IMP

Process View

Danio rerio

17 genes annotated in zebrafish

visual perception

The series of events required for an organism to receive a visual stimulus, convert it to a molecular signal, and recognize and characterize the signal. Visual stimuli are detected in the form of photons and are processed to form an image.

Loading network...

In addition to gene-name show these genes:

Known genes in the process in zebrafish Include functional analogs

Network Filters

Minimum relationship confidence:

Maximum number of genes:

Highlight known relationships in gold.

Graphical Options

Adjust edge length:

Adjust node size:

Fixed layout

Black background

Low confidence color:

Med confidence color:

High confidence color:

Hide the legend in the network

Save Options

Gene Predictions

Click on a gene's description to view its network relationships with genes known to be involved in "visual perception"

Show only novel predictions Show only unknown genes Highlight genes with functional analogs involved in "visual perception" (in gray)

Name	Description	Probability	Func Analog Organism
synj1	synaptojanin 1	0.895
gc3	guanylyl cyclase 3	0.889	Zebrafish
rx1	retinal homeobox gene 1	0.773
vsx2	visual system homeobox 2	0.766
guca1c	guanylate cyclase activator 1C	0.706
opn1sw1	opsin 1 (cone pigments), short-wave-sensitive 1	0.567
rx2	retinal homeobox gene 2	0.459
col1a2	collagen, type I, alpha 2	0.401
col5a1	procollagen, type V, alpha 1	0.368
gnat2	guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 2	0.359
lamc1	laminin, gamma 1	0.300
arr3a	arrestin 3a, retinal (X-arrestin)	0.272
ift88	intraflagellar transport 88 homolog	0.267
cdh23	cadherin-like 23	0.236
slc6a8	solute carrier family 6 (neurotransmitter transporter, creatine), member 8	0.213
col1a1a	collagen, type I, alpha 1a	0.202	Human
crb2a	crumbs homolog 2a	0.198
mpp5b	membrane protein, palmitoylated 5b (MAGUK p55 subfamily member 5b)	0.197
zgc:56548	zgc:56548	0.191
epb41l5	erythrocyte membrane protein band 4.1 like 5	0.183
crygm2f	crystallin, gamma M2f	0.152
gna13a	guanine nucleotide binding protein (G protein), alpha 13a	0.151
gna11	guanine nucleotide binding protein (G protein), alpha 11 (Gq class)	0.145
cacnb2a	calcium channel, voltage-dependent, beta 2a	0.135
crb3a	crumbs homolog 3a	0.129
crb2b	crumbs homolog 2b	0.127
gna13b	guanine nucleotide binding protein (G protein), alpha 13b	0.122	Zebrafish
irbp	interphotoreceptor retinoid-binding protein	0.118
lama1	laminin, alpha 1	0.118	Zebrafish
cnp	2',3'-cyclic nucleotide 3' phosphodiesterase	0.117
cacnb1	calcium channel, voltage-dependent, beta 1 subunit	0.113
pde6c	phosphodiesterase 6C, cGMP-specific, cone, alpha prime	0.111
crygmxl2	crystallin, gamma MX, like 2	0.110
crygm2d15	crystallin, gamma M2d15	0.109	Human
cacnb4a	calcium channel, voltage-dependent, beta 4a subunit	0.108	Mouse
slc17a8	solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 8	0.102	Zebrafish
frem3	Fras1 related extracellular matrix 3	0.102
crygm2d8	crystallin, gamma M2d8	0.101	Human
cplx4a	complexin 4a	0.099
nr2e3	nuclear receptor subfamily 2, group E, member 3	0.097
rbp4l	retinol binding protein 4, like	0.093
crygm3	crystallin, gamma M3	0.092
cyfip2	cytoplasmic FMR1 interacting protein 2	0.091
gnas	GNAS complex locus	0.091
nrl	neural retina leucine zipper	0.091
rho	rhodopsin	0.087	Mouse
sparc	secreted acidic cysteine rich glycoprotein	0.086
gnai2	guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 2	0.086	Zebrafish
otx5	orthodenticle homolog 5	0.083	Zebrafish
crygm2a	crystallin, gamma M2a	0.081	Human
tert	telomerase reverse transcriptase	0.081
arr3b	arrestin 3b, retinal (X-arrestin)	0.080
crygmx	crystallin, gamma MX	0.072
grifin	galectin related inter-fiber protein	0.071
gnat1	guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 1	0.071	Zebrafish Mouse
crygm2d7	crystallin, gamma M2d7	0.071
plod3	procollagen-lysine, 2-oxoglutarate 5-dioxygenase 3	0.069
crygm2d13	crystallin, gamma M2d13	0.069	Human
crb3b	crumbs homolog 3b	0.068
ctbp2l	C-terminal binding protein 2, like	0.067
crygm2b	crystallin, gamma M2b	0.067
pafah1b1b	platelet-activating factor acetylhydrolase, isoform Ib, alpha subunit b	0.066
opn1lw1	opsin 1 (cone pigments), long-wave-sensitive, 1	0.066
slc17a6b	solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 6b	0.065
zgc:162213	zgc:162213	0.064
mipb	major intrinsic protein of lens fiber b	0.064	Mouse
rpe65a	retinal pigment epithelium-specific protein 65a	0.063	Mouse
gna14	guanine nucleotide binding protein (G protein), alpha 14	0.061	Zebrafish
cryba2b	crystallin, beta A2b	0.059
crygm2d10	crystallin, gamma M2d10	0.058
crygm2d11	crystallin, gamma M2d11	0.058	Human
rpgr	retinitis pigmentosa GTPase regulator protein 1	0.058
cadm3	cell adhesion molecule 3	0.057
gfi1.2	growth factor independent 1.2	0.056
gnai3	guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 3	0.055
otx2	orthodenticle homolog 2	0.054	Zebrafish
crygm2d2	crystallin, gamma M2d2	0.054
crygm4	crystallin, gamma M4	0.054
aanat2	arylalkylamine N-acetyltransferase	0.054
kif5c	kinesin family member 5C	0.053
col5a3b	collagen type V alpha-3b	0.052
cadm2b	cell adhesion molecule 2b	0.052
LOC100331502	melanopsin-B-like	0.048
opn4l	opsin 4, like	0.048
crygn1	crystallin, gamma N1	0.048
mpp5a	membrane protein, palmitoylated 5a (MAGUK p55 subfamily member 5a)	0.047
scinla	scinderin like a	0.047
crx	cone-rod homeobox	0.047
gna12	guanine nucleotide binding protein (G protein) alpha 12	0.045	Zebrafish
lamc3	laminin, gamma 3	0.045
crygn2	crystallin, gamma N2	0.044
elovl4b	elongation of very long chain fatty acids (FEN1/Elo2, SUR4/Elo3, yeast)-like 4b	0.044
rdh8l	retinol dehydrogenase 8 like	0.044
crb1	crumbs homolog 1 (Drosophila)	0.043
gnaz	guanine nucleotide binding protein (G protein), alpha z polypeptide	0.043
f2rl1.2	coagulation factor II (thrombin) receptor-like 1.2	0.043
scn1ba	sodium channel, voltage-gated, type I, beta a	0.042
crygm1	crystallin, gamma M1	0.042	Human
crygs1	crystallin, gamma S1	0.041
ahi1	Abelson helper integration site 1	0.041
crygm6	crystallin, gamma M6	0.041	Human
grk7a	G-protein-coupled receptor kinase 7a	0.041
gnal	guanine nucleotide binding protein (G protein), alpha activating activity polypeptide, olfactory type	0.041
zgc:92392	zgc:92392	0.037
pde6h	phosphodiesterase 6H, cGMP-specific, cone, gamma	0.037
slc1a2b	solute carrier family 1 (glial high affinity glutamate transporter), member 2b	0.037
cyp19a1a	cytochrome P450, family 19, subfamily A, polypeptide 1a	0.036
LOC100332929	guanine nucleotide-binding protein subunit alpha-15-like	0.036
mipa	major intrinsic protein of lens fiber a	0.035	Mouse
LOC557722	similar to transient receptor potential cation channel, subfamily M, member 5	0.035
zgc:100942	zgc:100942	0.035	Zebrafish
shha	sonic hedgehog a	0.034
zgc:101761	zgc:101761	0.034
zgc:73155	zgc:73155	0.034
col19a1	collagen, type XIX, alpha 1	0.034
kif17	kinesin family member 17	0.033
lamb1a	laminin, beta 1a	0.033
thrb	thyroid hormone receptor beta	0.033
gnai1	guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 1	0.032
crygm7	crystallin, gamma M7	0.032	Human
nsfa	N-ethylmaleimide-sensitive factor a	0.031
cadm1b	cell adhesion molecule 1b	0.031
ush1c	Usher syndrome 1C (autosomal recessive, severe)	0.030
pdca	phosducin a	0.030
postn	periostin, osteoblast specific factor	0.029
zgc:103750	zgc:103750	0.028
col12a1	collagen, type XII, alpha 1	0.028
fabp11a	fatty acid binding protein 11a	0.028
si:ch211-207c7.1	si:ch211-207c7.1	0.028
crygm2d12	crystallin, gamma M2d12	0.027	Human
opn1mw1	opsin 1 (cone pigments), medium-wave-sensitive, 1	0.027
LOC556160	guanine nucleotide-binding protein subunit alpha-14-like	0.027
cx55.5	connexin 55.5	0.027
rcv1	recoverin	0.026
pdzd7a	PDZ domain containing 7a	0.026
pth1b	parathyroid hormone 1b	0.026
LOC799274	kinesin heavy chain isoform 5A-like	0.026
pcdh15a	protocadherin 15a	0.025	Zebrafish Mouse
si:ch73-6k14.1	si:ch73-6k14.1	0.025
opn1sw2	opsin 1 (cone pigments), short-wave-sensitive 2	0.024
grk1b	G protein-coupled receptor kinase 1 b	0.024	Zebrafish
musk	muscle, skeletal, receptor tyrosine kinase	0.024
camkvb	CaM kinase-like vesicle-associated b	0.024
crygm2d6	crystallin, gamma M2d6	0.024
rdh5	retinol dehydrogenase 5 (11-cis/9-cis)	0.024
col5a3	collagen, type V, alpha 3	0.024
clrn1	clarin 1	0.024
kiss1ra	KISS1 receptor a	0.024
arl3l2	ADP-ribosylation factor-like 3, like 2	0.023
crygs4	crystallin, gamma S4	0.023
rab11bb	RAB11B, member RAS oncogene family, b	0.023
hapln3	hyaluronan and proteoglycan link protein 3	0.023
crygm2c	crystallin, gamma M2c	0.023
slc26a5	solute carrier family 26, member 5	0.022
col18a1	collagen type XVIII, alpha 1	0.022
pde6a	phosphodiesterase 6A, cGMP-specific, rod, alpha	0.022
jhdm1da	jumonji C domain containing histone demethylase 1 homolog Da (S. cerevisiae)	0.022
wu:fc67d01	wu:fc67d01	0.022
b4galt4	UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 4	0.022
ogn	osteoglycin	0.022
crygmxl1	crystallin, gamma MX, like 1	0.022	Human
gdnf	glial cell derived neurotrophic factor	0.022
zgc:56488	zgc:56488	0.022
arnt2	aryl hydrocarbon receptor nuclear translocator 2	0.022
nyx	nyctalopin	0.022
lamb2	laminin, beta 2 (laminin S)	0.021	Zebrafish Mouse
col5a2l	collagen, type V, alpha 2-like	0.021
im:7141132	im:7141132	0.021
gnav1	guanine nucleotide binding protein (G protein) alpha v1	0.021	Zebrafish
dmd	dystrophin	0.021
foxc1a	forkhead box C1a	0.021
s100s	S100 calcium binding protein S	0.021
kiss1	KiSS-1 metastasis-suppressor	0.021
LOC565256	similar to Metabotropic glutamate receptor 3 precursor (mGluR3)	0.021
zgc:101859	zgc:101859	0.021
slc12a2	solute carrier family 12 (potassium/chloride transporters), member 2	0.021
gnaq	guanine nucleotide binding protein (G protein), q polypeptide	0.020
cyp1d1	cytochrome P450, family 1, subfamily D, polypeptide 1	0.020
pvrl1a	poliovirus receptor-related 1a	0.020
zgc:171792	zgc:171792	0.020
guca1d	guanylate cyclase activator 1d	0.020
lama2	laminin, alpha 2	0.020
crybb1l2	crystallin, beta B1, like 2	0.020
crybb2	crystallin, beta B2	0.020	Mouse
per2	period homolog 2 (Drosophila)	0.020
fgf19	fibroblast growth factor 19	0.019
cryba1b	crystallin, beta A1b	0.019
icn2	ictacalcin 2	0.019
gnai2l	guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 2, like	0.019	Zebrafish
zgc:114181	zgc:114181	0.019
lysmd3	LysM, putative peptidoglycan-binding, domain containing 3	0.019
sb:cb166	sb:cb166	0.019
zfp36l1a	zinc finger protein 36, C3H type-like 1a	0.019
calua	calumenin a	0.019
mdka	midkine-related growth factor	0.019
lin7a	lin-7 homolog A (C. elegans)	0.018
cryba2a	crystallin, beta A2a	0.018
bhlhe22	basic helix-loop-helix family, member e22	0.018
foxa	forkhead box A sequence	0.018
zgc:73230	zgc:73230	0.018
s100a10a	S100 calcium binding protein A10a	0.018
grk1a	G protein-coupled receptor kinase 1 a	0.018	Zebrafish
dmbx1a	diencephalon/mesencephalon homeobox 1a	0.018
slc17a6a	solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 6a	0.018	Zebrafish
crygm2d16	crystallin, gamma M2d16	0.018
sh3gl1b	SH3-domain GRB2-like 1b	0.017
cryba1l	crystallin, beta A1, like	0.017
pax6a	paired box gene 6a	0.017
bglap	bone gamma-carboxyglutamate (gla) protein	0.016
tas2r202	taste receptor, type 2, member 202	0.016
fzd2	frizzled homolog 2	0.016
rbp1a	retinol binding protein 1a, cellular	0.016
amh	anti-Mullerian hormone	0.016
robo2	roundabout homolog 2	0.016
fbln4	fibulin 4	0.016
rdh12	retinol dehydrogenase 12 (all-trans and 9-cis)	0.016
sh3gl2	SH3-domain GRB2-like 2	0.016
camk2g2	calcium/calmodulin-dependent protein kinase (CaM kinase) II gamma 2	0.016
zgc:73107	zgc:73107	0.016
lingo1a	leucine rich repeat and Ig domain containing 1a	0.015
zgc:112161	zgc:112161	0.015
slc6a9	solute carrier family 6 (neurotransmitter transporter, glycine), member 9	0.015
lamb4	laminin, beta 4	0.015	Zebrafish
ca16b	carbonic anhydrase XVI b	0.015
col11a1b	collagen type XI alpha-1b and collagen, type XI, alpha 1b	0.015
zgc:136903	zgc:136903	0.015
dpf2l	D4, zinc and double PHD fingers family 2, like	0.015
pitpnb	phosphotidylinositol transfer protein, beta	0.014
rlbp1a	retinaldehyde binding protein 1a	0.014
tnr	tenascin R (restrictin, janusin)	0.014
sypb	synaptophysin b	0.014
stra6	stimulated by retinoic acid gene 6 homolog (mouse)	0.014
sncgb	synuclein, gamma b (breast cancer-specific protein 1)	0.014
wu:fc18f06	wu:fc18f06	0.014
crabp2a	cellular retinoic acid binding protein 2, a	0.014
cry3	cryptochrome 3	0.014
rbm4.3	RNA binding motif protein 4.3	0.013
syne2a	spectrin repeat containing, nuclear envelope 2a	0.013
trpc5	transient receptor potential cation channel, subfamily C, member 5	0.013
drd4b	dopamine receptor D4b	0.013
cacna1da	calcium channel, voltage-dependent, L type, alpha 1D subunit, a	0.013
her1	hairy-related 1	0.013
olfm1a	olfactomedin 1a	0.013
mgp	matrix Gla protein	0.013
gc2	guanylyl cyclase 2	0.013	Zebrafish
zgc:77060	zgc:77060	0.013
rp2	retinitis pigmentosa 2 (X-linked recessive)	0.013
si:dkey-228g21.4	si:dkey-228g21.4	0.013
si:ch211-233e16.1	si:ch211-233e16.1	0.013
pafah1b1a	platelet-activating factor acetylhydrolase, isoform Ib, alpha subunit a	0.012
elnb	elastin b	0.012
ntrk3b	neurotrophic tyrosine kinase, receptor, type 3b	0.012
atp6v1al	ATPase, H+ transporting, lysosomal V1 subunit A, like	0.012
satb2	SATB homeobox 2	0.012
sagb	S-antigen; retina and pineal gland (arrestin) b	0.012	Zebrafish
grk7b	G protein-coupled receptor kinase 7b	0.012	Zebrafish
fgfr1b	fibroblast growth factor receptor 1b	0.012
dpysl5a	dihydropyrimidinase-like 5a	0.012
onecut1	one cut domain, family member 1	0.012
pard3	par-3 partitioning defective 3 homolog (C. elegans)	0.012
cyp2aa4	cytochrome P450, family 2, subfamily AA, polypeptide 4	0.012
LOC568484	glutamate receptor, metabotropic	0.012
gnao1a	guanine nucleotide binding protein (G protein), alpha activating activity polypeptide O, a	0.012	Zebrafish
igfbp5a	insulin-like growth factor binding protein 5a	0.012
notch1a	notch homolog 1a	0.011
bcl2l1	bcl2-like 1	0.011
cryaba	crystallin, alpha B, a	0.011
lifrb	leukemia inhibitory factor receptor alpha b	0.011
opn4a	opsin 4a (melanopsin)	0.011
pp	pyrophosphatase (inorganic)	0.011
cdipt	CDP-diacylglycerol--inositol 3-phosphatidyltransferase (phosphatidylinositol synthase)	0.011
pank1b	pantothenate kinase 1b	0.011
opn4x1	opsin 4x1	0.011
cntn1a	contactin 1a	0.011
bdnf	brain-derived neurotrophic factor	0.011
chrm3a	cholinergic receptor, muscarinic 3a	0.011
pde6b	phosphodiesterase 6B, cGMP-specific, rod, beta	0.011
slc4a1b	solute carrier family 4, anion exchanger, member 1b	0.010
cdh2	cadherin 2, neuronal	0.010
zgc:73359	zgc:73359	0.010
hsf4	heat shock transcription factor 4	0.010
zgc:103467	myosin, light chain 9, regulatory	0.010
nptx2b	neuronal pentraxin 2b	0.010
ntrk2b	neurotrophic tyrosine kinase, receptor, type 2b	0.010
ccdc85al	coiled-coil domain containing 85A, like	0.010
cebpd	CCAAT/enhancer binding protein (C/EBP), delta	0.010
si:dkey-151c10.1	si:dkey-151c10.1	0.010
zgc:92533	zgc:92533	0.010
dkk1b	dickkopf 1b	0.010
cep290	centrosomal protein 290	0.010
plp1a	proteolipid protein 1a	0.010