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Danio rerio

26 genes annotated in zebrafish

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neuroepithelial cell differentiation

GO:0060563

The process in which epiblast cells acquire specialized features of neuroepithelial cells.

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Known genes in the process in zebrafish Include functional analogs

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Gene Predictions

Click on a gene's description to view its network relationships with genes known to be involved in "neuroepithelial cell differentiation"

Show only novel predictions Show only unknown genes Highlight genes with functional analogs involved in "neuroepithelial cell differentiation" (in gray)

Name	Description	Probability	Func Analog Organism
kita	kit receptor a	0.997
mitfa	microphthalmia-associated transcription factor a	0.975
sox10	SRY-box containing gene 10	0.972
mib	mind bomb	0.938
tfap2a	transcription factor AP-2 alpha	0.876
foxd3	forkhead box D3	0.874
tyr	tyrosinase	0.828
foxi1	forkhead box I1	0.773	Zebrafish
msxb	muscle segment homeobox B	0.691
slc24a5	solute carrier family 24, member 5	0.648
zgc:112329	zgc:112329	0.634
gdf6a	growth differentiation factor 6a	0.615
sc:d812	sc:d812	0.597
rx3	retinal homeobox gene 3	0.566
pmela	premelanosome protein a	0.557
prdm1a	PR domain containing 1a, with ZNF domain	0.491
hoxb3a	homeo box B3a	0.476
sox2	SRY-box containing gene 2	0.435	Zebrafish
hlxb9la	homeo box HB9 like a	0.425	Fly
vps39	vacuolar protein sorting 39 homolog (S. cerevisiae)	0.412
atp6v0ca	ATPase, H+ transporting, lysosomal, V0 subunit c, a	0.393
trpm7	transient receptor potential cation channel, subfamily M, member 7	0.377
sox7	SRY-box containing gene 7	0.353	Zebrafish
notch1a	notch homolog 1a	0.344
slc45a2	solute carrier family 45, member 2	0.335
foxa3	forkhead box A3	0.311	Zebrafish Fly
six4b	sine oculis homeobox homolog 4b	0.305
pitx2	paired-like homeodomain transcription factor 2	0.277
sox19a	SRY-box containing gene 19a	0.276	Zebrafish
kdr	kinase insert domain receptor (a type III receptor tyrosine kinase)	0.272	Zebrafish
gata3	GATA-binding protein 3	0.271
gata2a	GATA-binding protein 2a	0.263
erbb3b	v-erb-b2 erythroblastic leukemia viral oncogene homolog 3b	0.260
kcnj13	potassium inwardly-rectifying channel, subfamily J, member 13	0.253
tfap2e	transcription factor AP-2 epsilon	0.253
hoxd13a	homeo box D13a	0.229
dct	dopachrome tautomerase	0.227
hhex	hematopoietically expressed homeobox	0.217
sox3	SRY-box containing gene 3	0.206	Zebrafish
eya1	eyes absent homolog 1	0.196
msxc	muscle segment homeobox C	0.190
irx3a	iroquois homeobox protein 3a	0.190
six3a	sine oculis homeobox homolog 3a	0.177
si:ch211-235f6.2	si:ch211-235f6.2	0.176
sox1a	SRY-box containing gene 1a	0.166	Zebrafish
tp63	tumor protein p63	0.165
foxg1a	forkhead box G1a	0.158	Zebrafish
mitfb	microphthalmia-associated transcription factor b	0.151
jag1b	jagged 1b	0.149
ltk	leukocyte tyrosine kinase	0.132
gbx2	gastrulation brain homeo box 2	0.130
otx2	orthodenticle homolog 2	0.125
hmx4	H6 family homeobox 4	0.121
gata6	GATA-binding protein 6	0.120
mab21l2	mab-21-like 2	0.116
crb2a	crumbs homolog 2a	0.112
insm1a	insulinoma-associated 1a	0.109
erbb2	v-erb-b2 erythroblastic leukemia viral oncogene homolog 2, neuro/glioblastoma derived oncogene homolog	0.109
pax2a	paired box gene 2a	0.107
spon2a	spondin 2a, extracellular matrix protein	0.098
hand2	heart and neural crest derivatives expressed transcript 2	0.093
hoxd10a	homeo box D10a	0.093
mlphb	melanophilin b	0.093	Mouse
tyrp1	tyrosinase-related protein 1	0.093
slc4a1b	solute carrier family 4, anion exchanger, member 1b	0.091
zgc:162329	zgc:162329	0.091
pax6a	paired box gene 6a	0.088
mdkb	midkine-related growth factor b	0.088
hlxb9lb	homeo box HB9 like b	0.087	Fly
bhlhe22	basic helix-loop-helix family, member e22	0.087
hoxa10b	homeo box A10b	0.086
tfe3b	transcription factor binding to IGHM enhancer 3b	0.084	Zebrafish
jag2	jagged 2	0.081
etv2	ets variant gene 2	0.080
mafba	v-maf musculoaponeurotic fibrosarcoma oncogene family, protein B (avian)	0.080
ptch1	patched 1	0.077
tfec	transcription factor EC	0.076
cx41.8	connexin 41.8	0.075
csf1ra	colony stimulating factor 1 receptor, a	0.075	Zebrafish
spi1	spleen focus forming virus (SFFV) proviral integration oncogene spi1	0.073
flt4	fms-related tyrosine kinase 4	0.072	Zebrafish
notch3	notch homolog 3	0.071
foxj1a	forkhead box J1a	0.069
tfeb	transcription factor EB	0.066
tp53	tumor protein p53	0.066
hoxd11a	homeo box D11a	0.065
isl1	islet1	0.064
isl2a	islet2a	0.060
zic4	zic family member 4	0.059
lmx1b.1	LIM homeobox transcription factor 1, beta 1	0.057
kdrl	kinase insert domain receptor like	0.057	Zebrafish
dusp5	dual specificity phosphatase 5	0.057
kctd15a	potassium channel tetramerisation domain containing 15a	0.055
tbx5a	T-box 5a	0.052
tal1	T-cell acute lymphocytic leukemia 1	0.052
pnp4a	purine nucleoside phosphorylase 4a	0.051
nkx2.2b	NK2 transcription factor related 2b	0.051
mpp5a	membrane protein, palmitoylated 5a (MAGUK p55 subfamily member 5a)	0.050
neurod	neurogenic differentiation	0.050
zic6	zic family member 6	0.048
cdx4	caudal type homeo box transcription factor 4	0.048
zic3	zic family member 3 heterotaxy 1 (odd-paired homolog, Drosophila)	0.047
spra	sepiapterin reductase a	0.047
hey1	hairy/enhancer-of-split related with YRPW motif 1	0.047
ednrb1	endothelin receptor B	0.046
fzd8a	frizzled homolog 8a	0.045
fgfrl1b	fibroblast growth factor receptor-like 1b	0.044
nr2e1	nuclear receptor subfamily 2, group E, member 1	0.042
vsx2	visual system homeobox 2	0.042
shha	sonic hedgehog a	0.041
cdh2	cadherin 2, neuronal	0.041
supt5h	suppressor of Ty 5 homolog (S. cerevisiae)	0.041
tbx1	T-box 1	0.041
fsta	follistatin a	0.040
wu:fv91b12	wu:fv91b12	0.039
otx1b	orthodenticle homolog 1b	0.039
foxa2	forkhead box A2	0.038	Zebrafish Fly
fgf24	fibroblast growth factor 24	0.038
zic2a	zic family member 2 (odd-paired homolog, Drosophila), a	0.038
gata4	GATA-binding protein 4	0.037
pax6b	paired box gene 6b	0.037
smad7	MAD, mothers against decapentaplegic homolog 7 (Drosophila)	0.036
foxa1	forkhead box A1	0.035	Zebrafish Fly
foxc1a	forkhead box C1a	0.035
tcf7l2	transcription factor 7-like 2 (T-cell specific, HMG-box)	0.034
dll4	delta-like 4 (Drosophila)	0.034
wnt4a	wingless-type MMTV integration site family, member 4a	0.033	Mouse
fgf8a	fibroblast growth factor 8 a	0.033	Mouse
snai1b	snail homolog 1b (Drosophila)	0.033
gata5	GATA-binding protein 5	0.033
pcdh10a	protocadherin 10a	0.033
cdh5	cadherin 5	0.032
phf21a	PHD finger protein 21A	0.031
irx1b	iroquois homeobox protein 1, b	0.030
tmem88a	transmembrane protein 88 a	0.030
atp6v0d1	ATPase, H+ transporting, V0 subunit D isoform 1	0.030
odz4	odd Oz/ten-m homolog 4	0.029
pax2b	paired box gene 2b	0.029
wnt2bb	wingless-type MMTV integration site family, member 2Bb	0.029
dlx3b	distal-less homeobox gene 3b	0.028
raraa	retinoic acid receptor, alpha a	0.028
sall1a	sal-like 1a (Drosophila)	0.028
bmp4	bone morphogenetic protein 4	0.028
mnx1	motor neuron and pancreas homeobox 1	0.027	Fly
crestin	crestin	0.027
nkx2.5	NK2 transcription factor related 5	0.027
meis3	myeloid ecotropic viral integration site 3	0.026
nf1a	neurofibromin 1a	0.026
kcnh2	potassium voltage-gated channel, subfamily H (eag-related), member 2	0.026
meis2.1	myeloid ecotropic viral integration site 2.1	0.026
lmx1b.2	LIM homeobox transcription factor 1, beta 2	0.025
hoxa9b	homeo box A9b	0.025
sema3h	semaphorin 3h	0.024
nr2e3	nuclear receptor subfamily 2, group E, member 3	0.024
dlb	deltaB	0.023
hoxd9a	homeo box D9a	0.023
esama	endothelial cell adhesion molecule a	0.023
sox4b	SRY-box containing gene 4b	0.023
lef1	lymphocyte enhancer binding factor 1	0.023
plcb3	phospholipase C, beta 3 (phosphatidylinositol-specific)	0.022
irx7	iroquois homeobox protein 7	0.022
ntla	no tail a	0.021
smarca4	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4	0.021
uxs1	UDP-glucuronic acid decarboxylase 1	0.021
eng2a	engrailed 2a	0.021
olig2	oligodendrocyte lineage transcription factor 2	0.021
hey2	hairy/enhancer-of-split related with YRPW motif 2	0.021
olfm2	olfactomedin 2	0.021
nr2f1a	nuclear receptor subfamily 2, group F, member 1a	0.021
pou1f1	POU domain, class 1, transcription factor 1	0.021
tbx2b	T-box 2b	0.021
rarga	retinoic acid receptor gamma a	0.021
hesx1	homeo box (expressed in ES cells) 1	0.020
dnmt7	DNA (cytosine-5-)-methyltransferase 7	0.020
trim8	tripartite motif-containing 8	0.020
tyrp1b	tyrosinase-related protein 1b	0.020	Mouse
zgc:162420	zgc:162420	0.020
tie2	endothelium-specific receptor tyrosine kinase 2	0.019
lhx5	LIM homeobox 5	0.019
olfm1a	olfactomedin 1a	0.019
six3b	sine oculis homeobox homolog 3b	0.019
hbbe1.1	hemoglobin beta embryonic-1.1	0.019
col2a1a	collagen type II, alpha-1a	0.019
cbfb	core-binding factor, beta subunit	0.019
ptprfb	protein tyrosine phosphatase, receptor type, f, b	0.018
hoxa2b	homeo box A2b	0.018
atp6v1h	ATPase, H+ transporting, lysosomal, V1 subunit H	0.018
vsx1	visual system homeobox 1 homolog, chx10-like	0.018
med12	mediator of RNA polymerase II transcription, subunit 12 homolog	0.018
ctnnd2b	catenin (cadherin-associated protein), delta 2b	0.018
grina	glutamate receptor, ionotropic, N-methyl D-aspartate-associated protein 1 (glutamate binding)	0.017
zgc:103530	zgc:103530	0.017
caspb	caspase b and caspase b-like	0.017
zic5	zic family member 5 (odd-paired homolog, Drosophila)	0.017
pcdh18a	protocadherin 18a	0.017
dlx4b	distal-less homeobox gene 4b	0.017
runx3	runt-related transcription factor 3	0.017
fbxw7	F-box and WD repeat domain containing 7	0.017
sox9a	SRY-box containing gene 9a	0.016	Zebrafish
lft1	lefty1	0.016
flt1	fms-related tyrosine kinase 1 (vascular endothelial growth factor/vascular permeability factor receptor)	0.016	Zebrafish
crx	cone-rod homeobox	0.016
eng1a	engrailed 1a	0.016
gpr182	G protein-coupled receptor 182	0.016
acvr1l	activin A receptor, type I like	0.016
hs3st1l2	heparan sulfate (glucosamine) 3-O-sulfotransferase 1-like 2	0.016
zic2b	zic family member 2 (odd-paired homolog, Drosophila) b	0.016
fn1	fibronectin 1	0.016
bmper	BMP binding endothelial regulator	0.015
tal2	T-cell acute lymphocytic leukemia 2	0.015
flh	floating head	0.015
zic1	zic family member 1 (odd-paired homolog, Drosophila)	0.015
hoxa11b	homeo box A11b	0.015
grhl2b	grainyhead-like 2b (Drosophila)	0.015
slc13a3	solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 3	0.014
foxe3	forkhead box E3	0.014	Zebrafish
atl1	atlastin GTPase 1	0.014
nkx6.2	NK6 transcription factor related, locus 2	0.014
dpysl2b	dihydropyrimidinase-like 2b	0.014
rspo3	R-spondin 3 homolog (Xenopus laevis)	0.014
otpb	orthopedia homolog b	0.014
fev	FEV (ETS oncogene family)	0.014
trpm2	transient receptor potential cation channel, subfamily M, member 2	0.014
gfi1.1	growth factor independent 1.1	0.013
utrn	utrophin	0.013
fgf3	fibroblast growth factor 3	0.013
esrrd	estrogen-related receptor delta	0.013
vwf	von Willebrand factor	0.013
olig4	oligodendrocyte transcription factor 4	0.013
btg1	B-cell translocation gene 1	0.013
barhl2	BarH-like 2	0.013
grem2	gremlin 2, cysteine knot superfamily	0.013
cdr2l	cerebellar degeneration-related protein 2-like	0.013
duox	dual oxidase	0.013
fgf22	fibroblast growth factor 22	0.012
prox1b	prospero-related homeobox gene 1b	0.012
mecp2	methyl CpG binding protein 2	0.012
aplnra	apelin receptor a	0.012
fam53b	family with sequence similarity 53, member B	0.012
lmo4a	LIM domain only 4a	0.012
ets2	v-ets erythroblastosis virus E26 oncogene homolog 2 (avian)	0.012
rhag	Rhesus blood group-associated glycoprotein	0.012
gsc	goosecoid	0.012
pitx1	paired-like homeodomain transcription factor 1	0.012
rx2	retinal homeobox gene 2	0.012
hoxc10a	homeo box C10a and homeobox protein Hox-C10a-like	0.012
kitb	kit receptor b	0.012	Zebrafish Mouse
zfpm2b	zinc finger protein, multitype 2b	0.012
hoxc11a	homeo box C11a	0.012
lhx3	LIM homeobox 3	0.012
nkx2.3	NK2 transcription factor related 3	0.011
cobl	cordon-bleu homolog (mouse)	0.011
mtmr8	myotubularin related protein 8	0.011
zgc:100919	zgc:100919	0.011
gata1a	GATA binding protein 1a	0.011
lhx1a	LIM homeobox 1a	0.011
lmo1	LIM domain only 1	0.011
alcama	activated leukocyte cell adhesion molecule a	0.011
wnt1	wingless-type MMTV integration site family, member 1	0.011
paics	phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoimidazole succinocarboxamide synthetase	0.011
inab	internexin neuronal intermediate filament protein, alpha b	0.011
fli1a	friend leukemia integration 1a	0.011
ext1c	exostoses (multiple) 1c	0.011
ttyh2l	tweety homolog 2, like	0.011
ndr2	nodal-related 2	0.011
ptgs1	prostaglandin-endoperoxide synthase 1	0.011
epha4b	eph receptor A4b	0.011
notch1b	notch homolog 1b	0.011
hoxb5a	homeo box B5a	0.010
vat1	vesicle amine transport protein 1 homolog (T californica)	0.010
dcaf7	ddb1 and cul4 associated factor 7	0.010
klhl31	kelch-like 31 (Drosophila)	0.010
coe2	coe2	0.010
robo4	roundabout homolog 4	0.010
ptprjb	protein tyrosine phosphatase, receptor type, J b	0.010
meis1	myeloid ecotropic viral integration 1	0.010
szl	sizzled	0.010
dla	deltaA	0.010
six4a	sine oculis homeobox homolog 4a	0.010
disp1	dispatched homolog 1 (Drosophila)	0.010
fcho2	FCH domain only 2	0.010
evlb	Enah/Vasp-like b	0.010
ctbp2l	C-terminal binding protein 2, like	0.010
wnt3	wingless-type MMTV integration site family, member 3	0.010
hoxa13b	homeo box A13b	0.010