IMP

Process View

Danio rerio

7 genes annotated in zebrafish

forebrain neuron development

The process whose specific outcome is the progression of a neuron that resides in the forebrain, from its initial commitment to its fate, to the fully functional differentiated cell.

Loading network...

In addition to gene-name show these genes:

Known genes in the process in zebrafish Include functional analogs

Network Filters

Minimum relationship confidence:

Maximum number of genes:

Highlight known relationships in gold.

Graphical Options

Adjust edge length:

Adjust node size:

Fixed layout

Black background

Low confidence color:

Med confidence color:

High confidence color:

Hide the legend in the network

Save Options

Gene Predictions

Click on a gene's description to view its network relationships with genes known to be involved in "forebrain neuron development"

Show only novel predictions Show only unknown genes Highlight genes with functional analogs involved in "forebrain neuron development" (in gray)

Name	Description	Probability	Func Analog Organism
lhx2b	LIM homeobox 2b	0.999
pax6b	paired box gene 6b	0.995
dla	deltaA	0.994
pax6a	paired box gene 6a	0.984
foxp2	forkhead box P2	0.983
rx3	retinal homeobox gene 3	0.982
atoh1a	atonal homolog 1a	0.981	Zebrafish
barhl2	BarH-like 2	0.981
isl1	islet1	0.978
ascl1a	achaete-scute complex-like 1a (Drosophila)	0.970
otpb	orthopedia homolog b	0.949
arx	aristaless related homeobox	0.936	Mouse
dlx2a	distal-less homeobox gene 2a	0.933
nrp1a	neuropilin 1a	0.918	Mouse
otx2	orthodenticle homolog 2	0.913
neurog1	neurogenin 1	0.888
olig2	oligodendrocyte lineage transcription factor 2	0.880
gli1	GLI-Kruppel family member 1	0.853
shha	sonic hedgehog a	0.848
nr2e1	nuclear receptor subfamily 2, group E, member 1	0.845
fgf3	fibroblast growth factor 3	0.818
pitx3	paired-like homeodomain transcription factor 3	0.802
emx3	empty spiracles homeobox 3	0.800
pax2a	paired box gene 2a	0.792
fgfr3	fibroblast growth factor receptor 3	0.788
nkx2.1a	NK2 homeobox 1a	0.761
boc	brother of CDO	0.747
foxg1a	forkhead box G1a	0.744	Mouse
dlx1a	distal-less homeobox gene 1a	0.741
fgf8a	fibroblast growth factor 8 a	0.740
eya1	eyes absent homolog 1	0.723
dlx5a	distal-less homeobox gene 5a	0.704
met	met proto-oncogene (hepatocyte growth factor receptor)	0.680
zic1	zic family member 1 (odd-paired homolog, Drosophila)	0.669
gbx2	gastrulation brain homeo box 2	0.644	Mouse
lmx1b.1	LIM homeobox transcription factor 1, beta 1	0.614
gli2a	GLI-Kruppel family member GLI2a	0.589
wu:fv91b12	wu:fv91b12	0.577
dmbx1a	diencephalon/mesencephalon homeobox 1a	0.567
cnr1	cannabinoid receptor 1	0.564
fgfr1a	fibroblast growth factor receptor 1a	0.561	Rat
irx4b	iroquois homeobox protein 4b	0.545
robo3	roundabout homolog 3	0.535
neurod	neurogenic differentiation	0.529	Zebrafish
sox9a	SRY-box containing gene 9a	0.528
sim1a	single-minded homolog 1a (Drosophila)	0.527
dld	deltaD	0.507
six3b	sine oculis homeobox homolog 3b	0.503
fezf2	FEZ family zinc finger 2	0.494	Mouse
pou3f1	POU class 3 homeobox 1	0.491
dbx1a	developing brain homeobox 1a	0.477
atoh1b	atonal homolog 1b	0.457	Zebrafish
fgfr4	fibroblast growth factor receptor 4	0.425
lef1	lymphocyte enhancer binding factor 1	0.411
nr4a2b	nuclear receptor subfamily 4, group A, member 2b	0.410
robo2	roundabout homolog 2	0.404	Mouse
elavl3	ELAV (embryonic lethal, abnormal vision, Drosophila)-like 3 (Hu antigen C)	0.396
alcama	activated leukocyte cell adhesion molecule a	0.373
cdh2	cadherin 2, neuronal	0.365
fgfr2	fibroblast growth factor receptor 2	0.362	Mouse
eng2b	engrailed 2b	0.351
sox10	SRY-box containing gene 10	0.333
tbx2b	T-box 2b	0.326
rx2	retinal homeobox gene 2	0.315
six3a	sine oculis homeobox homolog 3a	0.310
efnb2a	ephrin B2a	0.296
sox1a	SRY-box containing gene 1a	0.293
olfm2	olfactomedin 2	0.293
th	tyrosine hydroxylase	0.289
nrp1b	neuropilin 1b	0.266	Mouse
pcdh10b	protocadherin 10b	0.264
phox2a	paired-like homeobox 2a	0.235
irx1a	iroquois homeobox protein 1, a	0.234
nrp2a	neuropilin 2a	0.233	Mouse
wnt8b	wingless-type MMTV integration site family, member 8b	0.228
dlx6a	distal-less homeobox gene 6a	0.208
foxd3	forkhead box D3	0.206
neurod4	neurogenic differentiation 4	0.206	Zebrafish
neo1	neogenin 1	0.204
fgf8b	fibroblast growth factor 8 b	0.203
irx1b	iroquois homeobox protein 1, b	0.203
nkx2.2a	NK2 transcription factor related 2a	0.194
chrna6	cholinergic receptor, nicotinic, alpha 6	0.191
nrp2b	neuropilin 2b	0.188	Mouse
slc6a3	solute carrier family 6 (neurotransmitter transporter, dopamine), member 3	0.178
efnb1	ephrin B1	0.176
otx1b	orthodenticle homolog 1b	0.172
pcp4a	Purkinje cell protein 4a	0.171
tbx1	T-box 1	0.166
mab21l2	mab-21-like 2	0.161
hoxb2a	homeo box B2a	0.148
ntn1b	netrin 1b	0.142
emx2	empty spiracles homeobox 2	0.141
nkx2.1b	NK2 homeobox 1b	0.138
mib	mind bomb	0.133
notch1a	notch homolog 1a	0.128
gpr126	G protein-coupled receptor 126	0.123
twist1a	twist1a	0.118	Zebrafish
coe2	coe2	0.114
ntn1a	netrin 1a	0.108
slit3	slit (Drosophila) homolog 3	0.103
antxr1	anthrax toxin receptor 1	0.102
eng2a	engrailed 2a	0.096
fgf19	fibroblast growth factor 19	0.096
epha4a	eph receptor A4a	0.094
lhx3	LIM homeobox 3	0.094
pdzrn3	PDZ domain containing RING finger 3 and PDZ domain containing ring finger 3	0.091
fgf10a	fibroblast growth factor 10a	0.089
ptf1a	pancreas specific transcription factor, 1a	0.089	Zebrafish
drd2l	dopamine receptor D2 like	0.084
dlx2b	distal-less homeobox gene 2b	0.083
tgfb2	transforming growth factor, beta 2	0.082
prox1	prospero-related homeobox gene 1	0.081
nxph1	neurexophilin 1	0.080
gli2b	GLI-Kruppel family member GLI2b	0.079
meis2.2	myeloid ecotropic viral integration site 2.2	0.079
bmpr1ba	bone morphogenetic protein receptor, type 1ba	0.075
ephb3a	eph receptor B3a	0.072
grhl2b	grainyhead-like 2b (Drosophila)	0.071
dlb	deltaB	0.071
foxa1	forkhead box A1	0.070
oprd1b	opioid receptor, delta 1b	0.068
msxe	muscle segment homeobox E	0.066
sox2	SRY-box containing gene 2	0.066
wu:fi18a01	wu:fi18a01	0.065
foxn4	forkhead box N4	0.064
six2a	sine oculis-related homeobox 2a	0.064
tbx22	T-box 22	0.062
gdnf	glial cell derived neurotrophic factor	0.061
sox21b	SRY-box containing gene 21 b	0.059
lhx5	LIM homeobox 5	0.059
cxcr4b	chemokine (C-X-C motif), receptor 4b	0.058
hoxd4a	homeo box D4a	0.058
sema3d	semaphorin 3d	0.058
nr2f2	nuclear receptor subfamily 2, group F, member 2	0.057
tfap2a	transcription factor AP-2 alpha	0.056	Mouse
traf4a	tnf receptor-associated factor 4a	0.056
si:dkeyp-59a8.4	si:dkeyp-59a8.4	0.055
gfra1a	gdnf family receptor alpha 1a	0.054
bhlhe22	basic helix-loop-helix family, member e22	0.053
otpa	orthopedia homolog a	0.053
ebf3	early B-cell factor 3	0.052
irx7	iroquois homeobox protein 7	0.051
gli3	GLI-Kruppel family member GLI3	0.049
st8sia2	ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2	0.048
egr1	early growth response 1	0.046
lhx1a	LIM homeobox 1a	0.046
zic2a	zic family member 2 (odd-paired homolog, Drosophila), a	0.045
evx1	even-skipped homeobox 1	0.045
adcyap1r1	adenylate cyclase activating polypeptide 1 (pituitary) receptor type I	0.045
otx5	orthodenticle homolog 5	0.044
gria1a	glutamate receptor, ionotropic, AMPA 1a	0.044
dlx4b	distal-less homeobox gene 4b	0.044
dzip1	DAZ interacting protein 1	0.044
cyp26b1	cytochrome P450, family 26, subfamily b, polypeptide 1	0.041
shhb	sonic hedgehog b	0.040
apc	adenomatosis polyposis coli	0.040
sst1.1	somatostatin 1, tandem duplicate 1	0.039
tbr1b	T-box, brain, 1b	0.038
six4b	sine oculis homeobox homolog 4b	0.037
tyr	tyrosinase	0.036
pou4f2	POU domain, class 4, transcription factor 2	0.036
efna2	ephrin A2	0.035
drd3	dopamine receptor D3	0.035
grm5a	glutamate receptor, metabotropic 5a	0.035
mafba	v-maf musculoaponeurotic fibrosarcoma oncogene family, protein B (avian)	0.034
cyp19a1b	cytochrome P450, family 19, subfamily A, polypeptide 1b	0.033
barhl1.2	BarH-like 1.2	0.033
pcdh10a	protocadherin 10a	0.033
lhx9	LIM homeobox 9	0.032
gata2a	GATA-binding protein 2a	0.032
gria4a	glutamate receptor, ionotropic, AMPA 4a	0.031
stmn4	stathmin-like 4	0.031
esrrga	estrogen-related receptor gamma a	0.031
irx5a	iroquois homeobox protein 5a	0.031
six4a	sine oculis homeobox homolog 4a	0.030
avpl	arginine vasopressin-like	0.030
drd2a	dopamine receptor D2a	0.029	Mouse
pax7a	paired box gene 7a	0.029
nr4a2a	nuclear receptor subfamily 4, group A, member 2a	0.029
aldh1a2	aldehyde dehydrogenase 1 family, member A2	0.028
lhx6	LIM homeobox 6	0.028	Mouse
sema3aa	semaphorin 3aa	0.027	Mouse
tbx24	T-box 24	0.027
adarb1	adenosine deaminase, RNA-specific, B1	0.027
eomesa	eomesodermin homolog a	0.027
slc17a7	solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 7	0.027
meis3	myeloid ecotropic viral integration site 3	0.026
jag2	jagged 2	0.026
nr4a3	nuclear receptor subfamily 4, group A, member 3	0.025	Zebrafish
hmx3	homeo box (H6 family) 3	0.024
efna5b	ephrin A5b	0.024
emx1	empty spiracles homeobox 1	0.024
tbx5a	T-box 5a	0.023
ddc	dopa decarboxylase	0.023
dmrt2a	doublesex and mab-3 related transcription factor 2a	0.023
vax2	ventral anterior homeobox 2	0.023
vsx1	visual system homeobox 1 homolog, chx10-like	0.022
tcf7l2	transcription factor 7-like 2 (T-cell specific, HMG-box)	0.022
LOC569768	metabotropic glutamate receptor 8-like	0.022
gria3a	glutamate receptor, ionotropic, AMPA 3a	0.021
cadm3	cell adhesion molecule 3	0.021
trpm7	transient receptor potential cation channel, subfamily M, member 7	0.021
chga	chromogranin A	0.020
olig3	oligodendrocyte transcription factor 3	0.020
gfra1b	gdnf family receptor alpha 1b	0.020
flh	floating head	0.020
kirrela	kin of IRRE like a	0.020
gria4b	glutamate receptor, ionotropic, AMPA 4b	0.019
hoxd3a	homeo box D3a	0.019
hmx4	H6 family homeobox 4	0.019
hoxb4a	homeo box B4a	0.019
nr2f1b	nuclear receptor subfamily 2, group F, member 1b	0.019
raraa	retinoic acid receptor, alpha a	0.019
ptprsa	protein tyrosine phosphatase, receptor type, s, a	0.018
pcdh19	protocadherin 19	0.018
spaw	southpaw	0.018
ek1	eph-like kinase 1	0.018
notch2	notch homolog 2	0.018
prdm5	PR domain containing 5	0.018
grm1a	glutamate receptor, metabotropic 1a	0.017
pcdh17	protocadherin 17	0.017
cenph	centromere protein H	0.016
hoxa9a	homeo box A9a	0.016
ppp1r12a	protein phosphatase 1, regulatory (inhibitor) subunit 12A	0.016
myf5	myogenic factor 5	0.016
bdnf	brain-derived neurotrophic factor	0.016
hoxb3a	homeo box B3a	0.016
hoxb1a	homeo box B1a	0.015
im:7137555	im:7137555	0.015
metrn	meteorin, glial cell differentiation regulator	0.015
nkx3.2	NK3 homeobox 2	0.015
isl2a	islet2a	0.015
phox2b	paired-like homeobox 2b	0.015
cadm4	cell adhesion molecule 4	0.014
barhl1.1	BarH-like 1.1	0.014
arnt2	aryl hydrocarbon receptor nuclear translocator 2	0.014
tcf4	transcription factor 4	0.014
sim2	single-minded homolog 2 (Drosophila)	0.014
hoxb5b	homeo box B5b	0.014
pea3	ETS-domain transcription factor pea3	0.014
LOC100007758	novel protein similar to vertebrate SLIT and NTRK-like family, member 3 (SLITRK3)	0.014
crh	corticotropin releasing hormone	0.014
axin2	axin 2 (conductin, axil)	0.013
gria3b	glutamate receptor, ionotrophic, AMPA 3b	0.013
hoxb6a	homeo box B6a	0.013
atoh7	atonal homolog 7	0.013	Zebrafish
ltk	leukocyte tyrosine kinase	0.013
pax8	paired box gene 8	0.013
gata3	GATA-binding protein 3	0.013
disc1	disrupted in schizophrenia 1	0.013
tal1	T-cell acute lymphocytic leukemia 1	0.013	Zebrafish
tfap2b	transcription factor AP-2 beta	0.012
si:ch211-209p5.2	si:ch211-209p5.2	0.012
sema3fb	semaphorin 3fb	0.012
dbx1b	developing brain homeobox 1b	0.012
htr1ab	5-hydroxytryptamine (serotonin) receptor 1A b	0.012
gria1b	glutamate receptor, ionotropic, AMPA 1b	0.012
zeb2a	zinc finger E-box binding homeobox 2a	0.012
her4.2	hairy-related 4.2	0.012
hlxb9lb	homeo box HB9 like b	0.011
neurod6a	neurogenic differentiation 6a	0.011
crb2a	crumbs homolog 2a	0.011
atoh1c	atonal homolog 1c	0.011	Zebrafish
hoxa3a	homeo box A3a	0.011
msxd	muscle segment homeobox D	0.011
slc18a2	solute carrier family 18 (vesicular monoamine), member 2	0.011
cadm2b	cell adhesion molecule 2b	0.011
jag1b	jagged 1b	0.011
tgfbi	transforming growth factor, beta-induced	0.011
pou3f3a	POU class 3 homeobox 3a	0.011
lmo3	LIM domain only 3	0.011
lrrtm1	leucine rich repeat transmembrane neuronal 1	0.011
dusp2	dual specificity phosphatase 2	0.011
gsx1	GS homeobox 1	0.010
id:ibd2808	id:ibd2808	0.010
itga5	integrin, alpha 5 (fibronectin receptor, alpha polypeptide)	0.010
slc17a6b	solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 6b	0.010
cadm1a	cell adhesion molecule 1a	0.010
rorb	RAR-related orphan receptor B	0.010