The network for 'transcription initiation from rna polymerase ii promoter' in your query organism is displayed on the left, if relationships are supported by the integrated data. Moving any of the genes in that network will simultaneously update the homologs in the networks displayed to the right (if they exist). Additionally, hovering over any nodes will highlight the identified functionally similar homologs in the other networks. Last, the bar above the networks allows you to remove/add additional organisms. Simily drag and drop the organism names in the desired order.

Multiple Organisms

transcription initiation from rna polymerase ii promoter

Any process involved in the assembly of the RNA polymerase II preinitiation complex (PIC) at an RNA polymerase II promoter region of a DNA template, resulting in the subsequent synthesis of RNA from that promoter. The initiation phase includes PIC assembly and the formation of the first few bonds in the RNA chain, including abortive initiation, which occurs when the first few nucleotides are repeatedly synthesized and then released. Promoter clearance, or release, is the transition between the initiation and elongation phases of transcription.

Homo sapiens
Name Description Probability Func Analog Organism
TBP TATA box binding protein 1.000
MED1 mediator complex subunit 1 1.000
MED29 mediator complex subunit 29 0.998
TAF4 TAF4 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 135kDa 0.998
CDK19 cyclin-dependent kinase 19 0.995
MED10 mediator complex subunit 10 0.992
MED26 mediator complex subunit 26 0.989
TRRAP transformation/transcription domain-associated protein 0.987
CDK8 cyclin-dependent kinase 8 0.984
LEO1 Leo1, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae) 0.983
SMAD4 SMAD family member 4 0.979
TAF5 TAF5 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 100kDa 0.953
MED21 mediator complex subunit 21 0.936
PSMD10 proteasome (prosome, macropain) 26S subunit, non-ATPase, 10 0.902
MED13 mediator complex subunit 13 0.892
PSMD4 proteasome (prosome, macropain) 26S subunit, non-ATPase, 4 0.875
PSMC1 proteasome (prosome, macropain) 26S subunit, ATPase, 1 0.870
MED12 mediator complex subunit 12 0.866
PSMC5 proteasome (prosome, macropain) 26S subunit, ATPase, 5 0.861
MED6 mediator complex subunit 6 0.859
PSMD11 proteasome (prosome, macropain) 26S subunit, non-ATPase, 11 0.853
PSMC6 proteasome (prosome, macropain) 26S subunit, ATPase, 6 0.836
TAF9 TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 32kDa 0.831
MED4 mediator complex subunit 4 0.807
TAF1 TAF1 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 250kDa 0.785
PSMD2 proteasome (prosome, macropain) 26S subunit, non-ATPase, 2 0.780
PSMD7 proteasome (prosome, macropain) 26S subunit, non-ATPase, 7 0.744
DCP1A DCP1 decapping enzyme homolog A (S. cerevisiae) 0.744
PSMD13 proteasome (prosome, macropain) 26S subunit, non-ATPase, 13 0.742
PSMC2 proteasome (prosome, macropain) 26S subunit, ATPase, 2 0.692
TRIM33 tripartite motif containing 33 0.677
SP1 Sp1 transcription factor 0.675
GTF2B general transcription factor IIB 0.630
PSMC3 proteasome (prosome, macropain) 26S subunit, ATPase, 3 0.622
TAF1C TATA box binding protein (TBP)-associated factor, RNA polymerase I, C, 110kDa 0.604
GTF2H1 general transcription factor IIH, polypeptide 1, 62kDa 0.593
CREBBP CREB binding protein 0.592
KAT2B K(lysine) acetyltransferase 2B 0.582
KAT2A K(lysine) acetyltransferase 2A 0.564
MED24 mediator complex subunit 24 0.545
PSMD6 proteasome (prosome, macropain) 26S subunit, non-ATPase, 6 0.524
TBX5 T-box 5 0.505
MED17 mediator complex subunit 17 0.460
TAF11 TAF11 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 28kDa 0.452
MED28 mediator complex subunit 28 0.433
NCOA6 nuclear receptor coactivator 6 0.432
MED25 mediator complex subunit 25 0.401
TBPL1 TBP-like 1 0.371
SMAD2 SMAD family member 2 0.337
SMAD9 SMAD family member 9 0.323
NCOR1 nuclear receptor corepressor 1 0.322
TAF2 TAF2 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 150kDa 0.320
FERMT2 fermitin family member 2 0.305
SKIL SKI-like oncogene 0.300
RARA retinoic acid receptor, alpha 0.300
PSMC4 proteasome (prosome, macropain) 26S subunit, ATPase, 4 0.295
EP300 E1A binding protein p300 0.272
MED23 mediator complex subunit 23 0.253
CDK7 cyclin-dependent kinase 7 0.248
AR androgen receptor 0.241
MED19 mediator complex subunit 19 0.239
PSMD8 proteasome (prosome, macropain) 26S subunit, non-ATPase, 8 0.198
WAPAL wings apart-like homolog (Drosophila) 0.185
MED20 mediator complex subunit 20 0.185
RXRA retinoid X receptor, alpha 0.184
ATXN7 ataxin 7 0.174
POLE3 polymerase (DNA directed), epsilon 3 (p17 subunit) 0.164
CCNC cyclin C 0.163
NBN nibrin 0.159
NCOR2 nuclear receptor corepressor 2 0.158
RTF1 Rtf1, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae) 0.155
BAZ1A bromodomain adjacent to zinc finger domain, 1A 0.154
ESR1 estrogen receptor 1 0.148
RNF138 ring finger protein 138 0.143
ARNT aryl hydrocarbon receptor nuclear translocator 0.128
GTF2A2 general transcription factor IIA, 2, 12kDa 0.125
TP53BP1 tumor protein p53 binding protein 1 0.120
DCP1B DCP1 decapping enzyme homolog B (S. cerevisiae) 0.116
PRMT6 protein arginine methyltransferase 6 0.116
HTT huntingtin 0.107
SSRP1 structure specific recognition protein 1 0.101
ZMYM2 zinc finger, MYM-type 2 0.099
E2F1 E2F transcription factor 1 0.098
SIRT1 sirtuin 1 0.098
PPARA peroxisome proliferator-activated receptor alpha 0.092
TAF6L TAF6-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor, 65kDa 0.086
NCOA1 nuclear receptor coactivator 1 0.084
MED14 mediator complex subunit 14 0.082
GTF2E1 general transcription factor IIE, polypeptide 1, alpha 56kDa 0.080
VDR vitamin D (1,25- dihydroxyvitamin D3) receptor 0.074
HMGN2 high mobility group nucleosomal binding domain 2 0.073
KLHL24 kelch-like 24 (Drosophila) 0.071
MED30 mediator complex subunit 30 0.066
MED13L mediator complex subunit 13-like 0.065
UPF2 UPF2 regulator of nonsense transcripts homolog (yeast) 0.063
DYRK1A dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A 0.060
SUZ12 suppressor of zeste 12 homolog (Drosophila) 0.059
PSMD3 proteasome (prosome, macropain) 26S subunit, non-ATPase, 3 0.056
MED8 mediator complex subunit 8 0.054
GTF2A1 general transcription factor IIA, 1, 19/37kDa 0.054
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Caenorhabditis elegans
Name Description Probability Func Analog Organism
H21P03.2 Protein H21P03.2 0.108
rpt-3 Protein RPT-3 0.081
rpt-5 Protein RPT-5 0.054
pqn-59 Protein PQN-59 0.048
mec-15 Protein MEC-15 0.046
CELE_Y106G6H.6 Protein Y106G6H.6 0.046
rpn-10 Protein RPN-10 0.044
pbs-6 Protein PBS-6 0.043
lst-3 Protein LST-3 0.042
pbs-5 Protein PBS-5 0.042
npp-2 Protein NPP-2 0.041
let-504 Protein LET-504 0.040
mdf-2 Protein MDF-2 0.039
F37C12.1 Protein F37C12.1 0.039
tag-135 Protein TAG-135 0.037
mig-32 Protein MIG-32 0.037
rpn-12 Protein RPN-12 0.036
pas-6 Protein PAS-6 0.034
rpt-2 Protein RPT-2 0.033
imb-1 Protein IMB-1 0.031
let-858 Protein LET-858 0.030
asd-1 Protein ASD-1 0.030
lsy-13 Protein LSY-13 0.029
F32D1.5 Protein F32D1.5 0.029
thoc-2 Protein THOC-2 0.029
prp-31 Protein PRP-31 0.028
hrpf-2 Protein HRPF-2 0.028
szy-20 Protein SZY-20 0.028
CELE_T04A8.8 Protein T04A8.8 0.027
C50F2.2 Protein C50F2.2 0.027
cee-1 Protein CEE-1 0.026
F58B3.7 Protein F58B3.7 0.025
bra-2 Protein BRA-2 0.025
ZC262.2 Protein ZC262.2 0.024
B0464.2 Protein B0464.2 0.024
B0205.9 Protein B0205.9 0.024
mep-1 Protein MEP-1 0.024
taf-12 Protein TAF-12 0.023
T28D9.4 Protein T28D9.4 0.023
lin-61 Protein LIN-61 0.023
ndc-80 Protein NDC-80 0.023
R04F11.3 Protein R04F11.3 0.023
ulp-2 Protein ULP-2 0.022
dpy-30 Protein DPY-30 0.022
B0511.7 Protein B0511.7 0.021
czw-1 Protein CZW-1 0.021
ten-1 Protein TEN-1 0.021
CELE_D1054.3 Protein D1054.3 0.021
F13C5.2 Protein F13C5.2 0.021
F52C9.7 Protein F52C9.7 0.020
pbrm-1 Protein PBRM-1 0.020
chd-7 Protein CHD-7 0.020
Y18H1A.2 Protein Y18H1A.2 0.020
T23H2.3 Protein T23H2.3 0.020
R90.1 Protein R90.1 0.020
rpn-3 Protein RPN-3 0.020
Y55D9A.2 Protein Y55D9A.2 0.019
rbg-2 Protein RBG-2 0.019
rsp-5 Protein RSP-5 0.019
CELE_F54D5.5 Protein F54D5.5 0.019
set-2 Protein SET-2 0.019
R12E2.1 Protein R12E2.1 0.019
rnp-3 Protein RNP-3 0.018
dbr-1 Protein DBR-1 0.018
rfp-1 Protein RFP-1 0.018
egl-18 Protein EGL-18 0.018
rpn-7 Protein RPN-7 0.018
ife-3 Protein IFE-3 0.018
pbs-2 Protein PBS-2 0.018
CELE_C01G10.8 Protein C01G10.8 0.018
gip-1 Protein GIP-1 0.018
swsn-2.2 Protein SWSN-2.2 0.018
ubc-9 Protein UBC-9 0.018
lin-36 Protein LIN-36 0.017
ZK1127.6 Protein ZK1127.6 0.017
lin-23 Protein LIN-23 0.017
F25D7.4 Protein F25D7.4 0.017
CELE_B0238.11 Protein B0238.11 0.017
Y92H12BR.2 Protein Y92H12BR.2 0.017
cars-1 Protein CARS-1 0.017
ZK177.1 Protein ZK177.1 0.017
CELE_C25A1.4 Protein C25A1.4 0.017
CELE_Y39B6A.10 Protein Y39B6A.10 0.017
tiar-1 Protein TIAR-1 0.017
cst-2 Protein CST-2 0.016
C17G10.2 Protein C17G10.2 0.016
C07A9.2 Protein C07A9.2 0.016
npp-21 Protein NPP-21 0.016
npp-1 Protein NPP-1 0.016
emr-1 Protein EMR-1 0.016
CELE_Y106G6D.7 Protein Y106G6D.7 0.016
rnp-5 Protein RNP-5 0.016
pas-3 Protein PAS-3 0.016
ZK1098.1 Protein ZK1098.1 0.016
C03C10.4 Protein C03C10.4 0.016
scc-3 Protein SCC-3 0.016
T28D9.1 Protein T28D9.1 0.016
ztf-28 Protein ZTF-28 0.016
CELE_T26A8.4 Protein T26A8.4 0.015
F57B10.9 Protein F57B10.9 0.015
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Danio rerio
Name Description Probability Func Analog Organism
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Drosophila melanogaster
Name Description Probability Func Analog Organism
Taf4 TBP-associated factor 4 0.547
Nipped-A CG33554 gene product from transcript CG33554-RE 0.363
Pros26.4 Proteasome 26S subunit subunit 4 ATPase 0.342
Pros45 CG1489 gene product from transcript CG1489-RA 0.327
Lam Lamin 0.254
Taf12 TBP-associated factor 12 0.248
CG32685 CG32685 gene product from transcript CG32685-RC 0.245
Rpn11 CG18174 gene product from transcript CG18174-RA 0.197
Rpt3 CG16916 gene product from transcript CG16916-RA 0.188
tra2 transformer 2 0.167
Sry-delta Serendipity delta 0.157
Bap55 Brahma associated protein 55kD 0.152
Rpn9 CG10230 gene product from transcript CG10230-RB 0.140
MED17 Mediator complex subunit 17 0.137
Taf8 TBP-associated factor 8 0.126
MED31 Mediator complex subunit 31 0.125
Rpn7 CG5378 gene product from transcript CG5378-RA 0.105
Rcd1 Reduction in Cnn dots 1 0.100
lwr lesswright 0.085
CG5384 CG5384 gene product from transcript CG5384-RA 0.083
Tbp-1 Tat-binding protein-1 0.081
Taf10b TBP-associated factor 10b 0.080
BRWD3 CG31132 gene product from transcript CG31132-RA 0.079
CG8159 CG8159 gene product from transcript CG8159-RB 0.077
CG15141 CG15141 gene product from transcript CG15141-RA 0.076
Topors Topoisomerase I-interacting protein 0.076
CG1792 CG1792 gene product from transcript CG1792-RA 0.073
Elongin-C Elongin C 0.065
Tbp TATA binding protein 0.063
MED20 Mediator complex subunit 20 0.063
Prosalpha7 Proteasome alpha7 subunit 0.063
Mov34 CG3416 gene product from transcript CG3416-RA 0.055
CG4709 CG4709 gene product from transcript CG4709-RA 0.054
MED11 Mediator complex subunit 11 0.054
Rpt4 CG3455 gene product from transcript CG3455-RA 0.051
14-3-3epsilon CG31196 gene product from transcript CG31196-RA 0.049
CG6654 CG6654 gene product from transcript CG6654-RA 0.049
CG7386 CG7386 gene product from transcript CG7386-RA 0.049
Dcp2 Decapping protein 2 0.046
CG10139 CG10139 gene product from transcript CG10139-RA 0.046
Rpn1 CG7762 gene product from transcript CG7762-RA 0.041
CG12393 CG12393 gene product from transcript CG12393-RB 0.041
MED6 Mediator complex subunit 6 0.040
Prosbeta7 Proteasome beta7 subunit 0.039
CG1103 CG1103 gene product from transcript CG1103-RA 0.039
emb embargoed 0.038
Pitslre CG4268 gene product from transcript CG4268-RA 0.038
mxc multi sex combs 0.037
U2af38 U2 small nuclear riboprotein auxiliary factor 38 0.037
CG13349 CG13349 gene product from transcript CG13349-RA 0.036
klu klumpfuss 0.035
pad poils au dos 0.034
Rpn12 CG4157 gene product from transcript CG4157-RA 0.032
CG11188 CG11188 gene product from transcript CG11188-RA 0.032
Taf1 TBP-associated factor 1 0.031
Snr1 Snf5-related 1 0.029
JhI-1 Juvenile hormone-inducible protein 1 0.028
MED10 Mediator complex subunit 10 0.027
CG10414 CG10414 gene product from transcript CG10414-RA 0.027
Sry-beta Serendipity beta 0.026
CG14551 CG14551 gene product from transcript CG14551-RA 0.026
bab2 CG9102 gene product from transcript CG9102-RA 0.025
CG6617 CG6617 gene product from transcript CG6617-RA 0.025
CG6015 CG6015 gene product from transcript CG6015-RA 0.025
Pcaf CG4107 gene product from transcript CG4107-RA 0.024
CG18764 CG18764 gene product from transcript CG18764-RA 0.024
CG9293 CG9293 gene product from transcript CG9293-RB 0.024
Txl Thioredoxin-like 0.024
eIF2B-beta CG2677 gene product from transcript CG2677-RA 0.024
CG6506 CG6506 gene product from transcript CG6506-RA 0.023
l(3)73Ah lethal (3) 73Ah 0.023
Neos Neosin 0.023
sns sticks and stones 0.023
Rpn6 Proteasome p44.5 subunit 0.023
CG12321 CG12321 gene product from transcript CG12321-RA 0.022
Rpn2 CG11888 gene product from transcript CG11888-RA 0.022
CG5146 CG5146 gene product from transcript CG5146-RA 0.022
CG3508 CG3508 gene product from transcript CG3508-RB 0.022
wek weckle 0.021
CG10630 CG10630 gene product from transcript CG10630-RA 0.021
Slu7 CG1420 gene product from transcript CG1420-RA 0.021
Cul-4 Cullin-4 0.020
His2Av Histone H2A variant 0.020
CG13472 CG13472 gene product from transcript CG13472-RA 0.020
CG11560 CG11560 gene product from transcript CG11560-RA 0.020
Xe7 CG2179 gene product from transcript CG2179-RA 0.019
MED4 Mediator complex subunit 4 0.019
dwg deformed wings 0.019
CG7375 CG7375 gene product from transcript CG7375-RA 0.018
CG15439 CG15439 gene product from transcript CG15439-RA 0.018
Pros26 Proteasome 26kD subunit 0.018
p47 CG11139 gene product from transcript CG11139-RA 0.018
Rpn5 CG1100 gene product from transcript CG1100-RA 0.018
CG2709 CG2709 gene product from transcript CG2709-RA 0.017
Dpck Dephospho-CoA kinase 0.017
MED23 Mediator complex subunit 23 0.017
Sin Sex-lethal interactor 0.017
CstF-64 Cleavage stimulation factor 64 kilodalton subunit 0.017
CG4854 CG4854 gene product from transcript CG4854-RA 0.017
CG14182 CG14182 gene product from transcript CG14182-RA 0.017
Loading network...
Mus musculus
Name Description Probability Func Analog Organism
Shh sonic hedgehog 0.943
Psmc3 proteasome (prosome, macropain) 26S subunit, ATPase 3 0.627
Hand1 heart and neural crest derivatives expressed transcript 1 0.602
Hand2 heart and neural crest derivatives expressed transcript 2 0.518
Psmd4 proteasome (prosome, macropain) 26S subunit, non-ATPase, 4 0.496
Fgf8 fibroblast growth factor 8 0.435
Gli2 GLI-Kruppel family member GLI2 0.430
Gata4 GATA binding protein 4 0.317
Pax8 paired box gene 8 0.271
Nfkb2 nuclear factor of kappa light polypeptide gene enhancer in B-cells 2, p49/p100 0.258
Ptpn11 protein tyrosine phosphatase, non-receptor type 11 0.246
Tcf3 transcription factor 3 0.207
Wnt3a wingless-related MMTV integration site 3A 0.194
Vax1 ventral anterior homeobox containing gene 1 0.177
Sox9 SRY-box containing gene 9 0.169
Ikzf1 IKAROS family zinc finger 1 0.151
Nkx2-5 NK2 transcription factor related, locus 5 (Drosophila) 0.142
Tbx1 T-box 1 0.129
Dkk1 dickkopf homolog 1 (Xenopus laevis) 0.116
Foxc1 forkhead box C1 0.116
T brachyury 0.106
Psmb6 proteasome (prosome, macropain) subunit, beta type 6 0.100
Foxc2 forkhead box C2 0.098
Rarb retinoic acid receptor, beta 0.091
Stat2 signal transducer and activator of transcription 2 0.085
Nkx6-1 NK6 homeobox 1 0.078
Hoxd3 homeobox D3 0.076
Cd19 CD19 antigen 0.072
Cbfa2t3 core-binding factor, runt domain, alpha subunit 2, translocated to, 3 (human) 0.070
Tal1 T-cell acute lymphocytic leukemia 1 0.070
Pax2 paired box gene 2 0.070
Uba7 ubiquitin-like modifier activating enzyme 7 0.062
Tbx5 T-box 5 0.062
Tbp TATA box binding protein 0.061
Hoxd13 homeobox D13 0.059
Rxra retinoid X receptor alpha 0.058
Rarg retinoic acid receptor, gamma 0.057
Pitx2 paired-like homeodomain transcription factor 2 0.057
Bmp7 bone morphogenetic protein 7 0.056
Isg15 ISG15 ubiquitin-like modifier 0.054
Socs1 suppressor of cytokine signaling 1 0.053
Gdnf glial cell line derived neurotrophic factor 0.053
Lhx3 LIM homeobox protein 3 0.053
Wnt4 wingless-related MMTV integration site 4 0.052
Gata5 GATA binding protein 5 0.050
Tbcb tubulin folding cofactor B 0.050
Ror2 receptor tyrosine kinase-like orphan receptor 2 0.049
Insm1 insulinoma-associated 1 0.049
En1 engrailed 1 0.047
Pou5f1 POU domain, class 5, transcription factor 1 0.047
Igdcc3 immunoglobulin superfamily, DCC subclass, member 3 0.046
Hoxa4 homeobox A4 0.046
Six6 sine oculis-related homeobox 6 homolog (Drosophila) 0.046
Myl2 myosin, light polypeptide 2, regulatory, cardiac, slow 0.045
Barx1 BarH-like homeobox 1 0.045
Barx2 BarH-like homeobox 2 0.045
Mesp1 mesoderm posterior 1 0.044
Lhx1 LIM homeobox protein 1 0.044
Trp63 transformation related protein 63 0.044
Ncoa6 nuclear receptor coactivator 6 0.043
Pax1 paired box gene 1 0.042
Lef1 lymphoid enhancer binding factor 1 0.042
Tgfb2 transforming growth factor, beta 2 0.041
Hmx3 H6 homeobox 3 0.041
Psmb9 proteasome (prosome, macropain) subunit, beta type 9 (large multifunctional peptidase 2) 0.041
Pou3f3 POU domain, class 3, transcription factor 3 0.041
Ctnnb1 catenin (cadherin associated protein), beta 1 0.040
Stat1 signal transducer and activator of transcription 1 0.039
Srebf2 sterol regulatory element binding factor 2 0.039
Foxn1 forkhead box N1 0.039
Gli3 GLI-Kruppel family member GLI3 0.039
Nfkb1 nuclear factor of kappa light polypeptide gene enhancer in B-cells 1, p105 0.039
Psmc2 proteasome (prosome, macropain) 26S subunit, ATPase 2 0.038
Tbx3 T-box 3 0.037
Gli1 GLI-Kruppel family member GLI1 0.037
Hoxa13 homeobox A13 0.037
Cct7 chaperonin containing Tcp1, subunit 7 (eta) 0.036
Foxe1 forkhead box E1 0.036
Sfpi1 SFFV proviral integration 1 0.035
Psma2 proteasome (prosome, macropain) subunit, alpha type 2 0.034
Ntf3 neurotrophin 3 0.034
Fgf15 fibroblast growth factor 15 0.034
Rnf2 ring finger protein 2 0.034
Tbx2 T-box 2 0.034
Map3k14 mitogen-activated protein kinase kinase kinase 14 0.033
Wnt1 wingless-related MMTV integration site 1 0.033
Gata6 GATA binding protein 6 0.031
Nkx3-2 NK3 homeobox 2 0.031
Pdx1 pancreatic and duodenal homeobox 1 0.031
Ccz1 CCZ1 vacuolar protein trafficking and biogenesis associated homolog (S. cerevisiae) 0.030
Wnt2b wingless related MMTV integration site 2b 0.030
Fgf3 fibroblast growth factor 3 0.030
Six5 sine oculis-related homeobox 5 homolog (Drosophila) 0.030
Nkx2-3 NK2 transcription factor related, locus 3 (Drosophila) 0.029
Trp53 transformation related protein 53 0.029
Relb avian reticuloendotheliosis viral (v-rel) oncogene related B 0.029
Rara retinoic acid receptor, alpha 0.028
Hoxd1 homeobox D1 0.028
Tap2 transporter 2, ATP-binding cassette, sub-family B (MDR/TAP) 0.028
Psmb7 proteasome (prosome, macropain) subunit, beta type 7 0.027
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Rattus norvegicus
Name Description Probability Func Analog Organism
Psmc1 proteasome (prosome, macropain) 26S subunit, ATPase, 1 0.983
Psmc5 proteasome (prosome, macropain) 26S subunit, ATPase, 5 0.978
Psmc2 proteasome (prosome, macropain) 26S subunit, ATPase 2 0.635
Psmd2 proteasome (prosome, macropain) 26S subunit, non-ATPase, 2 0.442
Psmd13 proteasome (prosome, macropain) 26S subunit, non-ATPase, 13 0.403
Psmd4 proteasome (prosome, macropain) 26S subunit, non-ATPase, 4 0.390
Psmd7 proteasome (prosome, macropain) 26S subunit, non-ATPase, 7 0.310
Vcp valosin-containing protein 0.307
Nsfl1c NSFL1 (p97) cofactor (p47) 0.213
Psmc3 proteasome (prosome, macropain) 26S subunit, ATPase 3 0.207
Cct3 chaperonin containing Tcp1, subunit 3 (gamma) 0.088
Psmc4 proteasome (prosome, macropain) 26S subunit, ATPase, 4 0.075
Psmd8 proteasome (prosome, macropain) 26S subunit, non-ATPase, 8 0.037
Prmt1 protein arginine methyltransferase 1 0.035
Psmd1 proteasome (prosome, macropain) 26S subunit, non-ATPase, 1 0.029
Psmd11 proteasome (prosome, macropain) 26S subunit, non-ATPase, 11 0.028
Kars lysyl-tRNA synthetase 0.024
Cct5 chaperonin containing Tcp1, subunit 5 (epsilon) 0.024
Nudc nuclear distribution gene C homolog (A. nidulans) 0.023
Cops6 COP9 constitutive photomorphogenic homolog subunit 6 (Arabidopsis) 0.023
Ufd1l ubiquitin fusion degradation 1 like (yeast) 0.022
LOC362855 P55 0.015
Psmb7 proteasome (prosome, macropain) subunit, beta type 7 0.015
Phax phosphorylated adaptor for RNA export 0.014
Cyp2a1 cytochrome P450, family 2, subfamily a, polypeptide 1 0.014
Pfdn2 prefoldin subunit 2 0.013
Plrg1 pleiotropic regulator 1, PRL1 homolog (Arabidopsis) 0.013
Plk1 polo-like kinase 1 (Drosophila) 0.013
Nfix nuclear factor I/X (CCAAT-binding transcription factor) 0.012
Phb prohibitin 0.012
Ppp2ca protein phosphatase 2, catalytic subunit, alpha isoform 0.012
Cct7 chaperonin containing Tcp1, subunit 7 (eta) 0.011
Rara retinoic acid receptor, alpha 0.011
Taf6 TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor 0.011
Exoc3 exocyst complex component 3 0.011
Nmt1 N-myristoyltransferase 1 0.010
Palm paralemmin 0.010
Aimp1 aminoacyl tRNA synthetase complex-interacting multifunctional protein 1 0.010
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Saccharomyces cerevisiae
Name Description Probability Func Analog Organism
SPT15 Spt15p 1.000
TAF10 Taf10p 0.999
TFG1 Tfg1p 0.997
TAF4 Taf4p 0.994
RPO21 Rpo21p 0.986
TAF6 Taf6p 0.982
RPB3 Rpb3p 0.981
SPT16 Spt16p 0.980
TFG2 Tfg2p 0.977
RPB4 Rpb4p 0.974
TAF5 Taf5p 0.966
TAF3 Taf3p 0.964
SRB6 Srb6p 0.961
TAF7 Taf7p 0.937
TAF8 Taf8p 0.928
TAF11 Taf11p 0.920
TAF12 Taf12p 0.916
SPT5 Spt5p 0.904
RPT6 Rpt6p 0.867
TAF9 Taf9p 0.860
TAF13 Taf13p 0.845
RPB11 Rpb11p 0.827
GAL11 Gal11p 0.806
SRB7 Srb7p 0.796
NUT2 Nut2p 0.795
TAF14 Taf14p 0.792
RGR1 Rgr1p 0.718
MOT1 Mot1p 0.693
SRB4 Srb4p 0.606
ADA2 Ada2p 0.575
RPB7 Rpb7p 0.531
SPN1 Spn1p 0.508
RTF1 Rtf1p 0.487
DST1 Dst1p 0.451
TAF1 Taf1p 0.450
SRB5 Srb5p 0.449
MED7 Med7p 0.440
RAD23 Rad23p 0.440
RPT4 Rpt4p 0.424
BUR6 Bur6p 0.382
RPB2 Rpb2p 0.372
RPT2 Rpt2p 0.302
SET2 Set2p 0.299
TOA1 Toa1p 0.290
TOA2 Toa2p 0.288
MED1 Med1p 0.288
MED4 Med4p 0.283
RPT1 Rpt1p 0.268
TFB4 Tfb4p 0.264
BRF1 Brf1p 0.256
CKA1 Cka1p 0.250
CDC73 Cdc73p 0.249
CKB1 Ckb1p 0.234
MED2 Med2p 0.230
MED6 Med6p 0.225
TFA2 Tfa2p 0.218
SRB2 Srb2p 0.216
TFA1 Tfa1p 0.209
TAF2 Taf2p 0.198
YTA7 Yta7p 0.191
RPN10 Rpn10p 0.167
SUA7 Sua7p 0.165
SUB1 Sub1p 0.152
PGD1 Pgd1p 0.143
TFB1 Tfb1p 0.141
RPB5 Rpb5p 0.140
RPN2 Rpn2p 0.127
CHD1 Chd1p 0.114
SIN4 Sin4p 0.111
RPB10 Rpb10p 0.106
SEM1 Sem1p 0.098
HHT1 Hht1p 0.098
STH1 Sth1p 0.095
NUT1 Nut1p 0.092
RPN9 Rpn9p 0.092
SPT7 Spt7p 0.090
SPT4 Spt4p 0.090
KAP114 Kap114p 0.087
SSL1 Ssl1p 0.086
RRT5 Rrt5p 0.083
CSE2 Cse2p 0.076
SKI3 Ski3p 0.075
CAB3 Cab3p 0.071
SPT8 Spt8p 0.069
NHP6B Nhp6bp 0.064
DLS1 Dls1p 0.064
NAB3 Nab3p 0.062
CTR9 Ctr9p 0.061
PAF1 Paf1p 0.061
RPN13 Rpn13p 0.058
REB1 Reb1p 0.056
SRD1 Srd1p 0.054
RPO26 Rpo26p 0.053
SAS4 Sas4p 0.052
YIL151C hypothetical protein 0.052
MCA1 Mca1p 0.052
LEU2 Leu2p 0.052
NGG1 Ngg1p 0.051
RPT5 Rpt5p 0.051
RPN7 Rpn7p 0.051