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Mus musculus

10 genes annotated in mouse

Multi-species View

paraxial mesoderm morphogenesis

GO:0048340

The process in which the anatomical structures of the paraxial mesoderm are generated and organized.

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Known genes in the process in mouse Include functional analogs

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Gene Predictions

Click on a gene's description to view its network relationships with genes known to be involved in "paraxial mesoderm morphogenesis"

Show only novel predictions Show only unknown genes Highlight genes with functional analogs involved in "paraxial mesoderm morphogenesis" (in gray)

Name	Description	Probability	Func Analog Organism
Pax2	paired box gene 2	0.999
Shh	sonic hedgehog	0.996
Fgf8	fibroblast growth factor 8	0.994
Lhx1	LIM homeobox protein 1	0.981
Smad4	MAD homolog 4 (Drosophila)	0.980	Mouse
Ctnnb1	catenin (cadherin associated protein), beta 1	0.975
Pax8	paired box gene 8	0.971
Bmp4	bone morphogenetic protein 4	0.962
Gli3	GLI-Kruppel family member GLI3	0.960
Otx2	orthodenticle homolog 2 (Drosophila)	0.951
Rarg	retinoic acid receptor, gamma	0.907
Fgfr2	fibroblast growth factor receptor 2	0.882
Fgfr1	fibroblast growth factor receptor 1	0.858
Nog	noggin	0.845
Bmpr1a	bone morphogenetic protein receptor, type 1A	0.842
Smad6	MAD homolog 6 (Drosophila)	0.825	Mouse
Nkx2-1	NK2 homeobox 1	0.821
Nodal	nodal	0.735
Smad1	MAD homolog 1 (Drosophila)	0.713	Mouse
Tgfbr2	transforming growth factor, beta receptor II	0.703	Mouse
Wnt4	wingless-related MMTV integration site 4	0.700	Mouse
Foxa2	forkhead box A2	0.671	Mouse
Hoxa1	homeobox A1	0.643
Dkk1	dickkopf homolog 1 (Xenopus laevis)	0.632
Tbx1	T-box 1	0.581
Gdnf	glial cell line derived neurotrophic factor	0.564
Hes1	hairy and enhancer of split 1 (Drosophila)	0.548
Emx1	empty spiracles homolog 1 (Drosophila)	0.537
Hmx3	H6 homeobox 3	0.535
Eya1	eyes absent 1 homolog (Drosophila)	0.529
Gata6	GATA binding protein 6	0.524
Hoxa2	homeobox A2	0.520
Smo	smoothened homolog (Drosophila)	0.518
Rarb	retinoic acid receptor, beta	0.513
Tbx2	T-box 2	0.511
Acvr1	activin A receptor, type 1	0.501	Mouse
Hoxd3	homeobox D3	0.490
Hoxd11	homeobox D11	0.482
Gbx2	gastrulation brain homeobox 2	0.481
Lmx1b	LIM homeobox transcription factor 1 beta	0.478
Tcfap2a	transcription factor AP-2, alpha	0.475
Otx1	orthodenticle homolog 1 (Drosophila)	0.450
Wnt3a	wingless-related MMTV integration site 3A	0.445
Emx2	empty spiracles homolog 2 (Drosophila)	0.439
Mecom	MDS1 and EVI1 complex locus	0.413
Gata4	GATA binding protein 4	0.403
Tbx3	T-box 3	0.373
Hoxd9	homeobox D9	0.364
Foxc1	forkhead box C1	0.343
T	brachyury	0.340
Hoxb6	homeobox B6	0.333
En1	engrailed 1	0.319
Tgfbr1	transforming growth factor, beta receptor I	0.309	Mouse
Fgf10	fibroblast growth factor 10	0.296
Wnt7a	wingless-related MMTV integration site 7A	0.287	Mouse
Hoxa3	homeobox A3	0.273
Six1	sine oculis-related homeobox 1 homolog (Drosophila)	0.273
Pbx1	pre B-cell leukemia transcription factor 1	0.266
Msx1	homeobox, msh-like 1	0.255
Prrx2	paired related homeobox 2	0.247
Hoxa10	homeobox A10	0.242
Hoxc8	homeobox C8	0.236
Cdx1	caudal type homeobox 1	0.228
Hoxa11	homeobox A11	0.220
Apc	adenomatosis polyposis coli	0.219
Lgr4	leucine-rich repeat-containing G protein-coupled receptor 4	0.213
Foxf2	forkhead box F2	0.212
Fzd1	frizzled homolog 1 (Drosophila)	0.205
Foxf1a	forkhead box F1a	0.202
Pou3f3	POU domain, class 3, transcription factor 3	0.191
Smad3	MAD homolog 3 (Drosophila)	0.189
Dlx5	distal-less homeobox 5	0.189
Wnt1	wingless-related MMTV integration site 1	0.180	Mouse
Ror2	receptor tyrosine kinase-like orphan receptor 2	0.172
Wnt2b	wingless related MMTV integration site 2b	0.169	Mouse
Lmx1a	LIM homeobox transcription factor 1 alpha	0.163
Hic1	hypermethylated in cancer 1	0.162
Foxa1	forkhead box A1	0.161	Mouse
Sox7	SRY-box containing gene 7	0.155
Amh	anti-Mullerian hormone	0.152
Hoxd13	homeobox D13	0.150
Twist2	twist homolog 2 (Drosophila)	0.140
Pcdh12	protocadherin 12	0.137
Pitx2	paired-like homeodomain transcription factor 2	0.135
Aldh1a2	aldehyde dehydrogenase family 1, subfamily A2	0.134
Hand2	heart and neural crest derivatives expressed transcript 2	0.132
Foxd2	forkhead box D2	0.128	Mouse
Wnt6	wingless-related MMTV integration site 6	0.128	Mouse
Pitx1	paired-like homeodomain transcription factor 1	0.127
Eng	endoglin	0.124
Gli2	GLI-Kruppel family member GLI2	0.123
Fzd8	frizzled homolog 8 (Drosophila)	0.122
Msx2	homeobox, msh-like 2	0.122
Igdcc3	immunoglobulin superfamily, DCC subclass, member 3	0.121
Hoxa4	homeobox A4	0.121
Onecut1	one cut domain, family member 1	0.120
Tcf21	transcription factor 21	0.119
Fzd10	frizzled homolog 10 (Drosophila)	0.115
Vax1	ventral anterior homeobox containing gene 1	0.115
Tgfb2	transforming growth factor, beta 2	0.111
Hoxb5	homeobox B5	0.111
Sox3	SRY-box containing gene 3	0.110
Gnaq	guanine nucleotide binding protein, alpha q polypeptide	0.108
Hoxd10	homeobox D10	0.108
Wnt3	wingless-related MMTV integration site 3	0.106	Mouse
Pax6	paired box gene 6	0.103
Hoxa9	homeobox A9	0.097
Bmp7	bone morphogenetic protein 7	0.097
Bnc1	basonuclin 1	0.097
Rara	retinoic acid receptor, alpha	0.097
Hand1	heart and neural crest derivatives expressed transcript 1	0.097
Tlx3	T-cell leukemia, homeobox 3	0.095
Neurog1	neurogenin 1	0.093
Hoxb3	homeobox B3	0.093
Fgf3	fibroblast growth factor 3	0.085
Smad7	MAD homolog 7 (Drosophila)	0.084	Mouse
Tgfbr3	transforming growth factor, beta receptor III	0.083
Hmx1	H6 homeobox 1	0.080
Fzd7	frizzled homolog 7 (Drosophila)	0.080
Ptk7	PTK7 protein tyrosine kinase 7	0.078
Bmp2	bone morphogenetic protein 2	0.076
Vstm2b	V-set and transmembrane domain containing 2B	0.075
Myod1	myogenic differentiation 1	0.075
Nr5a1	nuclear receptor subfamily 5, group A, member 1	0.071
Foxb1	forkhead box B1	0.070
Alx4	aristaless-like homeobox 4	0.068
Ptpn14	protein tyrosine phosphatase, non-receptor type 14	0.067
Cyp26a1	cytochrome P450, family 26, subfamily a, polypeptide 1	0.067
Fgf15	fibroblast growth factor 15	0.067
Ror1	receptor tyrosine kinase-like orphan receptor 1	0.064
Efna4	ephrin A4	0.062
Arx	aristaless related homeobox	0.061
Ihh	Indian hedgehog	0.060
Six6	sine oculis-related homeobox 6 homolog (Drosophila)	0.060
Gli1	GLI-Kruppel family member GLI1	0.060
Wt1	Wilms tumor 1 homolog	0.059
Hoxa13	homeobox A13	0.059
Col13a1	collagen, type XIII, alpha 1	0.057
Rxra	retinoid X receptor alpha	0.056
Axin1	axin 1	0.056
Hoxd1	homeobox D1	0.056
Fgf4	fibroblast growth factor 4	0.055
Adra2b	adrenergic receptor, alpha 2b	0.055
Smad5	MAD homolog 5 (Drosophila)	0.054	Mouse
Bptf	bromodomain PHD finger transcription factor	0.054
Fzd4	frizzled homolog 4 (Drosophila)	0.053
Nkx1-2	NK1 transcription factor related, locus 2 (Drosophila)	0.052
Erbb2ip	Erbb2 interacting protein	0.052
Snai1	snail homolog 1 (Drosophila)	0.051
Nkx6-1	NK6 homeobox 1	0.049
Hsd11b2	hydroxysteroid 11-beta dehydrogenase 2	0.049
Six4	sine oculis-related homeobox 4 homolog (Drosophila)	0.049
Axin2	axin2	0.048
Chrd	chordin	0.048
Ednra	endothelin receptor type A	0.048
Foxl2	forkhead box L2	0.047	Mouse
Jag1	jagged 1	0.047
Hes5	hairy and enhancer of split 5 (Drosophila)	0.047
Ascl1	achaete-scute complex homolog 1 (Drosophila)	0.047
Map3k7	mitogen-activated protein kinase kinase kinase 7	0.047
BC024139	cDNA sequence BC024139	0.046
Pthlh	parathyroid hormone-like peptide	0.045
Sox2	SRY-box containing gene 2	0.044
Hoxd4	homeobox D4	0.044
Efnb1	ephrin B1	0.043
Hoxb13	homeobox B13	0.043
Pitx3	paired-like homeodomain transcription factor 3	0.042
Mycn	v-myc myelocytomatosis viral related oncogene, neuroblastoma derived (avian)	0.042
Pik3r1	phosphatidylinositol 3-kinase, regulatory subunit, polypeptide 1 (p85 alpha)	0.041
Hnf4a	hepatic nuclear factor 4, alpha	0.041
Emid2	EMI domain containing 2	0.041
Cldn3	claudin 3	0.040
Nos3	nitric oxide synthase 3, endothelial cell	0.040
Smad2	MAD homolog 2 (Drosophila)	0.040
Il11	interleukin 11	0.039
Hoxb9	homeobox B9	0.039
Apoa5	apolipoprotein A-V	0.039
Gpc3	glypican 3	0.038
Hoxc6	homeobox C6	0.038
Ntn3	netrin 3	0.037
Gsc	goosecoid homeobox	0.035
Lef1	lymphoid enhancer binding factor 1	0.035
Bcl2	B-cell leukemia/lymphoma 2	0.035
Ptger1	prostaglandin E receptor 1 (subtype EP1)	0.034
Six3	sine oculis-related homeobox 3 homolog (Drosophila)	0.034
Dhh	desert hedgehog	0.034
Col22a1	collagen, type XXII, alpha 1	0.033
Six2	sine oculis-related homeobox 2 homolog (Drosophila)	0.032
Wnt9a	wingless-type MMTV integration site 9A	0.032	Mouse
Efna2	ephrin A2	0.032
Prkg1	protein kinase, cGMP-dependent, type I	0.031
Sox17	SRY-box containing gene 17	0.031
Figla	folliculogenesis specific basic helix-loop-helix	0.031
Ctnna1	catenin (cadherin associated protein), alpha 1	0.031
Dmrt3	doublesex and mab-3 related transcription factor 3	0.030
Amhr2	anti-Mullerian hormone type 2 receptor	0.030	Mouse
Fgfr3	fibroblast growth factor receptor 3	0.030
BC057022	cDNA sequence BC057022	0.029
Cdx2	caudal type homeobox 2	0.029
Tead3	TEA domain family member 3	0.029
Fst	follistatin	0.029
Cdh1	cadherin 1	0.029
Hoxb2	homeobox B2	0.028
Hoxa5	homeobox A5	0.028
Gata3	GATA binding protein 3	0.028
BC021891	cDNA sequence BC021891	0.027
Pcsk5	proprotein convertase subtilisin/kexin type 5	0.027
Sox1	SRY-box containing gene 1	0.027
Uncx	UNC homeobox	0.027
Npas1	neuronal PAS domain protein 1	0.027
Tgfa	transforming growth factor alpha	0.027
Hif1a	hypoxia inducible factor 1, alpha subunit	0.027
Matn3	matrilin 3	0.026
Prrx1	paired related homeobox 1	0.026
Bik	BCL2-interacting killer	0.026
Sall3	sal-like 3 (Drosophila)	0.025
Epas1	endothelial PAS domain protein 1	0.025
Adra2a	adrenergic receptor, alpha 2a	0.025
Wnt11	wingless-related MMTV integration site 11	0.025	Mouse
Zfp771	zinc finger protein 771	0.025
Vegfa	vascular endothelial growth factor A	0.025
Pten	phosphatase and tensin homolog	0.025
Ece1	endothelin converting enzyme 1	0.025
Tbxa2r	thromboxane A2 receptor	0.024
Hnf1b	HNF1 homeobox B	0.024	Mouse
Lhx5	LIM homeobox protein 5	0.024
Hoxb1	homeobox B1	0.024
Sh3pxd2a	SH3 and PX domains 2A	0.024
Fzd6	frizzled homolog 6 (Drosophila)	0.024
Nr2e1	nuclear receptor subfamily 2, group E, member 1	0.023
Mesp1	mesoderm posterior 1	0.023
Hoxb4	homeobox B4	0.023
Ager	advanced glycosylation end product-specific receptor	0.023
Foxq1	forkhead box Q1	0.023	Mouse
Ascl2	achaete-scute complex homolog 2 (Drosophila)	0.023
Gpr50	G-protein-coupled receptor 50	0.022
Fgf17	fibroblast growth factor 17	0.022
Lyzl4	lysozyme-like 4	0.021
Atp7a	ATPase, Cu++ transporting, alpha polypeptide	0.021
Sim2	single-minded homolog 2 (Drosophila)	0.021
Barx1	BarH-like homeobox 1	0.021
Hoxd8	homeobox D8	0.021
Fgfr4	fibroblast growth factor receptor 4	0.021
Efnb2	ephrin B2	0.021
Zfp503	zinc finger protein 503	0.020
Lhcgr	luteinizing hormone/choriogonadotropin receptor	0.020
Myl7	myosin, light polypeptide 7, regulatory	0.020
Cldn6	claudin 6	0.020
Sema5a	sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A	0.020
Hes2	hairy and enhancer of split 2 (Drosophila)	0.020
Inhbb	inhibin beta-B	0.019
Cyp26c1	cytochrome P450, family 26, subfamily c, polypeptide 1	0.019
Wnt10b	wingless related MMTV integration site 10b	0.019	Mouse
Sox9	SRY-box containing gene 9	0.019
Btbd17	BTB (POZ) domain containing 17	0.019
Socs1	suppressor of cytokine signaling 1	0.019
Gdf11	growth differentiation factor 11	0.019
Pou3f2	POU domain, class 3, transcription factor 2	0.019
Plac1	placental specific protein 1	0.018
Pax9	paired box gene 9	0.018
Pax1	paired box gene 1	0.018
Cdkn2a	cyclin-dependent kinase inhibitor 2A	0.018
Zic3	zinc finger protein of the cerebellum 3	0.018
Acvr2a	activin receptor IIA	0.018
Traf6	TNF receptor-associated factor 6	0.018
Hoxa7	homeobox A7	0.017
Papln	papilin, proteoglycan-like sulfated glycoprotein	0.017
Zfp36l2	zinc finger protein 36, C3H type-like 2	0.017
Nobox	NOBOX oogenesis homeobox	0.017
Pou3f1	POU domain, class 3, transcription factor 1	0.017
Psen1	presenilin 1	0.017
Fgf18	fibroblast growth factor 18	0.017
Ntf3	neurotrophin 3	0.017
Gpr27	G protein-coupled receptor 27	0.017
Lrp2	low density lipoprotein receptor-related protein 2	0.017
Pdgfra	platelet derived growth factor receptor, alpha polypeptide	0.017
Lama1	laminin, alpha 1	0.017
Bmpr2	bone morphogenic protein receptor, type II (serine/threonine kinase)	0.016	Mouse
Mnx1	motor neuron and pancreas homeobox 1	0.016
Pknox1	Pbx/knotted 1 homeobox	0.016
Wnt5b	wingless-related MMTV integration site 5B	0.016	Mouse
Ptk2	PTK2 protein tyrosine kinase 2	0.016
Neurog3	neurogenin 3	0.016
Fgf2	fibroblast growth factor 2	0.016
Gipc3	GIPC PDZ domain containing family, member 3	0.016
Foxe3	forkhead box E3	0.016	Mouse
Dlg1	discs, large homolog 1 (Drosophila)	0.016
Tbx4	T-box 4	0.015
Foxh1	forkhead box H1	0.015
Itih1	inter-alpha trypsin inhibitor, heavy chain 1	0.015
Skor1	SKI family transcriptional corepressor 1	0.015
Lbx2	ladybird homeobox homolog 2 (Drosophila)	0.015
Slc32a1	solute carrier family 32 (GABA vesicular transporter), member 1	0.014
Tcfap2c	transcription factor AP-2, gamma	0.014
Zbtb7c	zinc finger and BTB domain containing 7C	0.014
Cldn8	claudin 8	0.014
Gata2	GATA binding protein 2	0.014
Tcl1	T-cell lymphoma breakpoint 1	0.014
Ribc2	RIB43A domain with coiled-coils 2	0.014
Rsph6a	radial spoke head 6 homolog A (Chlamydomonas)	0.014
Slc7a2	solute carrier family 7 (cationic amino acid transporter, y+ system), member 2	0.014
Rdh10	retinol dehydrogenase 10 (all-trans)	0.014
Glra1	glycine receptor, alpha 1 subunit	0.014
Wls	wntless homolog (Drosophila)	0.013
Yap1	yes-associated protein 1	0.013
Nkx2-4	NK2 transcription factor related, locus 4 (Drosophila)	0.013
Rem1	rad and gem related GTP binding protein 1	0.013
Adra2c	adrenergic receptor, alpha 2c	0.013
Rax	retina and anterior neural fold homeobox	0.013
Pou4f3	POU domain, class 4, transcription factor 3	0.013
Aplnr	apelin receptor	0.013
Scube1	signal peptide, CUB domain, EGF-like 1	0.013
Dicer1	Dicer1, Dcr-1 homolog (Drosophila)	0.013
Rest	RE1-silencing transcription factor	0.013
Ephb2	Eph receptor B2	0.013
Foxd3	forkhead box D3	0.013	Mouse
Pou4f2	POU domain, class 4, transcription factor 2	0.013
Nkx2-5	NK2 transcription factor related, locus 5 (Drosophila)	0.013
Nr2f2	nuclear receptor subfamily 2, group F, member 2	0.012
Mixl1	Mix1 homeobox-like 1 (Xenopus laevis)	0.012
Irx3	Iroquois related homeobox 3 (Drosophila)	0.012
Phlda2	pleckstrin homology-like domain, family A, member 2	0.012
Esr2	estrogen receptor 2 (beta)	0.012
Evx1	even skipped homeotic gene 1 homolog	0.012
Cdh5	cadherin 5	0.012
Lrp6	low density lipoprotein receptor-related protein 6	0.012
Pax3	paired box gene 3	0.012
2610109H07Rik	RIKEN cDNA 2610109H07 gene	0.012
Prx	periaxin	0.012
Ttc7	tetratricopeptide repeat domain 7	0.012
Hoxb8	homeobox B8	0.012
Lrp5	low density lipoprotein receptor-related protein 5	0.012
Irx1	Iroquois related homeobox 1 (Drosophila)	0.012
Atoh1	atonal homolog 1 (Drosophila)	0.011
Nkx2-3	NK2 transcription factor related, locus 3 (Drosophila)	0.011
Stat5b	signal transducer and activator of transcription 5B	0.011
Evx2	even skipped homeotic gene 2 homolog	0.011
Hoxc5	homeobox C5	0.011
Nkx3-2	NK3 homeobox 2	0.011
Emp2	epithelial membrane protein 2	0.011
Wnt8b	wingless related MMTV integration site 8b	0.011	Mouse
Dlx1	distal-less homeobox 1	0.011
Ern2	endoplasmic reticulum (ER) to nucleus signalling 2	0.011
Efna5	ephrin A5	0.011
Hes3	hairy and enhancer of split 3 (Drosophila)	0.011
Sult5a1	sulfotransferase family 5A, member 1	0.011
3110079O15Rik	RIKEN cDNA 3110079O15 gene	0.011
Grem1	gremlin 1	0.011
Tnfrsf11a	tumor necrosis factor receptor superfamily, member 11a	0.011
Gsx1	GS homeobox 1	0.011
Bhlha9	basic helix-loop-helix family, member a9	0.011
Prdm6	PR domain containing 6	0.011
Cabp7	calcium binding protein 7	0.011
Cdh6	cadherin 6	0.011
Tmem132e	transmembrane protein 132E	0.010
Slc26a5	solute carrier family 26, member 5	0.010
Hoxc4	homeobox C4	0.010
Hs3st3a1	heparan sulfate (glucosamine) 3-O-sulfotransferase 3A1	0.010
Smurf1	SMAD specific E3 ubiquitin protein ligase 1	0.010
Kremen2	kringle containing transmembrane protein 2	0.010
Hnf1a	HNF1 homeobox A	0.010
Sp5	trans-acting transcription factor 5	0.010
Irx4	Iroquois related homeobox 4 (Drosophila)	0.010
Tmprss2	transmembrane protease, serine 2	0.010
Crb2	crumbs homolog 2 (Drosophila)	0.010