IMP

Process View

Danio rerio

4 genes annotated in zebrafish

mrna stabilization

Prevention of degradation of mRNA molecules. In the absence of compensating changes in other processes, the slowing of mRNA degradation can result in an overall increase in the population of active mRNA molecules.

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Known genes in the process in zebrafish Include functional analogs

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Gene Predictions

Click on a gene's description to view its network relationships with genes known to be involved in "mrna stabilization"

Show only novel predictions Show only unknown genes Highlight genes with functional analogs involved in "mrna stabilization" (in gray)

Name	Description	Probability	Func Analog Organism
hnrnpab	heterogeneous nuclear ribonucleoprotein A/B	0.322
zgc:77366	zgc:77366	0.195
eif4a1a	eukaryotic translation initiation factor 4A, isoform 1A	0.160
srsf2	serine/arginine-rich splicing factor 2	0.134
sfrs3b	splicing factor, arginine/serine-rich 3b	0.130
cirbp	cold inducible RNA binding protein	0.117	Human
setb	SET translocation (myeloid leukemia-associated) B	0.114
hnrnpa0	heterogeneous nuclear ribonucleoprotein A0	0.110	Mouse
zgc:112425	zgc:112425	0.107	Human
usp10	ubiquitin specific peptidase 10	0.098
ef1a	elongation factor 1-alpha	0.096
boc	brother of CDO	0.096
mapre1	microtubule-associated protein, RP/EB family, member 1	0.086
khdrbs1a	KH domain containing, RNA binding, signal transduction associated 1a	0.076	Zebrafish
anp32e	acidic (leucine-rich) nuclear phosphoprotein 32 family, member E	0.074
hnrnpa0l	heterogeneous nuclear ribonucleoprotein A0, like	0.068
hnrnph1l	heterogeneous nuclear ribonucleoprotein H1, like	0.064
dld	deltaD	0.051
dla	deltaA	0.050
efnb3b	ephrin B3b	0.049
prmt1	protein arginine methyltransferase 1	0.049
arf2	ADP-ribosylation factor 2	0.046
ddx5	DEAD (Asp-Glu-Ala-Asp) box polypeptide 5	0.044
org	oogenesis-related gene	0.043
ptbp1a	polypyrimidine tract binding protein 1a	0.041
ywhae1	tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide 1	0.039
axin1	axin 1	0.039
dag1	dystroglycan 1	0.039
pl10	pl10	0.037
ube2v2	ubiquitin-conjugating enzyme E2 variant 2	0.036
ntn2	netrin 2	0.036
api5	apoptosis inhibitor 5	0.036
etf1	eukaryotic translation termination factor 1	0.035
calm3b	calmodulin 3b (phosphorylase kinase, delta)	0.035
smarcc1a	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1a	0.035
cnih	cornichon homolog (Drosophila)	0.034
acvr1l	activin A receptor, type I like	0.034
trim71	tripartite motif-containing 71	0.034
wu:fc24e06	wu:fc24e06	0.033
gli1	GLI-Kruppel family member 1	0.032	Zebrafish
cdh2	cadherin 2, neuronal	0.032
zgc:66100	zgc:66100	0.032
snrnp70	small nuclear ribonucleoprotein 70 (U1)	0.031
prpf8	pre-mRNA processing factor 8	0.031
wu:fk48d07	wu:fk48d07	0.029
xrn2	5'-3' exoribonuclease 2	0.029
tcf7l1a	transcription factor 7-like 1a (T-cell specific, HMG-box)	0.029
srsf1a	serine/arginine-rich splicing factor 1a	0.028
oxsr1a	oxidative-stress responsive 1a	0.028
cxcr4b	chemokine (C-X-C motif), receptor 4b	0.028
hmga1a	high mobility group AT-hook 1a	0.027
pbx4	pre-B-cell leukemia transcription factor 4	0.027
dzip1	DAZ interacting protein 1	0.027
nkain1	Na+/K+ transporting ATPase interacting 1	0.027
hmgb1b	high-mobility group box 1b	0.026
kpna3	karyopherin (importin) alpha 3	0.026
zgc:77052	zgc:77052	0.025
marcksb	myristoylated alanine rich protein kinase C substrate b	0.025
ilf3b	interleukin enhancer binding factor 3b	0.025
tia1l	cytotoxic granule-associated RNA binding protein 1, like	0.025
kop	askopos	0.025
wu:fc57f07	wu:fc57f07	0.025
mmgt1	membrane magnesium transporter 1	0.025
ube2g2	ubiquitin-conjugating enzyme E2G 2	0.024
phrf1	PHD and ring finger domains 1	0.024
ube2na	ubiquitin-conjugating enzyme E2Na	0.024
clic4	chloride intracellular channel 4	0.023
wnt11	wingless-type MMTV integration site family, member 11	0.023
cisd2	CDGSH iron sulfur domain 2	0.022
zgc:158856	zgc:158856	0.022
prpf38b	PRP38 pre-mRNA processing factor 38 (yeast) domain containing B	0.022
prpsap2	phosphoribosyl pyrophosphate synthetase-associated protein 2	0.022
lmnb1	lamin B1	0.022
seta	SET translocation (myeloid leukemia-associated) A	0.022
baz1a	bromodomain adjacent to zinc finger domain, 1A	0.022
fbn2b	fibrillin 2b	0.022
fbxw11b	F-box and WD-40 domain protein 11b	0.022
tcf7l2	transcription factor 7-like 2 (T-cell specific, HMG-box)	0.021
yth2	YTH domain family 2	0.021
piwil1	piwi-like 1 (Drosophila)	0.021
ck2b	casein kinase 2 beta	0.021
srsf4	serine/arginine-rich splicing factor 4	0.020
sumo3a	SMT3 suppressor of mif two 3 homolog 3a	0.020
ppp2r2d	protein phosphatase 2, regulatory subunit B, delta isoform	0.020
hdac1	histone deacetylase 1	0.020
igf2bp3	insulin-like growth factor 2 mRNA binding protein 3	0.020
ywhaqa	tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide a	0.020
si:ch211-51e12.7	si:ch211-51e12.7	0.019
ewsr1a	Ewing sarcoma breakpoint region 1a	0.019
ppp2r1a	protein phosphatase 2 (formerly 2A), regulatory subunit A (PR 65), alpha isoform	0.019
bzw1a	basic leucine zipper and W2 domains 1a	0.019
hnrpl	heterogeneous nuclear ribonucleoprotein L	0.019
zgc:193933	zgc:193933	0.019
spry4	sprouty (Drosophila) homolog 4	0.019
itga5	integrin, alpha 5 (fibronectin receptor, alpha polypeptide)	0.018
hmgb1a	high-mobility group box 1a	0.018
nanos3	nanos homolog 3	0.018
smarce1	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1	0.018
ube2d2	ubiquitin-conjugating enzyme E2D 2 (UBC4/5 homolog, yeast)	0.018
midn	midnolin	0.018
rbm4.2	RNA binding motif protein 4.2	0.018
eif4g2a	eukaryotic translation initiation factor 4, gamma 2a	0.018
cnot6	CCR4-NOT transcription complex, subunit 6	0.018
zc3h15	zinc finger CCCH-type containing 15	0.018
waca	WW domain containing adaptor with coiled-coil a	0.018
hnrnpm	heterogeneous nuclear ribonucleoprotein M	0.018
dvl2	dishevelled, dsh homolog 2 (Drosophila)	0.017
tubb2c	tubulin, beta 2c	0.017
hdac3	histone deacetylase 3	0.017
wu:fb17g07	wu:fb17g07	0.017
smc1al	structural maintenance of chromosomes 1A, like	0.017
sulf1	sulfatase 1	0.017
fgfrl1a	fibroblast growth factor receptor-like 1a	0.017
per3	period homolog 3 (Drosophila)	0.017
luc7l	LUC7-like (S. cerevisiae)	0.017
btg1	B-cell translocation gene 1	0.017
slc25a5	solute carrier family 25 alpha, member 5	0.017
rassf8b	Ras association (RalGDS/AF-6) domain family 8b	0.017
lamb2	laminin, beta 2 (laminin S)	0.017
eif3s10	eukaryotic translation initiation factor 3, subunit 10 (theta)	0.016
hnrnpa1	heterogeneous nuclear ribonucleoprotein A1	0.016
khdrbs1b	KH domain containing, RNA binding, signal transduction associated 1b	0.016	Zebrafish
her12	hairy-related 12	0.016
plagl2	pleiomorphic adenoma gene-like 2	0.016
ptp4a1	protein tyrosine phosphatase type IVA, member 1	0.016
twist1a	twist1a	0.016
pycrl	pyrroline-5-carboxylate reductase-like	0.016
eif1b	eukaryotic translation initiation factor 1B	0.016
tardbpl	TAR DNA binding protein, like	0.016	Human
lhx2b	LIM homeobox 2b	0.015
btk	Bruton agammaglobulinemia tyrosine kinase	0.015
uck2a	uridine-cytidine kinase 2a	0.015
abcf2	ATP-binding cassette, sub-family F (GCN20), member 2	0.015
zgc:158345	zgc:158345	0.015
srsf1b	serine/arginine-rich splicing factor 1b	0.015
foxk2	forkhead box K2	0.015
arid4a	AT rich interactive domain 4A (RBP1-like)	0.015
acbd4	acyl-CoA binding domain containing 4	0.015
fxr2	fragile X mental retardation, autosomal homolog 2	0.015
msh6	mutS homolog 6 (E. coli)	0.015
sybu	syntabulin (syntaxin-interacting)	0.015
srsf6a	serine/arginine-rich splicing factor 6a	0.014
otul	OTU like protein	0.014
tcea1	transcription elongation factor A (SII), 1	0.014
hoxa9a	homeo box A9a	0.014
phb	prohibitin	0.014
ubr3	ubiquitin protein ligase E3 component n-recognin 3	0.014
buc	bucky ball	0.014
top1l	topoisomerase (DNA) I, like	0.014
hnrpdl	heterogeneous nuclear ribonucleoprotein D-like	0.014
ern1	endoplasmic reticulum to nucleus signaling 1	0.014
khsrp	KH-type splicing regulatory protein	0.014
ddx19	DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 19 (DBP5 homolog, yeast)	0.013
srrm1	serine/arginine repetitive matrix 1	0.013
cnot8	CCR4-NOT transcription complex, subunit 8	0.013
rbfox2	RNA binding protein, fox-1 homolog (C. elegans) 2	0.013
thoc2	THO complex 2	0.013
ap1g1	adaptor-related protein complex 1, gamma 1 subunit	0.013
myf6	myogenic factor 6	0.013
lamc1	laminin, gamma 1	0.013
plekhh1	pleckstrin homology domain containing, family H (with MyTH4 domain) member 1	0.013
dnajc5ga	DnaJ (Hsp40) homolog, subfamily C, member 5 gamma a	0.013
chrnd	cholinergic receptor, nicotinic, delta polypeptide	0.013
caprin1a	cell cycle associated protein 1a	0.013
dda1	DET1 and DDB1 associated 1	0.013
oaz2a	ornithine decarboxylase antizyme 2a	0.013
hbae1	hemoglobin alpha embryonic-1	0.013
wu:fi04f09	wu:fi04f09	0.013
zgc:66477	zgc:66477	0.013
atrx	alpha thalassemia/mental retardation syndrome X-linked homolog (human)	0.013
notch1a	notch homolog 1a	0.013
glulb	glutamate-ammonia ligase (glutamine synthase) b	0.013
eef2b	eukaryotic translation elongation factor 2b	0.013
tia1	cytotoxic granule-associated RNA binding protein 1	0.013
stac3	SH3 and cysteine rich domain 3	0.013
ilf2	interleukin enhancer binding factor 2	0.013
birc5b	baculoviral IAP repeat-containing 5B	0.012
gc3	guanylyl cyclase 3	0.012
zgc:55886	zgc:55886	0.012
slc25a3b	solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 3b	0.012
tuba8l	tubulin, alpha 8 like	0.012
cftr	cystic fibrosis transmembrane conductance regulator, ATP-binding cassette (sub-family C, member 7)	0.012
clasp2	cytoplasmic linker associated protein 2	0.012
zic1	zic family member 1 (odd-paired homolog, Drosophila)	0.012
tomm40	translocase of outer mitochondrial membrane 40 homolog (yeast)	0.012
hsd17b10	hydroxysteroid (17-beta) dehydrogenase 10	0.012
cand1	cullin-associated and neddylation-dissociated 1	0.012
ptch1	patched 1	0.012
chtopa	chromatin target of PRMT1a	0.012
scxa	scleraxis homolog A (mouse)	0.012
ptges3a	prostaglandin E synthase 3a (cytosolic)	0.012
zgc:174888	zgc:174888	0.012
tlk2	tousled-like kinase 2	0.012
lrmp	lymphoid-restricted membrane protein	0.012
ptch2	patched 2	0.012
si:ch211-254d18.3	si:ch211-254d18.3	0.012
asz1	ankyrin repeat, SAM and basic leucine zipper domain containing 1	0.012
cdv3	carnitine deficiency-associated gene expressed in ventricle 3	0.012
srsf11	serine/arginine-rich splicing factor 11	0.012
wdr82	WD repeat domain containing 82	0.012
fgfr2	fibroblast growth factor receptor 2	0.012
fn1	fibronectin 1	0.011
tuba8l2	tubulin, alpha 8 like 2	0.011
rbm4.3	RNA binding motif protein 4.3	0.011
tpm2	tropomyosin 2 (beta)	0.011
dysf	dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)	0.011
zgc:101761	zgc:101761	0.011
lrig1	leucine-rich repeats and immunoglobulin-like domains 1	0.011
ppp2cb	protein phosphatase 2 (formerly 2A), catalytic subunit, beta isoform	0.011
grn1	granulin 1	0.011
polr2b	polymerase (RNA) II (DNA directed) polypeptide B	0.011
wars	tryptophanyl-tRNA synthetase	0.011
hsp90a.1	heat shock protein 90-alpha 1	0.011
lamb1a	laminin, beta 1a	0.011
aldoaa	aldolase a, fructose-bisphosphate, a	0.011
zgc:152896	zgc:152896	0.011
rtf1	Rtf1, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)	0.011
smarca4	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4	0.011
ctnna	catenin (cadherin-associated protein), alpha	0.011
atp5ib	ATP synthase, H+ transporting, mitochondrial F0 complex, subunit e, duplicate b	0.011
pcbp2	poly(rC) binding protein 2	0.011
tbx24	T-box 24	0.011
LOC560943	hypothetical protein LOC560943	0.011
hnrnpl2	heterogeneous nuclear ribonucleoprotein L2	0.011
chd7	chromodomain helicase DNA binding protein 7	0.011
gpt2	glutamic pyruvate transaminase (alanine aminotransferase) 2	0.011
zgc:66326	zgc:66326	0.011
prdm5	PR domain containing 5	0.011
ube2i2	ubiquitin-conjugating enzyme E2I2	0.011
pob	partial optokinetic response b	0.011
smarcd1	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1	0.011
vangl2	vang-like 2 (van gogh, Drosophila)	0.011
mib	mind bomb	0.011
glud1b	glutamate dehydrogenase 1b	0.010
ccnt2b	cyclin T2b	0.010
mapk4	mitogen-activated protein kinase 4	0.010
gli2a	GLI-Kruppel family member GLI2a	0.010
znf346	zinc finger protein 346	0.010
si:ch211-262e15.1	si:ch211-262e15.1	0.010
impdh1b	inosine 5'-phosphate dehydrogenase 1b	0.010
wdr45l	wdr45 like	0.010
srp54	signal recognition particle 54	0.010
tmem161a	transmembrane protein 161A	0.010
zgc:110801	zgc:110801	0.010
mylka	myosin, light chain kinase a	0.010
hmga2	high mobility group AT-hook 2	0.010
hsp90ab1	heat shock protein 90, alpha (cytosolic), class B member 1	0.010
tra2a	transformer-2 alpha	0.010
btg3	B-cell translocation gene 3	0.010
ddx6	DEAD (Asp-Glu-Ala-Asp) box polypeptide 6	0.010
pufa	PUF (Pumilio/FBF) domain-containing A	0.010
tbx18	T-box 18	0.010
wasa	Wiskott-Aldrich syndrome (eczema-thrombocytopenia) a	0.010
zgc:63569	zgc:63569	0.010
pcf11	cleavage and polyadenylation factor subunit, homolog (S. cerevisiae)	0.010
vps26b	vacuolar protein sorting 26 homolog B	0.010
fetub	fetuin B	0.010
ppp1cab	protein phosphatase 1, catalytic subunit, alpha isoform b	0.010
srsf6b	serine/arginine-rich splicing factor 6b	0.010