skipped homeobox 1	0.240
hbbe3	hemoglobin beta embryonic-3	0.222
runx1	runt-related transcription factor 1	0.196
fli1a	friend leukemia integration 1a	0.179
atoh1b	atonal homolog 1b	0.175	Zebrafish
barhl2	BarH-like 2	0.174
kdrl	kinase insert domain receptor like	0.154
lmo2	LIM domain only 2 (rhombotin-like 1)	0.150
twist1b	twist1b	0.148
gdf6a	growth differentiation factor 6a	0.127
rx2	retinal homeobox gene 2	0.116
hhex	hematopoietically expressed homeobox	0.113
etv2	ets variant gene 2	0.108
msxc	muscle segment homeobox C	0.104
boc	brother of CDO	0.104
foxn4	forkhead box N4	0.099
col2a1a	collagen type II, alpha-1a	0.098
tbx1	T-box 1	0.098
ptch1	patched 1	0.096
slc17a7	solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 7	0.087
hoxa2b	homeo box A2b	0.084
alcama	activated leukocyte cell adhesion molecule a	0.084
eng2a	engrailed 2a	0.082
pax6b	paired box gene 6b	0.081
lmx1b.1	LIM homeobox transcription factor 1, beta 1	0.076
cmyb	transcription factor cmyb	0.073
mab21l2	mab-21-like 2	0.073
nkx2.2a	NK2 transcription factor related 2a	0.072
fgf10a	fibroblast growth factor 10a	0.070
notch1a	notch homolog 1a	0.070
hey2	hairy/enhancer-of-split related with YRPW motif 2	0.069
nkx3.2	NK3 homeobox 2	0.067
dlx2a	distal-less homeobox gene 2a	0.065
irx1a	iroquois homeobox protein 1, a	0.064
mitfa	microphthalmia-associated transcription factor a	0.063
znfl2a	zinc finger-like gene 2a	0.059
sox9a	SRY-box containing gene 9a	0.058
prox1	prospero-related homeobox gene 1	0.058
myod1	myogenic differentiation 1	0.058
lhx2b	LIM homeobox 2b	0.056
rx1	retinal homeobox gene 1	0.056
atoh1c	atonal homolog 1c	0.055	Zebrafish
fgf8a	fibroblast growth factor 8 a	0.055
sox10	SRY-box containing gene 10	0.054
myl7	myosin, light polypeptide 7, regulatory	0.052
dbx1b	developing brain homeobox 1b	0.050
vsx2	visual system homeobox 2	0.050
hoxb5b	homeo box B5b	0.050
lhx1b	LIM homeobox 1b	0.050
foxa1	forkhead box A1	0.045
ikzf1	IKAROS family zinc finger 1 (Ikaros)	0.042
pax6a	paired box gene 6a	0.042
nkx2.5	NK2 transcription factor related 5	0.041
hoxc4a	homeo box C4a	0.041
hoxb4a	homeo box B4a	0.040
tbx2b	T-box 2b	0.039
dlc	deltaC	0.039
nkx2.1a	NK2 homeobox 1a	0.038
otx5	orthodenticle homolog 5	0.034
tbx18	T-box 18	0.034
ascl1b	achaete-scute complex-like 1b (Drosophila)	0.034
hoxd4a	homeo box D4a	0.034
six2a	sine oculis-related homeobox 2a	0.033
hoxd11a	homeo box D11a	0.032
insm1b	insulinoma-associated 1b	0.031
fgf8b	fibroblast growth factor 8 b	0.031
foxa2	forkhead box A2	0.031
eng2b	engrailed 2b	0.030
irx4b	iroquois homeobox protein 4b	0.029
smarca4	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4	0.029
dmrt3a	doublesex and mab-3 related transcription factor 3a	0.029
aldh1a2	aldehyde dehydrogenase 1 family, member A2	0.028
meis3	myeloid ecotropic viral integration site 3	0.028
bmp2a	bone morphogenetic protein 2a	0.027
gabra1	gamma-aminobutyric acid (GABA) A receptor, alpha 1	0.027
jag1b	jagged 1b	0.027
gdnf	glial cell derived neurotrophic factor	0.026
gbx2	gastrulation brain homeo box 2	0.026
bmper	BMP binding endothelial regulator	0.026
dlx3b	distal-less homeobox gene 3b	0.026
nkx2.7	NK2 transcription factor related 7	0.026
hlxb9la	homeo box HB9 like a	0.026
hoxa9a	homeo box A9a	0.026
chga	chromogranin A	0.025
sox9b	SRY-box containing gene 9b	0.025
shhb	sonic hedgehog b	0.025
dld	deltaD	0.025
barhl1.2	BarH-like 1.2	0.025
crb2a	crumbs homolog 2a	0.024
hoxa13b	homeo box A13b	0.023
egr1	early growth response 1	0.023
nkx2.3	NK2 transcription factor related 3	0.023
otpb	orthopedia homolog b	0.023
cdh23	cadherin-like 23	0.022
hoxb6a	homeo box B6a	0.022
gc3	guanylyl cyclase 3	0.022
hhip	hedgehog interacting protein	0.022
six4a	sine oculis homeobox homolog 4a	0.021
barx1	BarH-like homeobox 1	0.021
fzd8a	frizzled homolog 8a	0.021
six3a	sine oculis homeobox homolog 3a	0.021
bmp4	bone morphogenetic protein 4	0.020
hoxb8b	homeo box B8b	0.020
hoxb5a	homeo box B5a	0.020
efnb2a	ephrin B2a	0.019
cyp26b1	cytochrome P450, family 26, subfamily b, polypeptide 1	0.019
ropn1l	ropporin 1-like	0.019
rx3	retinal homeobox gene 3	0.019
tnc	tenascin C	0.019
hoxa3a	homeo box A3a	0.019
jag2	jagged 2	0.019
msxd	muscle segment homeobox D	0.019
dlb	deltaB	0.019
pitx3	paired-like homeodomain transcription factor 3	0.018
myca	myelocytomatosis oncogene a	0.018
hoxb2a	homeo box B2a	0.018
twist3	twist3	0.018	Zebrafish
igfbp3	insulin-like growth factor binding protein 3	0.018
chrna6	cholinergic receptor, nicotinic, alpha 6	0.018
edn1	endothelin 1	0.018
spaw	southpaw	0.018
pvalb7	parvalbumin 7	0.018
nr2e1	nuclear receptor subfamily 2, group E, member 1	0.018
hoxa4a	homeo box A4a	0.018
aanat2	arylalkylamine N-acetyltransferase	0.017
lhx1a	LIM homeobox 1a	0.017
tbx20	T-box 20	0.017
neurod6a	neurogenic differentiation 6a	0.016
pitx2	paired-like homeodomain transcription factor 2	0.016
hoxa9b	homeo box A9b	0.016
dmbx1a	diencephalon/mesencephalon homeobox 1a	0.016
nkx2.1b	NK2 homeobox 1b	0.016
clrn1	clarin 1	0.015
nog3	noggin 3	0.015
epb4.1l4	erythrocyte protein band 4.1-like 4	0.015
meis4.1a	myeloid ecotropic viral integration site 4.1a	0.015
vsx1	visual system homeobox 1 homolog, chx10-like	0.015
kcnh2	potassium voltage-gated channel, subfamily H (eag-related), member 2	0.015
lamc1	laminin, gamma 1	0.015
tie2	endothelium-specific receptor tyrosine kinase 2	0.014
hmx4	H6 family homeobox 4	0.014
flt4	fms-related tyrosine kinase 4	0.014
hoxd10a	homeo box D10a	0.014
st8sia4	ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4	0.014
LOC100007758	novel protein similar to vertebrate SLIT and NTRK-like family, member 3 (SLITRK3)	0.014
tlx2	T-cell leukemia, homeobox 2	0.014
atoh7	atonal homolog 7	0.014	Zebrafish
olfm2	olfactomedin 2	0.014
ek1	eph-like kinase 1	0.014
fzd9b	frizzled homolog 9b	0.014
erg	v-ets erythroblastosis virus E26 oncogene like (avian)	0.013
pax7a	paired box gene 7a	0.013
gata2a	GATA-binding protein 2a	0.013
olig3	oligodendrocyte transcription factor 3	0.013
osr2	odd-skipped related 2 (Drosophila)	0.013
LOC100334210	growth/differentiation factor 5-like	0.013
myo7aa	myosin VIIAa	0.013
her2	hairy-related 2	0.013
dlx4b	distal-less homeobox gene 4b	0.013
rbfox1l	RNA binding protein, fox-1 homolog (C. elegans) 1-like	0.013
mab21l1	mab-21-like 1	0.013
gabbr1a	gamma-aminobutyric acid (GABA) B receptor, 1a	0.013
si:ch211-195h23.3	si:ch211-195h23.3	0.013
olig2	oligodendrocyte lineage transcription factor 2	0.013
otx2	orthodenticle homolog 2	0.012
sim2	single-minded homolog 2 (Drosophila)	0.012
pax2b	paired box gene 2b	0.012
slc17a6b	solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 6b	0.012
nr5a2	nuclear receptor subfamily 5, group A, member 2	0.012
cep70	centrosomal protein 70	0.012
ncs1a	neuronal calcium sensor 1a	0.012
zgc:103750	zgc:103750	0.012
mpz	myelin protein zero	0.012
cpox	coproporphyrinogen oxidase	0.012
tbx5b	T-box 5b	0.012
six4b	sine oculis homeobox homolog 4b	0.012
fgf24	fibroblast growth factor 24	0.012
tmem88a	transmembrane protein 88 a	0.012
fstl1a	follistatin-like 1a	0.012
hoxa10b	homeo box A10b	0.012
six3b	sine oculis homeobox homolog 3b	0.012
pax3a	paired box gene 3a	0.012
cryba4	crystallin, beta A4	0.011
chrna7	cholinergic receptor, nicotinic, alpha polypeptide 7	0.011
cbfb	core-binding factor, beta subunit	0.011
nr2e3	nuclear receptor subfamily 2, group E, member 3	0.011
dbx1a	developing brain homeobox 1a	0.011
twist1a	twist1a	0.011	Zebrafish
shha	sonic hedgehog a	0.011
ets1a	v-ets erythroblastosis virus E26 oncogene homolog 1a	0.011
cxcr4b	chemokine (C-X-C motif), receptor 4b	0.011
crx	cone-rod homeobox	0.011
ins	preproinsulin	0.011
cdh5	cadherin 5	0.011
myh6	myosin, heavy polypeptide 6, cardiac muscle, alpha	0.011
col8a1a	collagen, type VIII, alpha 1a	0.011
lect1	leukocyte cell derived chemotaxin 1	0.011
epb41l5	erythrocyte membrane protein band 4.1 like 5	0.011
nphs2	nephrosis 2, idiopathic, steroid-resistant (podocin)	0.011
efna5a	ephrin A5a	0.011
bmp2b	bone morphogenetic protein 2b	0.011
hspa5	heat shock protein 5	0.011
pcdh10b	protocadherin 10b	0.011
ift88	intraflagellar transport 88 homolog	0.011
stil	TAL1 (SCL) interrupting locus	0.011
hoxc1a	homeo box C1a	0.011
hoxb6b	homeo box B6b	0.011
rab11fip4a	RAB11 family interacting protein 4 (class II) a	0.010
prom1b	prominin 1 b	0.010
ctbp2l	C-terminal binding protein 2, like	0.010
bmp7b	bone morphogenetic protein 7b	0.010
dlx5a	distal-less homeobox gene 5a	0.010
zgc:110784	zgc:110784	0.010
tyr	tyrosinase	0.010
ptch2	patched 2	0.010
gli1	GLI-Kruppel family member 1	0.010
emx3	empty spiracles homeobox 3	0.010
pax9	paired box gene 9	0.010