The network for 'regulation of rna metabolic process' in your query organism is displayed on the left, if relationships are supported by the integrated data. Moving any of the genes in that network will simultaneously update the homologs in the networks displayed to the right (if they exist). Additionally, hovering over any nodes will highlight the identified functionally similar homologs in the other networks. Last, the bar above the networks allows you to remove/add additional organisms. Simily drag and drop the organism names in the desired order.

Multiple Organisms

regulation of rna metabolic process

Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving RNA.

Danio rerio
Name Description Probability Func Analog Organism
gli1 GLI-Kruppel family member 1 0.999
fgf3 fibroblast growth factor 3 0.999
gata3 GATA-binding protein 3 0.996
runx2b runt-related transcription factor 2b 0.995
pax2a paired box gene 2a 0.992
chd chordin 0.991
prox1 prospero-related homeobox gene 1 0.987
rad21 RAD21 homolog (S. pombe) 0.983
eomesa eomesodermin homolog a 0.983
ndr2 nodal-related 2 0.976
notch3 notch homolog 3 0.975
lhx1a LIM homeobox 1a 0.971
spry4 sprouty (Drosophila) homolog 4 0.969
tbx6 T-box gene 6 0.967
ptf1a pancreas specific transcription factor, 1a 0.966
vent ventral expressed homeobox 0.962
pax8 paired box gene 8 0.955
foxi1 forkhead box I1 0.949
tll1 tolloid-like 1 0.943
isl1 islet1 0.942
six4b sine oculis homeobox homolog 4b 0.942
ntla no tail a 0.941
evx1 even-skipped homeobox 1 0.936
nkx2.2a NK2 transcription factor related 2a 0.922
tfap2a transcription factor AP-2 alpha 0.921
atoh1a atonal homolog 1a 0.920
wnt1 wingless-type MMTV integration site family, member 1 0.920
hand2 heart and neural crest derivatives expressed transcript 2 0.919
tbx16 T-box gene 16 0.918
notch1a notch homolog 1a 0.917
klf4a Kruppel-like transcription factor 4a 0.910
mll myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila) 0.909
rx3 retinal homeobox gene 3 0.908
dlx5a distal-less homeobox gene 5a 0.906
epha4a eph receptor A4a 0.900
lft1 lefty1 0.898
bmp4 bone morphogenetic protein 4 0.897
klf4 Kruppel-like factor 4 0.897
gata6 GATA-binding protein 6 0.888
lef1 lymphocyte enhancer binding factor 1 0.881
dla deltaA 0.880
foxa3 forkhead box A3 0.878
dact1 dapper homolog 1, antagonist of beta-catenin (xenopus) 0.875
her1 hairy-related 1 0.868
cry1a cryptochrome 1a 0.866
oprm1 opioid receptor, mu 1 0.866
hoxb5a homeo box B5a 0.862
pdlim7 PDZ and LIM domain 7 0.862
setd8a SET domain containing (lysine methyltransferase) 8a 0.858
ube2i ubiquitin-conjugating enzyme E2I 0.856
myod1 myogenic differentiation 1 0.855
mafba v-maf musculoaponeurotic fibrosarcoma oncogene family, protein B (avian) 0.852
cdh1 cadherin 1, epithelial 0.852
six3b sine oculis homeobox homolog 3b 0.852
snai1a snail homolog 1a (Drosophila) 0.852
tbx24 T-box 24 0.850
fn1 fibronectin 1 0.849
six1b sine oculis homeobox homolog 1b 0.849
mbnl2 muscleblind-like 2 (Drosophila) 0.848
jag2 jagged 2 0.845
ascl1a achaete-scute complex-like 1a (Drosophila) 0.839
six4a sine oculis homeobox homolog 4a 0.835
lhx6 LIM homeobox 6 0.832
robo3 roundabout homolog 3 0.831
eya1 eyes absent homolog 1 0.829
pax6b paired box gene 6b 0.826
isl2a islet2a 0.822
tgfb3 transforming growth factor, beta 3 0.818
eng1b engrailed 1b 0.818
kdrl kinase insert domain receptor like 0.816
her7 hairy and enhancer of split related-7 0.814
hoxd4a homeo box D4a 0.813
cdkn1c cyclin-dependent kinase inhibitor 1C (p57, Kip2) 0.812
sesn1 sestrin 1 0.809
khdrbs1a KH domain containing, RNA binding, signal transduction associated 1a 0.807
meis2.1 myeloid ecotropic viral integration site 2.1 0.803
hey1 hairy/enhancer-of-split related with YRPW motif 1 0.801
sox3 SRY-box containing gene 3 0.797
egr1 early growth response 1 0.795
runx2a runt-related transcription factor 2a 0.794
dlc deltaC 0.784
dlx2a distal-less homeobox gene 2a 0.782
eng2a engrailed 2a 0.780
egr2b early growth response 2b 0.779
wnt2bb wingless-type MMTV integration site family, member 2Bb 0.779
hhex hematopoietically expressed homeobox 0.779
sall1a sal-like 1a (Drosophila) 0.774
dkk1b dickkopf 1b 0.772
gata4 GATA-binding protein 4 0.770
bmper BMP binding endothelial regulator 0.763
tal1 T-cell acute lymphocytic leukemia 1 0.763
slc25a37 solute carrier family 25, member 37 0.761
crestin crestin 0.760
neurog1 neurogenin 1 0.752
tyr tyrosinase 0.740
fgfr3 fibroblast growth factor receptor 3 0.738
notch2 notch homolog 2 0.735
notum3 notum 3 0.734
fezf2 FEZ family zinc finger 2 0.734
wif1 wnt inhibitory factor 1 0.731
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Caenorhabditis elegans
Name Description Probability Func Analog Organism
pha-4 Protein PHA-4 0.996
egl-18 Protein EGL-18 0.995
vab-3 Protein VAB-3 0.986
eya-1 Protein EYA-1 0.985
mat-3 Protein MAT-3 0.924
egl-13 Protein EGL-13 0.917
asd-1 Protein ASD-1 0.917
nhr-49 Protein NHR-49 0.900
nhr-67 Protein NHR-67 0.895
hlh-2 Protein HLH-2 0.866
lin-35 Protein LIN-35 0.863
nhr-2 Protein NHR-2 0.841
attf-2 Protein ATTF-2 0.833
cfim-2 Protein CFIM-2 0.833
zip-7 Protein ZIP-7 0.810
elt-6 Protein ELT-6 0.807
skp-1 Protein SKP-1 0.783
hcp-3 Protein HCP-3 0.777
daf-14 Protein DAF-14 0.769
ten-1 Protein TEN-1 0.749
F39B2.1 Protein F39B2.1 0.725
unc-37 Protein UNC-37 0.712
lin-11 Protein LIN-11 0.650
fkh-2 Protein FKH-2 0.639
his-31 Protein HIS-31 0.639
dcp-66 Protein DCP-66 0.639
D1081.8 Protein D1081.8 0.633
ceh-20 Protein CEH-20 0.619
his-1 Protein HIS-1 0.617
hil-2 Protein HIL-2 0.614
mbk-2 Protein MBK-2 0.611
T09B4.5 Protein T09B4.5 0.591
B0464.2 Protein B0464.2 0.588
set-2 Protein SET-2 0.579
lin-17 Protein LIN-17 0.553
his-16 Protein HIS-16 0.553
F08B4.7 Protein F08B4.7 0.546
his-5 Protein HIS-5 0.542
his-61 Protein HIS-61 0.532
patr-1 Protein PATR-1 0.532
zyg-1 Protein ZYG-1 0.528
unc-62 Protein UNC-62 0.523
scc-1 Protein SCC-1 0.521
egl-46 Protein EGL-46 0.516
ceh-27 Protein CEH-27 0.514
prp-3 Protein PRP-3 0.504
F13B12.1 Protein F13B12.1 0.493
F53E10.6 Protein F53E10.6 0.490
ztf-2 Protein ZTF-2 0.478
tag-298 Protein TAG-298 0.469
unc-6 Protein UNC-6 0.469
daf-1 Protein DAF-1 0.467
unc-52 Protein UNC-52 0.462
pbrm-1 Protein PBRM-1 0.460
let-60 Protein LET-60 0.455
Y48E1A.1 Protein Y48E1A.1 0.454
his-46 Protein HIS-46 0.452
T28D9.1 Protein T28D9.1 0.448
F53F10.2 Protein F53F10.2 0.440
pmk-1 Protein PMK-1 0.439
flh-2 Protein FLH-2 0.439
hrp-1 Protein HRP-1 0.437
R11A8.7 Protein R11A8.7 0.437
tbx-8 Protein TBX-8 0.429
npp-2 Protein NPP-2 0.417
let-418 Protein LET-418 0.402
mep-1 Protein MEP-1 0.400
his-64 Protein HIS-64 0.392
mix-1 Protein MIX-1 0.391
abl-1 Protein ABL-1 0.391
aap-1 Protein AAP-1 0.389
CELE_T26A8.4 Protein T26A8.4 0.384
set-1 Protein SET-1 0.384
pme-3 Protein PME-3 0.384
ceh-34 Protein CEH-34 0.384
pry-1 Protein PRY-1 0.383
unc-85 Protein UNC-85 0.383
hlh-1 Protein HLH-1 0.383
his-48 Protein HIS-48 0.380
rgs-7 Protein RGS-7 0.377
pis-1 Protein PIS-1 0.377
lag-1 Protein LAG-1 0.373
mls-2 Protein MLS-2 0.367
prp-21 Protein PRP-21 0.367
npp-22 Protein NPP-22 0.366
F40F4.7 Protein F40F4.7 0.366
sel-10 Protein SEL-10 0.365
pop-1 Protein POP-1 0.363
CELE_W03F9.10 Protein W03F9.10 0.363
cnd-1 Protein CND-1 0.363
htz-1 Protein HTZ-1 0.363
npp-7 Protein NPP-7 0.358
acin-1 Protein ACIN-1 0.355
CELE_C17E4.6 Protein C17E4.6 0.353
szy-20 Protein SZY-20 0.353
soc-2 Protein SOC-2 0.349
unc-73 Protein UNC-73 0.347
inx-13 Protein INX-13 0.343
rsp-1 Protein RSP-1 0.340
hda-3 Protein HDA-3 0.340
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Drosophila melanogaster
Name Description Probability Func Analog Organism
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Homo sapiens
Name Description Probability Func Analog Organism
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Mus musculus
Name Description Probability Func Analog Organism
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Rattus norvegicus
Name Description Probability Func Analog Organism
Junb jun B proto-oncogene 0.983
Btg2 BTG family, member 2 0.916
Tcfe2a transcription factor E2a 0.892
Ppp1r15a protein phosphatase 1, regulatory (inhibitor) subunit 15A 0.881
Egr1 early growth response 1 0.877
Nr4a3 nuclear receptor subfamily 4, group A, member 3 0.860
Dusp1 dual specificity phosphatase 1 0.858
Fos FBJ osteosarcoma oncogene 0.851
Jun Jun oncogene 0.849
Nfib nuclear factor I/B 0.795
Nr4a1 nuclear receptor subfamily 4, group A, member 1 0.778
Sp1 Sp1 transcription factor 0.774
Tgfbr2 transforming growth factor, beta receptor II 0.758
Cebpb CCAAT/enhancer binding protein (C/EBP), beta 0.744
Zfp36 zinc finger protein 36 0.743
Ppp1cc protein phosphatase 1, catalytic subunit, gamma isoform 0.732
Tcf4 transcription factor 4 0.691
Dlg4 discs, large homolog 4 (Drosophila) 0.688
Ywhae tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide 0.670
Cebpa CCAAT/enhancer binding protein (C/EBP), alpha 0.653
Sfpq splicing factor proline/glutamine rich (polypyrimidine tract binding protein associated) 0.648
Nr4a2 nuclear receptor subfamily 4, group A, member 2 0.629
Erbb4 v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian) 0.624
Fgr Gardner-Rasheed feline sarcoma viral (v-fgr) oncogene homolog 0.591
Gata6 GATA binding protein 6 0.589
Mll5 myeloid/lymphoid or mixed-lineage leukemia 5 (trithorax homolog, Drosophila) 0.586
Nfia nuclear factor I/A 0.584
Grin2d glutamate receptor, ionotropic, N-methyl D-aspartate 2D 0.578
Sf3b1 splicing factor 3b, subunit 1 0.576
Atf3 activating transcription factor 3 0.569
Prdm2 PR domain containing 2, with ZNF domain 0.566
Myh9 myosin, heavy chain 9, non-muscle 0.566
Mov10 Moloney leukemia virus 10 0.562
Ahr aryl hydrocarbon receptor 0.555
Eif4h eukaryotic translation initiation factor 4H 0.545
Met met proto-oncogene 0.535
Rap1b RAP1B, member of RAS oncogene family 0.534
Cd9 CD9 molecule 0.533
Casp2 caspase 2 0.528
Uncx UNC homeobox 0.523
Grin2b glutamate receptor, ionotropic, N-methyl D-aspartate 2B 0.513
Lnpep leucyl/cystinyl aminopeptidase 0.506
Nfya nuclear transcription factor-Y alpha 0.495
Hand2 heart and neural crest derivatives expressed 2 0.491
Ier2 immediate early response 2 0.481
Camk2n2 calcium/calmodulin-dependent protein kinase II inhibitor 2 0.480
Inhbc inhibin beta C 0.479
Id1 inhibitor of DNA binding 1 0.477
Prph2 peripherin 2 0.471
Hnrpd heterogeneous nuclear ribonucleoprotein D 0.470
Nup88 nucleoporin 88 0.467
Aqp2 aquaporin 2 (collecting duct) 0.467
Phf12 PHD finger protein 12 0.466
Myc myelocytomatosis oncogene 0.466
Ascl1 achaete-scute complex homolog 1 (Drosophila) 0.465
Bcl2 B-cell CLL/lymphoma 2 0.464
Pacs1 phosphofurin acidic cluster sorting protein 1 0.464
Pfkfb2 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2 0.458
Eif4enif1 eukaryotic translation initiation factor 4E nuclear import factor 1 0.457
Ehmt2 euchromatic histone lysine N-methyltransferase 2 0.456
Hprt1 hypoxanthine phosphoribosyltransferase 1 0.449
Homer1 homer homolog 1 (Drosophila) 0.448
Tnfrsf1a tumor necrosis factor receptor superfamily, member 1a 0.446
Dynll1 dynein light chain LC8-type 1 0.446
Nfkbia nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha 0.446
Dll3 delta-like 3 (Drosophila) 0.443
Ier3 immediate early response 3 0.443
Wbp11 WW domain binding protein 11 0.443
Psmc1 proteasome (prosome, macropain) 26S subunit, ATPase, 1 0.443
Ywhaz tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide 0.437
Adra2b adrenergic, alpha-2B-, receptor 0.436
Chrnb3 cholinergic receptor, nicotinic, beta 3 0.435
Mllt1 myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 1 0.432
Cct3 chaperonin containing Tcp1, subunit 3 (gamma) 0.431
Smad1 SMAD family member 1 0.431
Bat3 HLA-B-associated transcript 3 0.430
Sh3bp1 SH3-domain binding protein 1 0.430
Grk1 G protein-coupled receptor kinase 1 0.428
Psmc2 proteasome (prosome, macropain) 26S subunit, ATPase 2 0.424
Slc13a2 solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2 0.424
Ndst1 N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1 0.423
Gjb3 gap junction protein, beta 3 0.423
Htr5b 5-hydroxytryptamine (serotonin) receptor 5B 0.422
Hes1 hairy and enhancer of split 1 (Drosophila) 0.420
Ube2g1 ubiquitin-conjugating enzyme E2G 1 (UBC7 homolog, yeast) 0.418
Hmgb1 high mobility group box 1 0.408
Cxcr3 chemokine (C-X-C motif) receptor 3 0.407
Rnps1 ribonucleic acid binding protein S1 0.405
Trim28 tripartite motif-containing 28 0.400
Hoxb7 homeo box B7 0.399
Csda cold shock domain protein A 0.398
Tnrc6b trinucleotide repeat containing 6B 0.396
Jak2 Janus kinase 2 0.394
Ddr1 discoidin domain receptor tyrosine kinase 1 0.394
Itpkb inositol 1,4,5-trisphosphate 3-kinase B 0.393
Map3k3 mitogen activated protein kinase kinase kinase 3 0.392
Klf2 Kruppel-like factor 2 (lung) 0.391
Dlx5 distal-less homeobox 5 0.391
Ccnl1 cyclin L1 0.387
RGD1560612 similar to PHF21A protein 0.386
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Saccharomyces cerevisiae
Name Description Probability Func Analog Organism