Process View
The modification of histone H3 by addition of a methyl group to lysine at position 9 of the histone.

In addition to gene-name show these genes:
Click on a gene's description to view its network relationships with genes known to be involved in "histone h3 k9 methylation"
| Name | Description | Probability | Func Analog Organism | |
|---|---|---|---|---|
| Ezh2 | enhancer of zeste homolog 2 (Drosophila) | 1.000 | Fly | |
| Jarid2 | jumonji, AT rich interactive domain 2 | 1.000 | ||
| Suz12 | suppressor of zeste 12 homolog (Drosophila) | 1.000 | ||
| Mtf2 | metal response element binding transcription factor 2 | 0.999 | ||
| Dnmt3a | DNA methyltransferase 3A | 0.987 | ||
| Eed | embryonic ectoderm development | 0.975 | ||
| Rbbp4 | retinoblastoma binding protein 4 | 0.971 | ||
| Kdm2b | lysine (K)-specific demethylase 2B | 0.961 | ||
| Stk38 | serine/threonine kinase 38 | 0.909 | ||
| Sin3a | transcriptional regulator, SIN3A (yeast) | 0.804 | ||
| Arid4a | AT rich interactive domain 4A (RBP1-like) | 0.778 | ||
| Aebp2 | AE binding protein 2 | 0.754 | ||
| Trim24 | tripartite motif-containing 24 | 0.682 | ||
| Setx | senataxin | 0.666 | ||
| Trim28 | tripartite motif-containing 28 | 0.458 | ||
| Hdac1 | histone deacetylase 1 | 0.375 | ||
| Msx1 | homeobox, msh-like 1 | 0.373 | ||
| Morc3 | microrchidia 3 | 0.357 | ||
| Ezh1 | enhancer of zeste homolog 1 (Drosophila) | 0.285 | Fly | |
| Arid4b | AT rich interactive domain 4B (RBP1-like) | 0.274 | ||
| Zfp292 | zinc finger protein 292 | 0.247 | ||
| Lef1 | lymphoid enhancer binding factor 1 | 0.231 | ||
| Brca2 | breast cancer 2 | 0.229 | ||
| Gfi1b | growth factor independent 1B | 0.215 | ||
| Brca1 | breast cancer 1 | 0.185 | ||
| Akap9 | A kinase (PRKA) anchor protein (yotiao) 9 | 0.168 | ||
| Cbx1 | chromobox homolog 1 (Drosophila HP1 beta) | 0.140 | Fly | |
| Hells | helicase, lymphoid specific | 0.139 | ||
| Rbbp7 | retinoblastoma binding protein 7 | 0.136 | ||
| Kdm5a | lysine (K)-specific demethylase 5A | 0.131 | ||
| Pias1 | protein inhibitor of activated STAT 1 | 0.122 | ||
| Ncoa6 | nuclear receptor coactivator 6 | 0.114 | ||
| Rsf1 | remodeling and spacing factor 1 | 0.109 | ||
| Rnf2 | ring finger protein 2 | 0.105 | ||
| Rbm5 | RNA binding motif protein 5 | 0.097 | ||
| Dnmt1 | DNA methyltransferase (cytosine-5) 1 | 0.095 | Human Zebrafish | |
| Bcor | BCL6 interacting corepressor | 0.090 | ||
| Erg | avian erythroblastosis virus E-26 (v-ets) oncogene related | 0.088 | ||
| Tnrc6b | trinucleotide repeat containing 6b | 0.087 | ||
| Bptf | bromodomain PHD finger transcription factor | 0.086 | ||
| Thoc2 | THO complex 2 | 0.085 | ||
| Gata1 | GATA binding protein 1 | 0.084 | ||
| Nipbl | Nipped-B homolog (Drosophila) | 0.080 | ||
| Cbx5 | chromobox homolog 5 (Drosophila HP1a) | 0.076 | Fly | |
| Dnmt3b | DNA methyltransferase 3B | 0.071 | Human Zebrafish | |
| Atrx | alpha thalassemia/mental retardation syndrome X-linked homolog (human) | 0.069 | ||
| Mga | MAX gene associated | 0.068 | ||
| Mynn | myoneurin | 0.063 | ||
| Gata3 | GATA binding protein 3 | 0.060 | ||
| Crebbp | CREB binding protein | 0.060 | ||
| Mbtd1 | mbt domain containing 1 | 0.057 | ||
| Pax2 | paired box gene 2 | 0.056 | Mouse | |
| Brd4 | bromodomain containing 4 | 0.055 | ||
| Mll3 | myeloid/lymphoid or mixed-lineage leukemia 3 | 0.054 | Fly | |
| Dnmt3l | DNA (cytosine-5-)-methyltransferase 3-like | 0.054 | ||
| Chd2 | chromodomain helicase DNA binding protein 2 | 0.053 | ||
| Pum1 | pumilio 1 (Drosophila) | 0.053 | ||
| H3f3a | H3 histone, family 3A | 0.053 | ||
| Dtl | denticleless homolog (Drosophila) | 0.051 | ||
| Trim33 | tripartite motif-containing 33 | 0.047 | ||
| Donson | downstream neighbor of SON | 0.046 | ||
| Chaf1a | chromatin assembly factor 1, subunit A (p150) | 0.046 | ||
| Dhx15 | DEAH (Asp-Glu-Ala-His) box polypeptide 15 | 0.045 | ||
| Phip | pleckstrin homology domain interacting protein | 0.044 | ||
| Zfp445 | zinc finger protein 445 | 0.043 | ||
| Pou5f1 | POU domain, class 5, transcription factor 1 | 0.042 | ||
| Pcgf6 | polycomb group ring finger 6 | 0.040 | ||
| Ankhd1 | ankyrin repeat and KH domain containing 1 | 0.040 | ||
| Dmtf1 | cyclin D binding myb-like transcription factor 1 | 0.038 | ||
| Creb1 | cAMP responsive element binding protein 1 | 0.036 | ||
| Ddx6 | DEAD (Asp-Glu-Ala-Asp) box polypeptide 6 | 0.036 | ||
| Rlf | rearranged L-myc fusion sequence | 0.035 | ||
| Nanog | Nanog homeobox | 0.035 | ||
| Pou2f1 | POU domain, class 2, transcription factor 1 | 0.034 | ||
| Paxip1 | PAX interacting (with transcription-activation domain) protein 1 | 0.034 | ||
| Kdm5b | lysine (K)-specific demethylase 5B | 0.034 | ||
| Atm | ataxia telangiectasia mutated homolog (human) | 0.032 | ||
| Mll1 | myeloid/lymphoid or mixed-lineage leukemia 1 | 0.032 | ||
| Hist1h3g | histone cluster 1, H3g | 0.032 | ||
| Terf1 | telomeric repeat binding factor 1 | 0.031 | ||
| Smg1 | SMG1 homolog, phosphatidylinositol 3-kinase-related kinase (C. elegans) | 0.031 | ||
| Rapgef6 | Rap guanine nucleotide exchange factor (GEF) 6 | 0.030 | ||
| Ilf3 | interleukin enhancer binding factor 3 | 0.029 | ||
| Hand1 | heart and neural crest derivatives expressed transcript 1 | 0.029 | ||
| Zkscan17 | zinc finger with KRAB and SCAN domains 17 | 0.028 | ||
| Trim35 | tripartite motif-containing 35 | 0.028 | ||
| Sp4 | trans-acting transcription factor 4 | 0.027 | ||
| L3mbtl2 | l(3)mbt-like 2 (Drosophila) | 0.027 | ||
| Ankrd12 | ankyrin repeat domain 12 | 0.027 | ||
| Mll5 | myeloid/lymphoid or mixed-lineage leukemia 5 | 0.027 | ||
| Dsg4 | desmoglein 4 | 0.026 | ||
| Msx2 | homeobox, msh-like 2 | 0.026 | ||
| Mcm4 | minichromosome maintenance deficient 4 homolog (S. cerevisiae) | 0.025 | ||
| Klhl24 | kelch-like 24 (Drosophila) | 0.025 | ||
| Zmym2 | zinc finger, MYM-type 2 | 0.025 | ||
| Rybp | RING1 and YY1 binding protein | 0.025 | ||
| Ncoa1 | nuclear receptor coactivator 1 | 0.024 | ||
| Xrn1 | 5'-3' exoribonuclease 1 | 0.024 | ||
| Wnt9b | wingless-type MMTV integration site 9B | 0.024 | ||
| Dcaf7 | DDB1 and CUL4 associated factor 7 | 0.024 | ||
| Asxl2 | additional sex combs like 2 (Drosophila) | 0.023 | ||
| Sufu | suppressor of fused homolog (Drosophila) | 0.022 | ||
| Plekha5 | pleckstrin homology domain containing, family A member 5 | 0.022 | ||
| Gsdma3 | gasdermin A3 | 0.022 | ||
| Atf7ip | activating transcription factor 7 interacting protein | 0.022 | ||
| Pogz | pogo transposable element with ZNF domain | 0.021 | ||
| Ncapd3 | non-SMC condensin II complex, subunit D3 | 0.021 | ||
| Tcf3 | transcription factor 3 | 0.020 | ||
| Snrpe | small nuclear ribonucleoprotein E | 0.020 | ||
| Hcfc1 | host cell factor C1 | 0.020 | ||
| Blm | Bloom syndrome, RecQ helicase-like | 0.020 | ||
| 2810474O19Rik | RIKEN cDNA 2810474O19 gene | 0.020 | ||
| Lrp6 | low density lipoprotein receptor-related protein 6 | 0.020 | ||
| Rif1 | Rap1 interacting factor 1 homolog (yeast) | 0.020 | ||
| Baz2b | bromodomain adjacent to zinc finger domain, 2B | 0.020 | Mouse | |
| Epc1 | enhancer of polycomb homolog 1 (Drosophila) | 0.019 | ||
| Tbx1 | T-box 1 | 0.019 | ||
| Tcfcp2l1 | transcription factor CP2-like 1 | 0.019 | ||
| Csnk1g1 | casein kinase 1, gamma 1 | 0.019 | ||
| Hira | histone cell cycle regulation defective homolog A (S. cerevisiae) | 0.019 | ||
| Chd4 | chromodomain helicase DNA binding protein 4 | 0.019 | ||
| Zfp654 | zinc finger protein 654 | 0.018 | ||
| Kdm1a | lysine (K)-specific demethylase 1A | 0.018 | ||
| Nup155 | nucleoporin 155 | 0.018 | ||
| Hist1h1e | histone cluster 1, H1e | 0.017 | ||
| Rxra | retinoid X receptor alpha | 0.017 | ||
| Rcor2 | REST corepressor 2 | 0.017 | ||
| Arntl | aryl hydrocarbon receptor nuclear translocator-like | 0.017 | ||
| Fbxo38 | F-box protein 38 | 0.017 | ||
| Cbx2 | chromobox homolog 2 (Drosophila Pc class) | 0.016 | ||
| Vangl2 | vang-like 2 (van gogh, Drosophila) | 0.016 | ||
| Cramp1l | Crm, cramped-like (Drosophila) | 0.016 | ||
| Atxn7 | ataxin 7 | 0.016 | ||
| Myod1 | myogenic differentiation 1 | 0.016 | ||
| Myef2 | myelin basic protein expression factor 2, repressor | 0.016 | ||
| Bbx | bobby sox homolog (Drosophila) | 0.015 | ||
| Senp7 | SUMO1/sentrin specific peptidase 7 | 0.015 | ||
| Lin9 | lin-9 homolog (C. elegans) | 0.015 | ||
| Cry1 | cryptochrome 1 (photolyase-like) | 0.015 | ||
| Ldb1 | LIM domain binding 1 | 0.015 | ||
| Rttn | rotatin | 0.015 | ||
| Arid2 | AT rich interactive domain 2 (ARID, RFX-like) | 0.015 | ||
| Krt14 | keratin 14 | 0.014 | ||
| Tnpo2 | transportin 2 (importin 3, karyopherin beta 2b) | 0.014 | ||
| Alx1 | ALX homeobox 1 | 0.014 | ||
| Epo | erythropoietin | 0.014 | ||
| Upf2 | UPF2 regulator of nonsense transcripts homolog (yeast) | 0.014 | ||
| Srsf4 | serine/arginine-rich splicing factor 4 | 0.014 | ||
| Casp2 | caspase 2 | 0.013 | ||
| Prrc2c | proline-rich coiled-coil 2C | 0.013 | ||
| Kdm4c | lysine (K)-specific demethylase 4C | 0.013 | ||
| Pold3 | polymerase (DNA-directed), delta 3, accessory subunit | 0.013 | ||
| Rnf38 | ring finger protein 38 | 0.013 | ||
| Chek1 | checkpoint kinase 1 homolog (S. pombe) | 0.013 | ||
| Cnot4 | CCR4-NOT transcription complex, subunit 4 | 0.013 | ||
| Exosc8 | exosome component 8 | 0.013 | ||
| Ankrd26 | ankyrin repeat domain 26 | 0.013 | ||
| Ash1l | ash1 (absent, small, or homeotic)-like (Drosophila) | 0.013 | ||
| Sfswap | splicing factor, suppressor of white-apricot homolog (Drosophila) | 0.013 | ||
| Igl | immunoglobulin lambda chain complex | 0.013 | ||
| Mastl | microtubule associated serine/threonine kinase-like | 0.013 | ||
| Vezf1 | vascular endothelial zinc finger 1 | 0.013 | ||
| Ep400 | E1A binding protein p400 | 0.013 | ||
| Ncor1 | nuclear receptor co-repressor 1 | 0.013 | ||
| Sbno1 | sno, strawberry notch homolog 1 (Drosophila) | 0.013 | ||
| Rictor | RPTOR independent companion of MTOR, complex 2 | 0.013 | ||
| Ino80d | INO80 complex subunit D | 0.013 | ||
| Kdm6a | 4lysine (K)-specific demethylase 6A | 0.013 | ||
| Rhd | Rh blood group, D antigen | 0.012 | ||
| Zmym5 | zinc finger, MYM-type 5 | 0.012 | ||
| Zc3h13 | zinc finger CCCH type containing 13 | 0.012 | ||
| 2610039C10Rik | RIKEN cDNA 2610039C10 gene | 0.012 | ||
| Hnf1a | HNF1 homeobox A | 0.012 | ||
| Gatad2b | GATA zinc finger domain containing 2B | 0.012 | ||
| Msh2 | mutS homolog 2 (E. coli) | 0.012 | ||
| Tnrc6c | trinucleotide repeat containing 6C | 0.012 | ||
| Tex10 | testis expressed gene 10 | 0.012 | ||
| Nup160 | nucleoporin 160 | 0.012 | ||
| 2210018M11Rik | RIKEN cDNA 2210018M11 gene | 0.012 | ||
| Six4 | sine oculis-related homeobox 4 homolog (Drosophila) | 0.012 | ||
| Inpp5k | inositol polyphosphate 5-phosphatase K | 0.012 | ||
| Rbm15 | RNA binding motif protein 15 | 0.012 | ||
| Trp63 | transformation related protein 63 | 0.012 | ||
| A230046K03Rik | RIKEN cDNA A230046K03 gene | 0.012 | ||
| Esco1 | establishment of cohesion 1 homolog 1 (S. cerevisiae) | 0.012 | ||
| Mtbp | Mdm2, transformed 3T3 cell double minute p53 binding protein | 0.012 | ||
| Tet2 | tet oncogene family member 2 | 0.012 | ||
| Ccnl1 | cyclin L1 | 0.011 | ||
| Akap13 | A kinase (PRKA) anchor protein 13 | 0.011 | ||
| Dicer1 | Dicer1, Dcr-1 homolog (Drosophila) | 0.011 | ||
| Parp1 | poly (ADP-ribose) polymerase family, member 1 | 0.011 | ||
| Epc2 | enhancer of polycomb homolog 2 (Drosophila) | 0.011 | ||
| Fam193a | family with sequence similarity 193, member A | 0.011 | ||
| Wdhd1 | WD repeat and HMG-box DNA binding protein 1 | 0.011 | ||
| Sox2 | SRY-box containing gene 2 | 0.011 | ||
| Zmynd8 | zinc finger, MYND-type containing 8 | 0.011 | ||
| Msi2 | Musashi homolog 2 (Drosophila) | 0.011 | ||
| Mbd4 | methyl-CpG binding domain protein 4 | 0.011 | ||
| Mta3 | metastasis associated 3 | 0.011 | ||
| BC024479 | cDNA sequence BC024479 | 0.011 | ||
| Kdm3a | lysine (K)-specific demethylase 3A | 0.011 | ||
| Fam33a | family with sequence similarity 33, member A | 0.011 | ||
| Ddx26b | DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 26B | 0.011 | ||
| Cwf19l1 | CWF19-like 1, cell cycle control (S. pombe) | 0.011 | ||
| Myb | myeloblastosis oncogene | 0.011 | Human | |
| Mllt10 | myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10 | 0.011 | ||
| Suv39h1 | suppressor of variegation 3-9 homolog 1 (Drosophila) | 0.011 | ||
| Gigyf1 | GRB10 interacting GYF protein 1 | 0.011 | ||
| Rb1cc1 | RB1-inducible coiled-coil 1 | 0.011 | ||
| Arid1a | AT rich interactive domain 1A (SWI-like) | 0.010 | ||
| Mns1 | meiosis-specific nuclear structural protein 1 | 0.010 | ||
| Ppil4 | peptidylprolyl isomerase (cyclophilin)-like 4 | 0.010 | ||
| Ing3 | inhibitor of growth family, member 3 | 0.010 | ||
| Runx1 | runt related transcription factor 1 | 0.010 | ||
| Smek2 | SMEK homolog 2, suppressor of mek1 (Dictyostelium) | 0.010 | ||
| Srrm1 | serine/arginine repetitive matrix 1 | 0.010 | ||
| Col2a1 | collagen, type II, alpha 1 | 0.010 | ||
| Eri2 | exoribonuclease 2 | 0.010 | ||
| Nell1 | NEL-like 1 (chicken) | 0.010 |