IMP

Process View

Mus musculus

12 genes annotated in mouse

metanephric renal vesicle morphogenesis

The process in which the anatomical structures of the metanephric renal vesicle are generated and organized. The renal vesicle is the primordial structure of the metanephric nephron epithelium, and is formed by the condensation of mesenchymal cells.

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Known genes in the process in mouse Include functional analogs

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Gene Predictions

Click on a gene's description to view its network relationships with genes known to be involved in "metanephric renal vesicle morphogenesis"

Show only novel predictions Show only unknown genes Highlight genes with functional analogs involved in "metanephric renal vesicle morphogenesis" (in gray)

Name	Description	Probability	Func Analog Organism
Shh	sonic hedgehog	1.000
Fgf8	fibroblast growth factor 8	0.999
Pax2	paired box gene 2	0.998
Gli3	GLI-Kruppel family member GLI3	0.998
Lhx1	LIM homeobox protein 1	0.997
Fgfr2	fibroblast growth factor receptor 2	0.995
Otx2	orthodenticle homolog 2 (Drosophila)	0.991
Foxc1	forkhead box C1	0.988
Pitx2	paired-like homeodomain transcription factor 2	0.986
Rarg	retinoic acid receptor, gamma	0.976
Tbx1	T-box 1	0.963
Six1	sine oculis-related homeobox 1 homolog (Drosophila)	0.950	Mouse
Emx2	empty spiracles homolog 2 (Drosophila)	0.948
Pax3	paired box gene 3	0.935
Msx1	homeobox, msh-like 1	0.929
Foxc2	forkhead box C2	0.908
Tcfap2a	transcription factor AP-2, alpha	0.896
Sall4	sal-like 4 (Drosophila)	0.892	Mouse
Wnt4	wingless-related MMTV integration site 4	0.836	Mouse
Eya1	eyes absent 1 homolog (Drosophila)	0.835
Hoxd11	homeobox D11	0.835
Pax6	paired box gene 6	0.823
Fgfr1	fibroblast growth factor receptor 1	0.814
Hand1	heart and neural crest derivatives expressed transcript 1	0.804
Wnt3a	wingless-related MMTV integration site 3A	0.773	Mouse
Hoxa1	homeobox A1	0.740
Bmp7	bone morphogenetic protein 7	0.712
Otx1	orthodenticle homolog 1 (Drosophila)	0.689
Nog	noggin	0.666
Sox9	SRY-box containing gene 9	0.664
Dlx5	distal-less homeobox 5	0.632
Gbx2	gastrulation brain homeobox 2	0.613
Wt1	Wilms tumor 1 homolog	0.611
Fgf3	fibroblast growth factor 3	0.610
Msx2	homeobox, msh-like 2	0.607
Dkk1	dickkopf homolog 1 (Xenopus laevis)	0.604
Pax8	paired box gene 8	0.603
Gdnf	glial cell line derived neurotrophic factor	0.603
Prrx2	paired related homeobox 2	0.595
Hoxa3	homeobox A3	0.539
Rarb	retinoic acid receptor, beta	0.493
Gli2	GLI-Kruppel family member GLI2	0.461
Hand2	heart and neural crest derivatives expressed transcript 2	0.460
Lhx3	LIM homeobox protein 3	0.435	Mouse
Smo	smoothened homolog (Drosophila)	0.422
Hoxd13	homeobox D13	0.417
Hoxa11	homeobox A11	0.404
Aldh1a2	aldehyde dehydrogenase family 1, subfamily A2	0.403
Twist2	twist homolog 2 (Drosophila)	0.390
Sox2	SRY-box containing gene 2	0.386
Fgf10	fibroblast growth factor 10	0.378
Ror2	receptor tyrosine kinase-like orphan receptor 2	0.373
En1	engrailed 1	0.371
Hoxa2	homeobox A2	0.366
Sall3	sal-like 3 (Drosophila)	0.315	Mouse
T	brachyury	0.296
Nodal	nodal	0.284
Hmx3	H6 homeobox 3	0.274
Sall1	sal-like 1 (Drosophila)	0.268
Tbx3	T-box 3	0.267
Nr5a1	nuclear receptor subfamily 5, group A, member 1	0.263
Rara	retinoic acid receptor, alpha	0.258
Nkx2-5	NK2 transcription factor related, locus 5 (Drosophila)	0.247
Chrd	chordin	0.237
Lef1	lymphoid enhancer binding factor 1	0.220
Lmx1b	LIM homeobox transcription factor 1 beta	0.214	Mouse
Emx1	empty spiracles homolog 1 (Drosophila)	0.207
Hoxd3	homeobox D3	0.199
Bmp4	bone morphogenetic protein 4	0.194	Human
Lmx1a	LIM homeobox transcription factor 1 alpha	0.189	Mouse
Crlf1	cytokine receptor-like factor 1	0.187
Mesp1	mesoderm posterior 1	0.184
Bnc1	basonuclin 1	0.175
Pou3f3	POU domain, class 3, transcription factor 3	0.168
Wnt10b	wingless related MMTV integration site 10b	0.164	Mouse
Pitx1	paired-like homeodomain transcription factor 1	0.158
Ptk7	PTK7 protein tyrosine kinase 7	0.157
Fzd2	frizzled homolog 2 (Drosophila)	0.156
Wnt1	wingless-related MMTV integration site 1	0.155	Mouse
Hes1	hairy and enhancer of split 1 (Drosophila)	0.152
Hoxa4	homeobox A4	0.150
Gsc	goosecoid homeobox	0.150
Neurog1	neurogenin 1	0.146
Prrx1	paired related homeobox 1	0.143
Hoxd9	homeobox D9	0.143
Tbx2	T-box 2	0.140
Vax1	ventral anterior homeobox containing gene 1	0.135
Nanog	Nanog homeobox	0.134
Ret	ret proto-oncogene	0.134
Alx4	aristaless-like homeobox 4	0.130
Hoxb6	homeobox B6	0.130
Tcfap2c	transcription factor AP-2, gamma	0.126
Adra2b	adrenergic receptor, alpha 2b	0.124
Hoxa10	homeobox A10	0.120
Pou5f1	POU domain, class 5, transcription factor 1	0.105
Nr0b1	nuclear receptor subfamily 0, group B, member 1	0.102
Hes5	hairy and enhancer of split 5 (Drosophila)	0.102
Hoxc5	homeobox C5	0.100
Sim2	single-minded homolog 2 (Drosophila)	0.095
Rxra	retinoid X receptor alpha	0.092
Lhx9	LIM homeobox protein 9	0.087	Mouse
Uncx	UNC homeobox	0.086
Esrrb	estrogen related receptor, beta	0.085
Hoxa13	homeobox A13	0.084
Six3	sine oculis-related homeobox 3 homolog (Drosophila)	0.080	Mouse
Hoxb3	homeobox B3	0.079
Ntf3	neurotrophin 3	0.077
Lama5	laminin, alpha 5	0.075
Gja5	gap junction protein, alpha 5	0.074
Foxg1	forkhead box G1	0.074
Ednra	endothelin receptor type A	0.072
Gata4	GATA binding protein 4	0.071
Fgf18	fibroblast growth factor 18	0.071
Foxd2	forkhead box D2	0.070
Alx3	aristaless-like homeobox 3	0.067
Bmper	BMP-binding endothelial regulator	0.065
Gata3	GATA binding protein 3	0.065
Wnt9a	wingless-type MMTV integration site 9A	0.063	Mouse
Pou3f1	POU domain, class 3, transcription factor 1	0.062
Fgf15	fibroblast growth factor 15	0.062
Sox11	SRY-box containing gene 11	0.061
Hoxc8	homeobox C8	0.057
Nkx1-2	NK1 transcription factor related, locus 2 (Drosophila)	0.057
Hoxd4	homeobox D4	0.057
Cyp26a1	cytochrome P450, family 26, subfamily a, polypeptide 1	0.056
Psen1	presenilin 1	0.056
Bmpr1b	bone morphogenetic protein receptor, type 1B	0.056
Sox1	SRY-box containing gene 1	0.055
Zic2	zinc finger protein of the cerebellum 2	0.055
Tbx15	T-box 15	0.052
Pbx1	pre B-cell leukemia transcription factor 1	0.052
Ascl1	achaete-scute complex homolog 1 (Drosophila)	0.052
Il11	interleukin 11	0.051
Sema3b	sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3B	0.050
Sox3	SRY-box containing gene 3	0.049
Gpr50	G-protein-coupled receptor 50	0.048
Igdcc3	immunoglobulin superfamily, DCC subclass, member 3	0.048
Tcfcp2l1	transcription factor CP2-like 1	0.047
Hmx1	H6 homeobox 1	0.047
Pax9	paired box gene 9	0.046	Mouse
Nrtn	neurturin	0.046	Mouse
Dlx6	distal-less homeobox 6	0.046
Gfra1	glial cell line derived neurotrophic factor family receptor alpha 1	0.045
Osr1	odd-skipped related 1 (Drosophila)	0.045
Col22a1	collagen, type XXII, alpha 1	0.045
Prop1	paired like homeodomain factor 1	0.044
Hoxb7	homeobox B7	0.044
Vegfa	vascular endothelial growth factor A	0.044
Nkx6-1	NK6 homeobox 1	0.043
Otog	otogelin	0.042
Wnt5b	wingless-related MMTV integration site 5B	0.042	Mouse
Six2	sine oculis-related homeobox 2 homolog (Drosophila)	0.042
Six6	sine oculis-related homeobox 6 homolog (Drosophila)	0.041	Mouse
Fzd8	frizzled homolog 8 (Drosophila)	0.041
Ptpn14	protein tyrosine phosphatase, non-receptor type 14	0.040
Cdx1	caudal type homeobox 1	0.040
Smad6	MAD homolog 6 (Drosophila)	0.039
Hoxa7	homeobox A7	0.039
Glra1	glycine receptor, alpha 1 subunit	0.038
Hoxc6	homeobox C6	0.037
Pcsk5	proprotein convertase subtilisin/kexin type 5	0.037
Rspo2	R-spondin 2 homolog (Xenopus laevis)	0.036
Isl1	ISL1 transcription factor, LIM/homeodomain	0.036	Mouse
Nos3	nitric oxide synthase 3, endothelial cell	0.036
H1fx	H1 histone family, member X	0.036
Gpr27	G protein-coupled receptor 27	0.035
Hoxb4	homeobox B4	0.034
Hoxd12	homeobox D12	0.033
Esr1	estrogen receptor 1 (alpha)	0.033
Wnt9b	wingless-type MMTV integration site 9B	0.033
Foxf1a	forkhead box F1a	0.033
Snai1	snail homolog 1 (Drosophila)	0.032
Hoxd10	homeobox D10	0.032
Col2a1	collagen, type II, alpha 1	0.031
Mycn	v-myc myelocytomatosis viral related oncogene, neuroblastoma derived (avian)	0.031
Pax1	paired box gene 1	0.031	Mouse
BC024139	cDNA sequence BC024139	0.031
Tlx3	T-cell leukemia, homeobox 3	0.031
Col4a3	collagen, type IV, alpha 3	0.030
Zic3	zinc finger protein of the cerebellum 3	0.030
Twist1	twist homolog 1 (Drosophila)	0.029
Hoxb5	homeobox B5	0.029
Foxd1	forkhead box D1	0.029
Barx1	BarH-like homeobox 1	0.029
Six4	sine oculis-related homeobox 4 homolog (Drosophila)	0.028	Mouse
Dab1	disabled homolog 1 (Drosophila)	0.028
Cldn6	claudin 6	0.028
Ephb2	Eph receptor B2	0.028
Hsd11b2	hydroxysteroid 11-beta dehydrogenase 2	0.028
Artn	artemin	0.028	Mouse
Emid2	EMI domain containing 2	0.027
En2	engrailed 2	0.027
Hoxa9	homeobox A9	0.027
Tcf15	transcription factor 15	0.026
Pou3f4	POU domain, class 3, transcription factor 4	0.026
Wnt10a	wingless related MMTV integration site 10a	0.025
Pitx3	paired-like homeodomain transcription factor 3	0.025
Cpz	carboxypeptidase Z	0.025
Fzd10	frizzled homolog 10 (Drosophila)	0.025
Foxn1	forkhead box N1	0.025
Sox7	SRY-box containing gene 7	0.025
Acvr1	activin A receptor, type 1	0.024
Hoxa5	homeobox A5	0.024
Fgf5	fibroblast growth factor 5	0.024
Onecut1	one cut domain, family member 1	0.023
Fgf4	fibroblast growth factor 4	0.023
Fgfr3	fibroblast growth factor receptor 3	0.023
Clcnka	chloride channel Ka	0.023
Eya4	eyes absent 4 homolog (Drosophila)	0.023
Fgf17	fibroblast growth factor 17	0.023
Gli1	GLI-Kruppel family member GLI1	0.023
Dmbx1	diencephalon/mesencephalon homeobox 1	0.022
Efna4	ephrin A4	0.022
Foxi1	forkhead box I1	0.022
Dlx1	distal-less homeobox 1	0.022
Hoxb13	homeobox B13	0.021
Hoxb1	homeobox B1	0.021
Barx2	BarH-like homeobox 2	0.021
Sim1	single-minded homolog 1 (Drosophila)	0.021
Hbb-bh1	hemoglobin Z, beta-like embryonic chain	0.021
Gdf5	growth differentiation factor 5	0.021
Foxn4	forkhead box N4	0.021
Wnt6	wingless-related MMTV integration site 6	0.021	Mouse
Pkp1	plakophilin 1	0.021
Wnt11	wingless-related MMTV integration site 11	0.021	Mouse
Adra2a	adrenergic receptor, alpha 2a	0.021
Kl	klotho	0.021
Adamts7	a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 7	0.021
Lrp2	low density lipoprotein receptor-related protein 2	0.020
Insm1	insulinoma-associated 1	0.020
Wnt2b	wingless related MMTV integration site 2b	0.020	Mouse
Trp63	transformation related protein 63	0.020
Grem1	gremlin 1	0.020
Ror1	receptor tyrosine kinase-like orphan receptor 1	0.020
Efna2	ephrin A2	0.020
Hoxb9	homeobox B9	0.020
Foxh1	forkhead box H1	0.020
Foxb1	forkhead box B1	0.019
Shox2	short stature homeobox 2	0.019
Meox2	mesenchyme homeobox 2	0.019
Rax	retina and anterior neural fold homeobox	0.019
Zfp503	zinc finger protein 503	0.019
Adrb1	adrenergic receptor, beta 1	0.019
Acan	aggrecan	0.019
Foxb2	forkhead box B2	0.019
Tgfb2	transforming growth factor, beta 2	0.019
Mmp15	matrix metallopeptidase 15	0.018
Slc32a1	solute carrier family 32 (GABA vesicular transporter), member 1	0.018
Sema5b	sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5B	0.018
Nkx2-3	NK2 transcription factor related, locus 3 (Drosophila)	0.018
Sox4	SRY-box containing gene 4	0.018
Ptger1	prostaglandin E receptor 1 (subtype EP1)	0.018
Cdkn2a	cyclin-dependent kinase inhibitor 2A	0.018
Irx1	Iroquois related homeobox 1 (Drosophila)	0.018
Col13a1	collagen, type XIII, alpha 1	0.018
Hoxc4	homeobox C4	0.018
Chd7	chromodomain helicase DNA binding protein 7	0.017
Pou3f2	POU domain, class 3, transcription factor 2	0.017
Hoxd8	homeobox D8	0.017
Tulp1	tubby like protein 1	0.017
Dlx2	distal-less homeobox 2	0.017
Tnfrsf8	tumor necrosis factor receptor superfamily, member 8	0.017
Lhb	luteinizing hormone beta	0.017
Zfp771	zinc finger protein 771	0.017
Amhr2	anti-Mullerian hormone type 2 receptor	0.016
Gdf11	growth differentiation factor 11	0.016
Lhx5	LIM homeobox protein 5	0.016	Mouse
Irx5	Iroquois related homeobox 5 (Drosophila)	0.016
Foxf2	forkhead box F2	0.016
Wnt3	wingless-related MMTV integration site 3	0.016	Mouse
Foxa2	forkhead box A2	0.016
Mip	major intrinsic protein of eye lens fiber	0.016
Trpm1	transient receptor potential cation channel, subfamily M, member 1	0.016
Hoxb2	homeobox B2	0.016
Htr4	5 hydroxytryptamine (serotonin) receptor 4	0.016
Ier5l	immediate early response 5-like	0.016
Dact1	dapper homolog 1, antagonist of beta-catenin (xenopus)	0.016
Bik	BCL2-interacting killer	0.015
Cer1	cerberus 1 homolog (Xenopus laevis)	0.015	Mouse
Oprd1	opioid receptor, delta 1	0.015
Ptpn11	protein tyrosine phosphatase, non-receptor type 11	0.015
Lhx4	LIM homeobox protein 4	0.015	Mouse
Krt15	keratin 15	0.015
Dlx3	distal-less homeobox 3	0.015
Lrp6	low density lipoprotein receptor-related protein 6	0.015
Foxe3	forkhead box E3	0.015
Csf3	colony stimulating factor 3 (granulocyte)	0.015
Hes2	hairy and enhancer of split 2 (Drosophila)	0.015
Angpt4	angiopoietin 4	0.015
Pdgfra	platelet derived growth factor receptor, alpha polypeptide	0.014
Zp1	zona pellucida glycoprotein 1	0.014
Pou4f2	POU domain, class 4, transcription factor 2	0.014
Msx3	homeobox, msh-like 3	0.014
Cdh3	cadherin 3	0.014
Efna5	ephrin A5	0.014
Gja3	gap junction protein, alpha 3	0.014
Gata6	GATA binding protein 6	0.014
Gjb4	gap junction protein, beta 4	0.014
Socs1	suppressor of cytokine signaling 1	0.014
Slc16a8	solute carrier family 16 (monocarboxylic acid transporters), member 8	0.014
Evx1	even skipped homeotic gene 1 homolog	0.014
Irx3	Iroquois related homeobox 3 (Drosophila)	0.014
Rhbdl3	rhomboid, veinlet-like 3 (Drosophila)	0.014
Ngfr	nerve growth factor receptor (TNFR superfamily, member 16)	0.014
Rtkn	rhotekin	0.014
Pax7	paired box gene 7	0.013
Rsph6a	radial spoke head 6 homolog A (Chlamydomonas)	0.013
Hoxc9	homeobox C9	0.013
Matn3	matrilin 3	0.013
Matn4	matrilin 4	0.013
Papln	papilin, proteoglycan-like sulfated glycoprotein	0.013
Pou4f3	POU domain, class 4, transcription factor 3	0.013
Myog	myogenin	0.013
Csf2	colony stimulating factor 2 (granulocyte-macrophage)	0.013
Slc25a29	solute carrier family 25 (mitochondrial carrier, palmitoylcarnitine transporter), member 29	0.013
Itga3	integrin alpha 3	0.013
Nr2e1	nuclear receptor subfamily 2, group E, member 1	0.013
Mybpc3	myosin binding protein C, cardiac	0.013
Nkx2-1	NK2 homeobox 1	0.013
Cd151	CD151 antigen	0.013
Foxl2	forkhead box L2	0.013
Tbx5	T-box 5	0.013
Cdh16	cadherin 16	0.013
Cdc42ep1	CDC42 effector protein (Rho GTPase binding) 1	0.013
Fzd4	frizzled homolog 4 (Drosophila)	0.013
Gata2	GATA binding protein 2	0.013
Hs6st3	heparan sulfate 6-O-sulfotransferase 3	0.012
Vangl2	vang-like 2 (van gogh, Drosophila)	0.012
Hoxd1	homeobox D1	0.012
Bmp2	bone morphogenetic protein 2	0.012
Scube3	signal peptide, CUB domain, EGF-like 3	0.012
4931408A02Rik	RIKEN cDNA 4931408A02 gene	0.012
Efnb2	ephrin B2	0.012
3110079O15Rik	RIKEN cDNA 3110079O15 gene	0.012
Atoh8	atonal homolog 8 (Drosophila)	0.012
Neurog2	neurogenin 2	0.012
Zfp703	zinc finger protein 703	0.012
Chrng	cholinergic receptor, nicotinic, gamma polypeptide	0.012
Pvrl1	poliovirus receptor-related 1	0.012
Lefty1	left right determination factor 1	0.012
Pthlh	parathyroid hormone-like peptide	0.012
Dlx4	distal-less homeobox 4	0.011
Tal2	T-cell acute lymphocytic leukemia 2	0.011
Nobox	NOBOX oogenesis homeobox	0.011
Irx4	Iroquois related homeobox 4 (Drosophila)	0.011
Wnt5a	wingless-related MMTV integration site 5A	0.011	Mouse
Krt86	keratin 86	0.011
Tcf21	transcription factor 21	0.011
Dusp9	dual specificity phosphatase 9	0.011
Gjb5	gap junction protein, beta 5	0.011
Ebf4	early B-cell factor 4	0.011
Omp	olfactory marker protein	0.011
Npas1	neuronal PAS domain protein 1	0.011
Bcl2	B-cell leukemia/lymphoma 2	0.011
Foxa1	forkhead box A1	0.011
Aes	amino-terminal enhancer of split	0.011
Ptrf	polymerase I and transcript release factor	0.011
Pdha2	pyruvate dehydrogenase E1 alpha 2	0.011
Prx	periaxin	0.011
Myl2	myosin, light polypeptide 2, regulatory, cardiac, slow	0.011
Irx2	Iroquois related homeobox 2 (Drosophila)	0.010
Gas1	growth arrest specific 1	0.010
Phox2b	paired-like homeobox 2b	0.010
Bmp15	bone morphogenetic protein 15	0.010
Lama1	laminin, alpha 1	0.010
Gcm2	glial cells missing homolog 2 (Drosophila)	0.010
Fgf21	fibroblast growth factor 21	0.010
Jag1	jagged 1	0.010
Lgals7	lectin, galactose binding, soluble 7	0.010
Ephb3	Eph receptor B3	0.010
Porcn	porcupine homolog (Drosophila)	0.010
Stra8	stimulated by retinoic acid gene 8	0.010
Pcdh12	protocadherin 12	0.010