IMP

Process View

Danio rerio

2 genes annotated in zebrafish

regulation of neural retina development

Any process that modulates the rate, frequency, or extent of neural retina development, the progression of the neural retina over time from its initial formation to the mature structure. The neural retina is the part of the retina that contains neurons and photoreceptor cells.

Loading network...

In addition to gene-name show these genes:

Known genes in the process in zebrafish Include functional analogs

Network Filters

Minimum relationship confidence:

Maximum number of genes:

Highlight known relationships in gold.

Graphical Options

Adjust edge length:

Adjust node size:

Fixed layout

Black background

Low confidence color:

Med confidence color:

High confidence color:

Hide the legend in the network

Save Options

Gene Predictions

Click on a gene's description to view its network relationships with genes known to be involved in "regulation of neural retina development"

Show only novel predictions Show only unknown genes Highlight genes with functional analogs involved in "regulation of neural retina development" (in gray)

Name	Description	Probability	Func Analog Organism
mitfa	microphthalmia-associated transcription factor a	0.982
cdh5	cadherin 5	0.947
efnb2a	ephrin B2a	0.848
pax2a	paired box gene 2a	0.841	Fly
sox10	SRY-box containing gene 10	0.841
kita	kit receptor a	0.792	Zebrafish
nkx2.2a	NK2 transcription factor related 2a	0.683
tie2	endothelium-specific receptor tyrosine kinase 2	0.494
pax6b	paired box gene 6b	0.477
vegfc	vascular endothelial growth factor c	0.441
tyr	tyrosinase	0.392
pax8	paired box gene 8	0.350	Fly
neurog1	neurogenin 1	0.350
runx1	runt-related transcription factor 1	0.333
trpm7	transient receptor potential cation channel, subfamily M, member 7	0.332
gata1a	GATA binding protein 1a	0.315
cmyb	transcription factor cmyb	0.313
gch2	GTP cyclohydrolase 2	0.277
ptch2	patched 2	0.275
pax2b	paired box gene 2b	0.257	Fly
ednrb1	endothelin receptor B	0.257
sox9b	SRY-box containing gene 9b	0.254
dbx1a	developing brain homeobox 1a	0.250
dlc	deltaC	0.223
fgf8a	fibroblast growth factor 8 a	0.200
flt4	fms-related tyrosine kinase 4	0.189	Zebrafish
atoh1a	atonal homolog 1a	0.172
aox3	aldehyde oxidase 3	0.159
tal1	T-cell acute lymphocytic leukemia 1	0.157
slc45a2	solute carrier family 45, member 2	0.150
prox1	prospero-related homeobox gene 1	0.148	Fly
plxnd1	plexin D1	0.144
spi1	spleen focus forming virus (SFFV) proviral integration oncogene spi1	0.144
notch3	notch homolog 3	0.141
pnp4a	purine nucleoside phosphorylase 4a	0.136
pmela	premelanosome protein a	0.134
gata2a	GATA-binding protein 2a	0.134
notch1a	notch homolog 1a	0.130
dll4	delta-like 4 (Drosophila)	0.128	Mouse
csf1ra	colony stimulating factor 1 receptor, a	0.123
etv2	ets variant gene 2	0.121
irx7	iroquois homeobox protein 7	0.120
jag2	jagged 2	0.119
si:ch73-60e21.1	si:ch73-60e21.1	0.111
dla	deltaA	0.110
im:7156396	im:7156396	0.108
dmd	dystrophin	0.100
foxn4	forkhead box N4	0.095
cyp1a	cytochrome P450, family 1, subfamily A	0.091
foxi1	forkhead box I1	0.089
lmx1b.1	LIM homeobox transcription factor 1, beta 1	0.088
ift88	intraflagellar transport 88 homolog	0.084
lrrc6	leucine rich repeat containing 6	0.084
nkx2.7	NK2 transcription factor related 7	0.082
unc5b	unc-5 homolog B (C. elegans)	0.081
atp1a1	ATPase, Na+/K+ transporting, alpha 1 polypeptide	0.075
otx1a	orthodenticle homolog 1a	0.071
nrp1a	neuropilin 1a	0.070
pax6a	paired box gene 6a	0.066
atoh7	atonal homolog 7	0.060
ins	preproinsulin	0.059
efhc1	EF-hand domain (C-terminal) containing 1	0.056
pax7a	paired box gene 7a	0.056
ncam1b	neural cell adhesion molecule 1b	0.055
gdf6a	growth differentiation factor 6a	0.055
hoxa3a	homeo box A3a	0.053
flt1	fms-related tyrosine kinase 1 (vascular endothelial growth factor/vascular permeability factor receptor)	0.053	Zebrafish
prdm1a	PR domain containing 1a, with ZNF domain	0.049
tie1	endothelium-specific receptor tyrosine kinase 1	0.048
sfrp5	secreted frizzled-related protein 5	0.048
bnc2	basonuclin 2	0.046
ush1c	Usher syndrome 1C (autosomal recessive, severe)	0.045
ptpro	protein tyrosine phosphatase, receptor type, O	0.045
dct	dopachrome tautomerase	0.044
dyx1c1	dyslexia susceptibility 1 candidate 1	0.044
nme5	non-metastatic cells 5, protein expressed in (nucleoside-diphosphate kinase)	0.044
cdh23	cadherin-like 23	0.042
rx3	retinal homeobox gene 3	0.042
tbx24	T-box 24	0.041
gfi1.1	growth factor independent 1.1	0.040
fabp11a	fatty acid binding protein 11a	0.040
lhx3	LIM homeobox 3	0.039
lrrc50	leucine rich repeat containing 50	0.039
foxj1b	forkhead box J1b	0.038
ltk	leukocyte tyrosine kinase	0.038
vsx2	visual system homeobox 2	0.037
cobl	cordon-bleu homolog (mouse)	0.037
foxd3	forkhead box D3	0.037
erg	v-ets erythroblastosis virus E26 oncogene like (avian)	0.036
evx1	even-skipped homeobox 1	0.035
tgfb3	transforming growth factor, beta 3	0.035
bmp4	bone morphogenetic protein 4	0.035
dusp5	dual specificity phosphatase 5	0.034
oprm1	opioid receptor, mu 1	0.034
alcama	activated leukocyte cell adhesion molecule a	0.034
wnt8b	wingless-type MMTV integration site family, member 8b	0.034
nkx2.1a	NK2 homeobox 1a	0.033
barhl2	BarH-like 2	0.033
si:ch211-235f6.2	si:ch211-235f6.2	0.032
fgfr1a	fibroblast growth factor receptor 1a	0.032
pax7b	paired box gene 7b	0.032
ptf1a	pancreas specific transcription factor, 1a	0.032	Mouse
ccbe1	collagen and calcium binding EGF domains 1	0.031
rfx2	regulatory factor X, 2 (influences HLA class II expression)	0.031
eng2b	engrailed 2b	0.031
nr2f2	nuclear receptor subfamily 2, group F, member 2	0.031
efna5a	ephrin A5a	0.031
fezf2	FEZ family zinc finger 2	0.031
hhex	hematopoietically expressed homeobox	0.030
si:ch211-212m21.5	si:ch211-212m21.5	0.030
zgc:162329	zgc:162329	0.030
dab2	disabled homolog 2 (Drosophila)	0.030
hoxd3a	homeo box D3a	0.029
esr2a	estrogen receptor 2a	0.029
sox7	SRY-box containing gene 7	0.028
col12a1	collagen, type XII, alpha 1	0.028
cxcr4a	chemokine (C-X-C motif) receptor 4a	0.028
agbl5	ATP/GTP binding protein-like 5	0.027
cyp26c1	cytochrome P450, family 26, subfamily C, polypeptide 1	0.027
ntn4	netrin 4	0.026
sc:d812	sc:d812	0.026
slc25a37	solute carrier family 25, member 37	0.026
zgc:162213	zgc:162213	0.026
otx2	orthodenticle homolog 2	0.026
gli1	GLI-Kruppel family member 1	0.026
wnt1	wingless-type MMTV integration site family, member 1	0.026
chd	chordin	0.026
atp6v0ca	ATPase, H+ transporting, lysosomal, V0 subunit c, a	0.025
hoxa2b	homeo box A2b	0.025
hoxb1b	homeo box B1b	0.024
cc2d2a	coiled-coil and C2 domain containing 2A	0.024
zgc:112329	zgc:112329	0.024
myo7aa	myosin VIIAa	0.024
zgc:101797	zgc:101797	0.024
mpp5a	membrane protein, palmitoylated 5a (MAGUK p55 subfamily member 5a)	0.023
boc	brother of CDO	0.023
kif17	kinesin family member 17	0.023
irx4b	iroquois homeobox protein 4b	0.023
mafba	v-maf musculoaponeurotic fibrosarcoma oncogene family, protein B (avian)	0.023
ift57	intraflagellar transport protein 57	0.023
barhl1.2	BarH-like 1.2	0.023
cep70	centrosomal protein 70	0.023
hey2	hairy/enhancer-of-split related with YRPW motif 2	0.023
LOC100333015	cytoplasmic dynein 2 heavy chain 1-like	0.023
neurod4	neurogenic differentiation 4	0.022
gbx2	gastrulation brain homeo box 2	0.022
odz4	odd Oz/ten-m homolog 4	0.022
pcsk5a	proprotein convertase subtilisin/kexin type 5a	0.022
wdr69	WD repeat domain 69	0.022
kdr	kinase insert domain receptor (a type III receptor tyrosine kinase)	0.022	Zebrafish
vegfaa	vascular endothelial growth factor Aa	0.022
tcf7l1a	transcription factor 7-like 1a (T-cell specific, HMG-box)	0.021
atp1b2b	ATPase, Na+/K+ transporting, beta 2b polypeptide	0.021
tcf7l2	transcription factor 7-like 2 (T-cell specific, HMG-box)	0.021
emilin1a	elastin microfibril interfacer 1a	0.021
wdr16	WD repeat domain 16	0.020
foxp2	forkhead box P2	0.020
olfm1b	olfactomedin 1b	0.020
mb	myoglobin	0.020
fgf3	fibroblast growth factor 3	0.020
mapk15	mitogen-activated protein kinase 15	0.020
flh	floating head	0.020
pitx3	paired-like homeodomain transcription factor 3	0.020
tbpl2	TATA box binding protein like 2	0.019
zgc:153288	zgc:153288	0.019
zgc:110784	zgc:110784	0.019
ikzf1	IKAROS family zinc finger 1 (Ikaros)	0.019
spata4	spermatogenesis associated 4	0.019
sall1a	sal-like 1a (Drosophila)	0.019
crb2a	crumbs homolog 2a	0.019
tbx16	T-box gene 16	0.018
zgc:101737	zgc:101737	0.018
foxa1	forkhead box A1	0.018
rag1	recombination activating gene 1	0.018
sox9a	SRY-box containing gene 9a	0.018
cdx4	caudal type homeo box transcription factor 4	0.018
alcamb	activated leukocyte cell adhesion molecule b	0.018
slc2a11b	solute carrier family 2 (facilitated glucose transporter), member 11b	0.018
fmnl2a	formin-like 2a	0.018
rasgrp3	RAS guanyl releasing protein 3 (calcium and DAG-regulated)	0.018
egr2b	early growth response 2b	0.018
mapk4	mitogen-activated protein kinase 4	0.018
pax3a	paired box gene 3a	0.017
lmx1b.2	LIM homeobox transcription factor 1, beta 2	0.017
ascl1a	achaete-scute complex-like 1a (Drosophila)	0.017
cp	ceruloplasmin	0.017
her5	hairy-related 5	0.017
fli1a	friend leukemia integration 1a	0.017
lin28a	lin-28 homolog A (C. elegans)	0.017
phox2a	paired-like homeobox 2a	0.017
ctbp2l	C-terminal binding protein 2, like	0.017
scn8aa	sodium channel, voltage-gated, type VIII, alpha a	0.017
nrp2b	neuropilin 2b	0.017
hbbe1.1	hemoglobin beta embryonic-1.1	0.016
atp2b1a	ATPase, Ca++ transporting, plasma membrane 1a	0.016
notch1b	notch homolog 1b	0.016
ccm2	cerebral cavernous malformation 2	0.016
nog2	noggin 2	0.016
zgc:63660	zgc:63660	0.016
foxa2	forkhead box A2	0.016
crestin	crestin	0.016
hmx4	H6 family homeobox 4	0.016
rorca	RAR-related orphan receptor C a	0.016
zgc:100919	zgc:100919	0.015
atp6v1al	ATPase, H+ transporting, lysosomal V1 subunit A, like	0.015
ccdc151	coiled-coil domain containing 151	0.015
her8a	hairy-related 8a	0.015
arhgef7b	Rho guanine nucleotide exchange factor (GEF) 7b	0.015
eng2a	engrailed 2a	0.015
ephb3a	eph receptor B3a	0.015
krit1	KRIT1, ankyrin repeat containing	0.015
spag6	sperm associated antigen 6	0.015
robo2	roundabout homolog 2	0.015
s100s	S100 calcium binding protein S	0.015
tbx2b	T-box 2b	0.015
otx5	orthodenticle homolog 5	0.014
emx3	empty spiracles homeobox 3	0.014
gfi1.2	growth factor independent 1.2	0.014
bmp2b	bone morphogenetic protein 2b	0.014
mc1r	melanocortin 1 receptor	0.014
zgc:110789	zgc:110789	0.014
mitfb	microphthalmia-associated transcription factor b	0.014
tagln3b	transgelin 3b	0.014
ephb4a	eph receptor B4a	0.014
pnp6	purine nucleoside phosphorylase 6	0.014
hnf1ba	HNF1 homeobox Ba	0.013
dlb	deltaB	0.013
jhdm1da	jumonji C domain containing histone demethylase 1 homolog Da (S. cerevisiae)	0.013
tfec	transcription factor EC	0.013
syngr1a	synaptogyrin 1a	0.013
klf4	Kruppel-like factor 4	0.013
hoxb1a	homeo box B1a	0.013
plagl2	pleiomorphic adenoma gene-like 2	0.013
tmem67	transmembrane protein 67	0.013
ntn1a	netrin 1a	0.013
sox4b	SRY-box containing gene 4b	0.013
tbx20	T-box 20	0.013
bdnf	brain-derived neurotrophic factor	0.012
epb41l5	erythrocyte membrane protein band 4.1 like 5	0.012
cald1	caldesmon 1	0.012
micall2a	mical-like 2a	0.012
prox1b	prospero-related homeobox gene 1b	0.012
slc22a7a	solute carrier family 22 (organic anion transporter), member 7a	0.012
zgc:100838	zgc:100838	0.012
dkk1b	dickkopf 1b	0.012
spaw	southpaw	0.012
mespb	mesoderm posterior b	0.012
hoxb4a	homeo box B4a	0.012
LOC100003104	pleckstrin homology domain-containing family A member 8-like	0.012
si:dkeyp-13f6.4	si:dkeyp-13f6.4	0.012
bbc3	BCL2 binding component 3	0.012
snai1b	snail homolog 1b (Drosophila)	0.012
tfap2e	transcription factor AP-2 epsilon	0.012
stab2	stabilin 2	0.011
ncs1a	neuronal calcium sensor 1a	0.011
lhx1a	LIM homeobox 1a	0.011
lrrc48	leucine rich repeat containing 48	0.011
gpr143	G protein-coupled receptor 143	0.011
hoxb3a	homeo box B3a	0.011
amph	amphiphysin	0.011
pou4f1	POU domain, class 4, transcription factor 1	0.011
gbx1	gastrulation brain homeobox 1	0.011
mpx	myeloid-specific peroxidase	0.011
slitrk4	slit and trk like 4 protein	0.011
atp1a1a.2	ATPase, Na+/K+ transporting, alpha 1a.2 polypeptide	0.011
hoxb8a	homeo box B8a	0.011
efna3b	ephrin A3b	0.011
pcdh8	protocadherin 8	0.011
zgc:112030	zgc:112030	0.010
nrarpa	notch-regulated ankyrin repeat protein a	0.010
dlx3b	distal-less homeobox gene 3b	0.010
ivns1abpa	influenza virus NS1A binding protein a	0.010
ptch1	patched 1	0.010
elovl4a	elongation of very long chain fatty acids (FEN1/Elo2, SUR4/Elo3, yeast)-like 4a	0.010
selp	selectin P	0.010
chrna6	cholinergic receptor, nicotinic, alpha 6	0.010
cdh2	cadherin 2, neuronal	0.010
hhip	hedgehog interacting protein	0.010