IMP

Process View

Danio rerio

23 genes annotated in zebrafish

lateral mesoderm development

The process whose specific outcome is the progression of the lateral mesoderm over time, from its formation to the mature structure.

Loading network...

In addition to gene-name show these genes:

Known genes in the process in zebrafish Include functional analogs

Network Filters

Minimum relationship confidence:

Maximum number of genes:

Highlight known relationships in gold.

Graphical Options

Adjust edge length:

Adjust node size:

Fixed layout

Black background

Low confidence color:

Med confidence color:

High confidence color:

Hide the legend in the network

Save Options

Gene Predictions

Click on a gene's description to view its network relationships with genes known to be involved in "lateral mesoderm development"

Show only novel predictions Show only unknown genes Highlight genes with functional analogs involved in "lateral mesoderm development" (in gray)

Name	Description	Probability	Func Analog Organism
tbx1	T-box 1	0.785	Zebrafish
fgf8a	fibroblast growth factor 8 a	0.763
tbx16	T-box gene 16	0.744	Zebrafish
chd	chordin	0.744
pax2a	paired box gene 2a	0.735
wnt5b	wingless-type MMTV integration site family, member 5b	0.633
dld	deltaD	0.557
ntla	no tail a	0.472
bmp2b	bone morphogenetic protein 2b	0.424
ndr2	nodal-related 2	0.397	Zebrafish
gli2a	GLI-Kruppel family member GLI2a	0.297
atoh1b	atonal homolog 1b	0.285	Zebrafish
lft1	lefty1	0.210
eve1	even-skipped-like1	0.207
cdh2	cadherin 2, neuronal	0.180
tbx2b	T-box 2b	0.157	Zebrafish
pdlim3b	PDZ and LIM domain 3b	0.148
ccm2	cerebral cavernous malformation 2	0.132
wnt11	wingless-type MMTV integration site family, member 11	0.118
her7	hairy and enhancer of split related-7	0.113
flh	floating head	0.109
rxraa	retinoid X receptor, alpha a	0.107
gli1	GLI-Kruppel family member 1	0.105
gro1	groucho 1	0.101
tbx2a	T-box gene 2a	0.100	Zebrafish
nkx2.5	NK2 transcription factor related 5	0.095
mib	mind bomb	0.094
sox32	SRY-box containing gene 32	0.090
etv5b	ets variant 5b	0.089
her1	hairy-related 1	0.084
LOC100000687	signal peptide, CUB and EGF-like domain-containing protein 3-like	0.083
aldh1a2	aldehyde dehydrogenase 1 family, member A2	0.081
isl1	islet1	0.078
shha	sonic hedgehog a	0.078	Mouse
slc25a37	solute carrier family 25, member 37	0.077
fbn2b	fibrillin 2b	0.071
bmpr2a	bone morphogenetic protein receptor, type II a (serine/threonine kinase)	0.071	Zebrafish
spaw	southpaw	0.070
foxg1a	forkhead box G1a	0.069
neo1	neogenin 1	0.068
cdx4	caudal type homeo box transcription factor 4	0.068
fn1	fibronectin 1	0.068
raraa	retinoic acid receptor, alpha a	0.066	Zebrafish
mespb	mesoderm posterior b	0.065	Mouse
dla	deltaA	0.063	Zebrafish
epha4a	eph receptor A4a	0.060
twist1b	twist1b	0.057
mespa	mesoderm posterior a	0.057	Mouse
otpb	orthopedia homolog b	0.057
spns2	spinster homolog 2 (Drosophila)	0.056
vcanb	versican b	0.056
ripply1	ripply1	0.053
fzd10	frizzled homolog 10	0.053
gbx2	gastrulation brain homeo box 2	0.051
hmgcrb	3-hydroxy-3-methylglutaryl-Coenzyme A reductase b	0.051
lfng	lunatic fringe homolog	0.051
ptf1a	pancreas specific transcription factor, 1a	0.048	Zebrafish
bhlhe40	basic helix-loop-helix family, member e40	0.047
oep	one-eyed pinhead	0.046
nr2f5	nuclear receptor subfamily 2, group F, member 5	0.044
twist1a	twist1a	0.044	Zebrafish
lhx1a	LIM homeobox 1a	0.043
h1m	linker histone H1M	0.042
tbx24	T-box 24	0.042	Zebrafish
smad1	MAD homolog 1 (Drosophila)	0.042
eng2b	engrailed 2b	0.041
ascl1a	achaete-scute complex-like 1a (Drosophila)	0.039
mmp2	matrix metalloproteinase 2	0.039
nkd1	naked cuticle homolog 1 (Drosophila)	0.039
plcg1	phospholipase C, gamma 1	0.039
pard6gb	par-6 partitioning defective 6 homolog gamma B (C. elegans)	0.038
neurog1	neurogenin 1	0.038	Zebrafish
bmpr2b	bone morphogenetic protein receptor, type II b (serine/threonine kinase)	0.037	Zebrafish
bmp4	bone morphogenetic protein 4	0.036
sema3aa	semaphorin 3aa	0.035
gdf11	growth differentiation factor 11	0.035
myf5	myogenic factor 5	0.034
med12	mediator of RNA polymerase II transcription, subunit 12 homolog	0.034
wu:fv91b12	wu:fv91b12	0.034
dlc	deltaC	0.034	Zebrafish
rxrab	retinoid x receptor, alpha b	0.034
msgn1	mesogenin 1	0.034
gata5	GATA-binding protein 5	0.034
pax6a	paired box gene 6a	0.034
fgfr2	fibroblast growth factor receptor 2	0.033
runx1	runt-related transcription factor 1	0.033
cxcl12b	chemokine (C-X-C motif) ligand 12b (stromal cell-derived factor 1)	0.033
rxrgb	retinoid X receptor, gamma b	0.033
tnnt2a	troponin T2a, cardiac	0.033
six3b	sine oculis homeobox homolog 3b	0.032
rx3	retinal homeobox gene 3	0.032
sox17	SRY-box containing gene 17	0.032
nkx2.1a	NK2 homeobox 1a	0.031
her11	hairy-related 11	0.031
vcana	versican a	0.030
evx1	even-skipped homeobox 1	0.030
gro2	groucho 2	0.030
has2	hyaluronan synthase 2	0.030
nr1d2b	nuclear receptor subfamily 1, group D, member 2b	0.030	Zebrafish
fyna	FYN oncogene related to SRC, FGR, YES a	0.029
rarab	retinoic acid receptor, alpha b	0.028	Zebrafish
hgfa	hepatocyte growth factor a	0.028
neurod6a	neurogenic differentiation 6a	0.027
met	met proto-oncogene (hepatocyte growth factor receptor)	0.027
lrrc6	leucine rich repeat containing 6	0.027
zgc:123296	zgc:123296	0.027
bmpr1ab	bone morphogenetic protein receptor, type 1ab	0.027
foxi1	forkhead box I1	0.026
dact2	dapper homolog 2, antagonist of beta-catenin (xenopus)	0.026
msxc	muscle segment homeobox C	0.026
eomesa	eomesodermin homolog a	0.026	Zebrafish
loxl3b	lysyl oxidase-like 3b	0.026
pcdh8	protocadherin 8	0.026
notch2	notch homolog 2	0.025
kdrl	kinase insert domain receptor like	0.025
msxe	muscle segment homeobox E	0.025
foxn4	forkhead box N4	0.025
bmpr1aa	bone morphogenetic protein receptor, type 1aa	0.024	Zebrafish Mouse
otx2	orthodenticle homolog 2	0.024
myod1	myogenic differentiation 1	0.024
barhl2	BarH-like 2	0.024
mmp14a	matrix metalloproteinase 14a (membrane-inserted)	0.023
vhl	von Hippel-Lindau tumor suppressor	0.023
krit1	KRIT1, ankyrin repeat containing	0.023
fgfr4	fibroblast growth factor receptor 4	0.022	Zebrafish
smad5	MAD homolog 5 (Drosophila)	0.022
tbx6	T-box gene 6	0.022	Zebrafish
dusp6	dual specificity phosphatase 6	0.022
sox1a	SRY-box containing gene 1a	0.022
edn1	endothelin 1	0.022
mab21l2	mab-21-like 2	0.021
bmp3	bone morphogenetic protein 3	0.021
tead3a	TEA domain family member 3 a	0.021
rxrba	retinoid x receptor, beta a	0.020
cxcr4a	chemokine (C-X-C motif) receptor 4a	0.020
dlx2a	distal-less homeobox gene 2a	0.020
LOC565256	similar to Metabotropic glutamate receptor 3 precursor (mGluR3)	0.020
im:7136220	im:7136220	0.020
tgfbi	transforming growth factor, beta-induced	0.020
vent	ventral expressed homeobox	0.019
mapk1	mitogen-activated protein kinase 1	0.019
foxa2	forkhead box A2	0.019
dact1	dapper homolog 1, antagonist of beta-catenin (xenopus)	0.019
hmx1	H6 homeo box 1	0.019
lhx1b	LIM homeobox 1b	0.019
myl7	myosin, light polypeptide 7, regulatory	0.019
supt6h	suppressor of Ty 6 homolog	0.018
lamc1	laminin, gamma 1	0.018
ext2	exostoses (multiple) 2	0.018
neurod6b	neurogenic differentiation 6b	0.018	Zebrafish
mll	myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila)	0.018
satb2	SATB homeobox 2	0.018
dlg1	discs, large (Drosophila) homolog 1	0.018
atoh1c	atonal homolog 1c	0.018	Zebrafish
blf	bloody fingers	0.018
tmem2	transmembrane protein 2	0.018
atoh1a	atonal homolog 1a	0.018	Zebrafish
tp53	tumor protein p53	0.018
tfe3b	transcription factor binding to IGHM enhancer 3b	0.017
trim33	tripartite motif-containing 33	0.017
dll4	delta-like 4 (Drosophila)	0.017	Zebrafish
otx5	orthodenticle homolog 5	0.017
wls	wntless homolog (Drosophila)	0.017
chrna2a	cholinergic receptor, nicotinic, alpha polypeptide 2a (neuronal)	0.017
hoxa9a	homeo box A9a	0.017
fstl5	follistatin-like 5 and follistatin-like 5	0.017
dkk1b	dickkopf 1b	0.017
runx2b	runt-related transcription factor 2b	0.017
ptch1	patched 1	0.017
hoxb1b	homeo box B1b	0.017
clptm1	cleft lip and palate associated transmembrane protein 1	0.017
bbc3	BCL2 binding component 3	0.017
hoxa2b	homeo box A2b	0.016
ubiad1	UbiA prenyltransferase domain containing 1	0.016
plod1a	procollagen-lysine 1, 2-oxoglutarate 5-dioxygenase 1a	0.016
hoxa3a	homeo box A3a	0.016
cyp26b1	cytochrome P450, family 26, subfamily b, polypeptide 1	0.016
snai1a	snail homolog 1a (Drosophila)	0.016
egr1	early growth response 1	0.016
ndr1	nodal-related 1	0.016
chsy1	chondroitin sulfate synthase 1	0.016
dmrt2a	doublesex and mab-3 related transcription factor 2a	0.016
fzd7b	frizzled homolog 7b	0.015
hsf2	heat shock factor 2	0.015
tfr1a	transferrin receptor 1a	0.015
tbx18	T-box 18	0.015	Zebrafish
pdgfrl	platelet-derived growth factor receptor-like	0.015
zgc:171495	zgc:171495	0.015
pou5f1	POU domain, class 5, transcription factor 1	0.015
ccdc47	coiled-coil domain containing 47	0.015
neurod4	neurogenic differentiation 4	0.015	Zebrafish
gng2	guanine nucleotide binding protein (G protein), gamma 2	0.015
tll1	tolloid-like 1	0.015
gdf6a	growth differentiation factor 6a	0.015
igfbp3	insulin-like growth factor binding protein 3	0.014
boc	brother of CDO	0.014
cry3	cryptochrome 3	0.014
lrrtm1	leucine rich repeat transmembrane neuronal 1	0.014
loxl2b	lysyl oxidase-like 2b	0.014
nog1	noggin 1	0.014
sox9a	SRY-box containing gene 9a	0.014
tnc	tenascin C	0.014
pax7a	paired box gene 7a	0.014
roraa	RAR-related orphan receptor A, paralog a	0.014
lhx2b	LIM homeobox 2b	0.014
snai1b	snail homolog 1b (Drosophila)	0.014
her5	hairy-related 5	0.014
per2	period homolog 2 (Drosophila)	0.013
si:dkey-7c22.1	si:dkey-7c22.1	0.013
trpm7	transient receptor potential cation channel, subfamily M, member 7	0.013
slc17a7	solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 7	0.013
pacsin3	protein kinase C and casein kinase substrate in neurons 3	0.013
zeb1	zinc finger E-box binding homeobox 1	0.013
fzd8b	frizzled homolog 8b	0.013
fzd5	frizzled homolog 5	0.013
lratb	lecithin retinol acyltransferase b (phosphatidylcholine--retinol O-acyltransferase b)	0.013
cftr	cystic fibrosis transmembrane conductance regulator, ATP-binding cassette (sub-family C, member 7)	0.013
id1	inhibitor of DNA binding 1	0.013
dcc	deleted in colorectal carcinoma	0.013
wif1	wnt inhibitory factor 1	0.013
pdzrn3	PDZ domain containing RING finger 3 and PDZ domain containing ring finger 3	0.013
wnt8a	wingless-type MMTV integration site family, member 8a	0.013
col4a6	collagen, type IV, alpha 6	0.013
wnt2	wingless-type MMTV integration site family member 2	0.013
robo4	roundabout homolog 4	0.013
hoxa1a	homeo box A1a	0.013
vox	ventral homeobox	0.013
rtn4rl2b	reticulon 4 receptor-like 2b	0.013
sars	seryl-tRNA synthetase	0.013
rxrga	retinoid x receptor, gamma a	0.012
foxd5	forkhead box D5	0.012
notch1a	notch homolog 1a	0.012
alcama	activated leukocyte cell adhesion molecule a	0.012
fgfrl1a	fibroblast growth factor receptor-like 1a	0.012
igfbp7	insulin-like growth factor binding protein 7	0.012
fech	ferrochelatase	0.012
tfr1b	transferrin receptor 1b	0.012
zgc:85866	zgc:85866	0.012
nipblb	novel protein similar to vertebrate Nipped-B homolog and nipped-b homolog b (Drosophila)	0.012
hnf1ba	HNF1 homeobox Ba	0.012
nr1d2a	nuclear receptor subfamily 1, group D, member 2a	0.012	Zebrafish
irx4b	iroquois homeobox protein 4b	0.012
tpm4	tropomyosin 4	0.012
dlb	deltaB	0.012	Zebrafish
notch1b	notch homolog 1b	0.012
dbx1b	developing brain homeobox 1b	0.012
pdgfaa	platelet-derived growth factor alpha a	0.011
six4a	sine oculis homeobox homolog 4a	0.011
wnt3a	wingless-type MMTV integration site family, member 3A	0.011
spry4	sprouty (Drosophila) homolog 4	0.011
mafk	v-maf musculoaponeurotic fibrosarcoma oncogene homolog K (avian)	0.011
wnt8b	wingless-type MMTV integration site family, member 8b	0.011
foxc1b	forkhead box C1b	0.011
myh6	myosin, heavy polypeptide 6, cardiac muscle, alpha	0.011
tcf12	transcription factor 12	0.011
fgf3	fibroblast growth factor 3	0.011
hey2	hairy/enhancer-of-split related with YRPW motif 2	0.011
mafba	v-maf musculoaponeurotic fibrosarcoma oncogene family, protein B (avian)	0.011
cyp26c1	cytochrome P450, family 26, subfamily C, polypeptide 1	0.011
ism1	isthmin 1	0.011
twist3	twist3	0.011	Zebrafish
pcdh18b	protocadherin 18b	0.011
pmp22a	peripheral myelin protein 22a	0.011
ubin	ataxin-1 ubiquitin-like interacting protein	0.011
klf4	Kruppel-like factor 4	0.011
sulf1	sulfatase 1	0.011
LOC568484	glutamate receptor, metabotropic	0.011
gpc4	glypican 4	0.010
vsx2	visual system homeobox 2	0.010
nrp2b	neuropilin 2b	0.010
im:7164961	im:7164961	0.010
fbln4	fibulin 4	0.010
dbx1a	developing brain homeobox 1a	0.010
git2b	G protein-coupled receptor kinase interactor 2b	0.010
cdh4	cadherin 4, retinal	0.010
fli1a	friend leukemia integration 1a	0.010
gng13a	guanine nucleotide binding protein (G protein), gamma 13a	0.010
map2k4a	mitogen-activated protein kinase kinase 4a	0.010
gng12a	guanine nucleotide binding protein (G protein), gamma 12a	0.010
sox10	SRY-box containing gene 10	0.010
zdhhc8b	zinc finger, DHHC-type containing 8b	0.010
dedd1	death effector domain-containing 1	0.010
kcnh2	potassium voltage-gated channel, subfamily H (eag-related), member 2	0.010
ptch2	patched 2	0.010