IMP

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Danio rerio

4 genes annotated in zebrafish

branching morphogenesis of a nerve

The process in which the anatomical structures of branches in a nerve are generated and organized. This term refers to an anatomical structure (nerve) not a cell (neuron).

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Known genes in the process in zebrafish Include functional analogs

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Gene Predictions

Click on a gene's description to view its network relationships with genes known to be involved in "branching morphogenesis of a nerve"

Show only novel predictions Show only unknown genes Highlight genes with functional analogs involved in "branching morphogenesis of a nerve" (in gray)

Name	Description	Probability	Func Analog Organism
esrrga	estrogen-related receptor gamma a	0.549
met	met proto-oncogene (hepatocyte growth factor receptor)	0.480
egr2b	early growth response 2b	0.339
meis2.2	myeloid ecotropic viral integration site 2.2	0.324
sema3aa	semaphorin 3aa	0.268
boc	brother of CDO	0.237
drd2l	dopamine receptor D2 like	0.227
efnb3b	ephrin B3b	0.204
flot1	flotillin 1	0.193
gfra1b	gdnf family receptor alpha 1b	0.182
cntn2	contactin 2	0.167
ache	acetylcholinesterase	0.163
sim1a	single-minded homolog 1a (Drosophila)	0.162
lrrtm1	leucine rich repeat transmembrane neuronal 1	0.150
smad1	MAD homolog 1 (Drosophila)	0.148
nlgn2a	neuroligin 2a	0.138
dtng	dystrobrevin, gamma and dystrobrevin, gamma-like	0.137
nrp1a	neuropilin 1a	0.136
skia	nuclear oncoprotein skia	0.135
col14a1	collagen, type XIV, alpha 1	0.127
sema6dl	sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D, like	0.123	Zebrafish
plxnb2a	plexin b2a	0.112	Zebrafish
grem2	gremlin 2, cysteine knot superfamily	0.109
irx2a	iroquois homeobox protein 2, a	0.106
spon1b	spondin 1b	0.103
ldb2a	LIM-domain binding factor 2a	0.102
dag1	dystroglycan 1	0.101
gfra1a	gdnf family receptor alpha 1a	0.094
slit3	slit (Drosophila) homolog 3	0.094
neo1	neogenin 1	0.093
jam2b	junctional adhesion molecule 2b	0.092
zbtb16a	zinc finger and BTB domain containing 16a	0.092
jhdm1da	jumonji C domain containing histone demethylase 1 homolog Da (S. cerevisiae)	0.090
pitx3	paired-like homeodomain transcription factor 3	0.089
si:dkeyp-63d11.7	si:dkeyp-63d11.7	0.084
cdh6	cadherin 6	0.082
srf	serum response factor	0.080
uts1	urotensin 1	0.080
nr4a2b	nuclear receptor subfamily 4, group A, member 2b	0.079
drd3	dopamine receptor D3	0.074
gria2a	glutamate receptor, ionotropic, AMPA 2a	0.069
mao	monoamine oxidase	0.068
gria3b	glutamate receptor, ionotrophic, AMPA 3b	0.068
lmo7a	LIM domain only 7a	0.067
sema3fb	semaphorin 3fb	0.067
dlx6a	distal-less homeobox gene 6a	0.066
si:ch211-209p5.2	si:ch211-209p5.2	0.064
nlgn4a	neuroligin 4a	0.063
mef2d	myocyte enhancer factor 2d	0.061
pds5b	PDS5, regulator of cohesion maintenance, homolog B (S. cerevisiae)	0.061
gria3a	glutamate receptor, ionotropic, AMPA 3a	0.060
efna5b	ephrin A5b	0.059
ptprf	protein tyrosine phosphatase, receptor type, F	0.059
rtn4b	reticulon 4b	0.059
drd2a	dopamine receptor D2a	0.058	Mouse
rarga	retinoic acid receptor gamma a	0.058
cdh10	cadherin 10, type 2 (T2-cadherin)	0.055
hhip	hedgehog interacting protein	0.054
plxnb2b	plexin b2b	0.053	Zebrafish
spon1a	spondin 1a	0.053
dlg1	discs, large (Drosophila) homolog 1	0.053
fgfr1b	fibroblast growth factor receptor 1b	0.051
insm1a	insulinoma-associated 1a	0.050
notch2	notch homolog 2	0.050
kal1b	Kallmann syndrome 1b sequence	0.049
jam2a	junctional adhesion molecule 2a	0.048
esrrb	estrogen-related receptor beta	0.048
slc16a10	solute carrier family 16, member 10 (aromatic amino acid transporter)	0.046
vldlr	very low density lipoprotein receptor	0.045
nfe2	nuclear factor, erythroid-derived 2	0.043
angpt1	angiopoietin 1	0.043
gria2b	glutamate receptor, ionotropic, AMPA 2b	0.042
col6a6	collagen, type VI, alpha 6	0.041
gria4a	glutamate receptor, ionotropic, AMPA 4a	0.041
drd2b	dopamine receptor D2b	0.040	Mouse
dpysl2b	dihydropyrimidinase-like 2b	0.039
fgfr2	fibroblast growth factor receptor 2	0.039	Mouse
scn1ba	sodium channel, voltage-gated, type I, beta a	0.039
csrnp1b	cysteine-serine-rich nuclear protein 1b	0.038
gria1a	glutamate receptor, ionotropic, AMPA 1a	0.038
ret1	receptor tyrosine kinase	0.038
si:ch211-173b8.2	si:ch211-173b8.2	0.037
rbms3	RNA binding motif, single stranded interacting protein	0.037
stmn4	stathmin-like 4	0.036
zgc:100829	zgc:100829	0.036
prdm16	PR domain containing 16	0.036
zgc:112180	zgc:112180	0.036
snai1a	snail homolog 1a (Drosophila)	0.035
nrp2b	neuropilin 2b	0.034
mecom	MDS1 and EVI1 complex locus	0.034
lass2	LAG1 homolog, ceramide synthase 2 (S. cerevisiae)	0.033
plce1	phospholipase C, epsilon 1	0.033
sema3ab	semaphorin 3ab	0.032
smc1al	structural maintenance of chromosomes 1A, like	0.032
dpf3	D4, zinc and double PHD fingers, family 3	0.031
ncam2	neural cell adhesion molecule 2	0.031
tnfsf10l2	tumor necrosis factor (ligand) superfamily, member 10 like 2	0.031
sb:eu2436	sb:eu2436	0.031
cyp1b1	cytochrome P450, family 1, subfamily B, polypeptide 1	0.031
tnc	tenascin C	0.030
si:dkeyp-59a8.4	si:dkeyp-59a8.4	0.029
efna2	ephrin A2	0.029
scrt1b	scratch homolog 1, zinc finger protein b (Drosophila)	0.029
fstl1b	follistatin-like 1b	0.029
dlx2a	distal-less homeobox gene 2a	0.029
arntl1b	aryl hydrocarbon receptor nuclear translocator-like 1b	0.028
pax3b	paired box gene 3b	0.028
msh2	mutS homolog 2 (E. coli)	0.027
im:7156396	im:7156396	0.027
tgfb3	transforming growth factor, beta 3	0.027
rpe65b	retinal pigment epithelium-specific protein 65b	0.027
p2rx3a	purinergic receptor P2X, ligand-gated ion channel, 3a	0.027
avpr1b	arginine vasopressin receptor 1B	0.026
gli2b	GLI-Kruppel family member GLI2b	0.026
mylk3	myosin light chain kinase 3	0.026
ncam1b	neural cell adhesion molecule 1b	0.026
nexn	nexilin (F actin binding protein)	0.026
zbtb4	zinc finger and BTB domain containing 4	0.026
mapta	microtubule-associated protein tau a	0.026
LOC556453	zinc finger homeobox protein 4-like	0.026
rtf1	Rtf1, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)	0.026
myo10l1	myosin X-like 1	0.026
alcama	activated leukocyte cell adhesion molecule a	0.025
cnr1	cannabinoid receptor 1	0.025
sema3d	semaphorin 3d	0.025	Zebrafish
lamb2	laminin, beta 2 (laminin S)	0.025
zgc:152873	zgc:152873	0.025
ywhag1	3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma polypeptide 1	0.025
aldh7a1	aldehyde dehydrogenase 7 family, member A1	0.025
odz4	odd Oz/ten-m homolog 4	0.024
wif1	wnt inhibitory factor 1	0.024
setd5	SET domain containing 5	0.024
hoxa3a	homeo box A3a	0.024
adra2b	adrenergic, alpha-2B-, receptor	0.024
slc17a6b	solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 6b	0.024
flrt1b	fibronectin leucine rich transmembrane 1b	0.024
robo1	roundabout homolog 1	0.024
kcnn1	potassium intermediate/small conductance calcium-activated channel, subfamily N, member 1	0.024
akt2	v-akt murine thymoma viral oncogene homolog 2	0.023
pdgfrl	platelet-derived growth factor receptor-like	0.023
egr1	early growth response 1	0.023
fgfr1a	fibroblast growth factor receptor 1a	0.023
ptrfb	polymerase I and transcript release factor b	0.023
itga7	integrin, alpha 7	0.022
mnx1	motor neuron and pancreas homeobox 1	0.022
mb	myoglobin	0.022
nhsl1a	NHS-like 1a	0.022
hgfa	hepatocyte growth factor a	0.022
zdhhc8b	zinc finger, DHHC-type containing 8b	0.022
rhoub	ras homolog gene family, member Ub	0.022
traf4a	tnf receptor-associated factor 4a	0.022
mef2bnb	mef2b neighbor	0.022
klf7	Kruppel-like factor 7 (ubiquitous)	0.021
oprd1b	opioid receptor, delta 1b	0.021
smoc1	SPARC related modular calcium binding 1	0.021
unc45b	unc-45 homolog B (C. elegans)	0.021
aldoaa	aldolase a, fructose-bisphosphate, a	0.021
ppp2r5d	protein phosphatase 2, regulatory subunit B', delta	0.021
nav3	neuron navigator 3	0.020
gria4b	glutamate receptor, ionotropic, AMPA 4b	0.020
col5a1	procollagen, type V, alpha 1	0.020
nlgn1	neuroligin 1	0.020
spry1	sprouty homolog 1 (Drosophila)	0.020
prickle1b	prickle homolog 1 (Drosophila) b	0.020
scn4aa	sodium channel, voltage-gated, type IV, alpha, a	0.020
p2rx2	purinergic receptor P2X, ligand-gated ion channel, 2	0.020
atl1	atlastin GTPase 1	0.020
entpd3	ectonucleoside triphosphate diphosphohydrolase 3	0.020
efnb2a	ephrin B2a	0.020
mef2a	myocyte enhancer factor 2a	0.020
irx3b	iroquois homeobox protein 3b	0.020
cd99l2	CD99 antigen-like 2	0.020
adra2c	adrenergic, alpha-2C-, receptor	0.020
lhx6	LIM homeobox 6	0.019
zeb2b	zinc finger E-box binding homeobox 2b	0.019
phox2a	paired-like homeobox 2a	0.019
nr4a3	nuclear receptor subfamily 4, group A, member 3	0.019
LOC569768	metabotropic glutamate receptor 8-like	0.019
ldb2b	LIM-domain binding factor 2b	0.019
and3	actinodin3	0.019
zgc:66385	zgc:66385	0.019
mpz	myelin protein zero	0.018
clu	clusterin (complement lysis inhibitor, SP-40,40, sulfated glycoprotein 2, testosterone-repressed prostate message 2, apolipoprotein J)	0.018
tnpo3	transportin 3	0.018
snip1	Smad nuclear interacting protein	0.018
vasp	vasodilator-stimulated phosphoprotein	0.018
nrg2a	neuregulin 2a	0.018
wwp2	WW domain containing E3 ubiquitin protein ligase 2	0.018
zgc:85838	zgc:85838	0.018
pdlim4	PDZ and LIM domain 4	0.018
drgx	dorsal root ganglia homeobox	0.018
fzd2	frizzled homolog 2	0.018
nlgn3a	neuroligin 3a	0.017
adm2	adrenomedullin 2	0.017
sox8	SRY-box containing gene 8	0.017
scrt1a	scratch homolog 1, zinc finger protein a (Drosophila)	0.017
zgc:136878	zgc:136878	0.017
vdra	vitamin D receptor a	0.017
gsx1	GS homeobox 1	0.017
pdpk1a	3-phosphoinositide dependent protein kinase-1a	0.017
wu:fc31e07	wu:fc31e07	0.017
zgc:112084	zgc:112084	0.017
nrxn2a	neurexin 2a	0.017
nlgn2b	neuroligin 2b	0.016
pax3a	paired box gene 3a	0.016
col5a2l	collagen, type V, alpha 2-like	0.016
eya4	eyes absent homolog 4 (Drosophila)	0.016
ptk2.1	protein tyrosine kinase 2a	0.016
kal1a	Kallmann syndrome 1a sequence	0.016
pafah1b1a	platelet-activating factor acetylhydrolase, isoform Ib, alpha subunit a	0.016
gli3	GLI-Kruppel family member GLI3	0.016
kbp	kif1-binding protein	0.016
naa15b	N(alpha)-acetyltransferase 15, NatA auxiliary subunit b	0.016
sucla2	succinate-CoA ligase, ADP-forming, beta subunit	0.016
csnk1g2a	casein kinase 1, gamma 2a	0.016
ppp3r1a	protein phosphatase 3 (formerly 2B), regulatory s1ubunit B, alpha isoform, a	0.016
zgc:111944	zgc:111944	0.016
LOC555504	novel protocadherin protein	0.016
pnx	posterior neuron-specific homeobox	0.016
hcrtr2	hypocretin (orexin) receptor 2	0.016
p2rx5	purinergic receptor P2X, ligand-gated ion channel, 5	0.015
hoxb1a	homeo box B1a	0.015
nxn	nucleoredoxin	0.015
abcb3l1	ATP-binding cassette, sub-family B (MDR/TAP), member 3 like 1	0.015
cadm1a	cell adhesion molecule 1a	0.015
lratb	lecithin retinol acyltransferase b (phosphatidylcholine--retinol O-acyltransferase b)	0.015
gap43	growth associated protein 43	0.015
tcf4	transcription factor 4	0.015
hoxb2a	homeo box B2a	0.015
sema3ga	semaphorin 3ga	0.015
ccbe1	collagen and calcium binding EGF domains 1	0.015
dock8	dedicator of cytokinesis 8	0.015
uts2a	urotensin 2, alpha	0.015
nfasca	neurofascin homolog (chicken) a	0.015
sb:eu2485	sb:eu2485	0.015
scn1a	sodium channel, voltage-gated, type I, alpha	0.015
stmn2b	stathmin-like 2b	0.015
foxp2	forkhead box P2	0.015
atp5a1	ATP synthase, H+ transporting, mitochondrial F1 complex, alpha subunit 1, cardiac muscle	0.015
pdzrn3	PDZ domain containing RING finger 3 and PDZ domain containing ring finger 3	0.015
wu:fi18a01	wu:fi18a01	0.014
chrnd	cholinergic receptor, nicotinic, delta polypeptide	0.014
xpo4	exportin 4	0.014
ktn1	kinectin 1	0.014
mical3	flavoprotein oxidoreductase MICAL3	0.014
tsc1a	tuberous sclerosis 1a	0.014
tnfaip8	tumor necrosis factor, alpha-induced protein 8	0.014
sc:d411	sc:d411	0.014
sp8a	sp8 transcription factor a	0.014
rabgef1l	RAB guanine nucleotide exchange factor (GEF) 1, like	0.014
zgc:101606	zgc:101606	0.014
penkb	proenkephalin b	0.014
il11ra	interleukin 11 receptor, alpha	0.014
zgc:92218	zgc:92218	0.014
phox2b	paired-like homeobox 2b	0.014
si:dkey-15j16.4	si:dkey-15j16.4	0.014
tbc1d19	TBC1 domain family, member 19	0.014
cacnb3a	calcium channel, voltage-dependent, beta 3a	0.014
dlx5a	distal-less homeobox gene 5a	0.013
pabpc1b	poly A binding protein, cytoplasmic 1 b	0.013
im:7137555	im:7137555	0.013
sema3e	sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3E	0.013
emp2	epithelial membrane protein 2	0.013
hsd3b7	hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase	0.013
zgc:100799	zgc:100799	0.013
mars	methionine-tRNA synthetase	0.013
chst11	carbohydrate (chondroitin 4) sulfotransferase 11	0.013
abcb7	ATP-binding cassette, sub-family B (MDR/TAP), member 7	0.013
ogdh	oxoglutarate (alpha-ketoglutarate) dehydrogenase (lipoamide)	0.013
plekhh1	pleckstrin homology domain containing, family H (with MyTH4 domain) member 1	0.013
si:ch211-12e1.4	si:ch211-12e1.4	0.013
six1b	sine oculis homeobox homolog 1b	0.013
ppp3ccb	protein phosphatase 3, catalytic subunit, gamma isozyme, b	0.013
smg7	Smg-7 homolog, nonsense mediated mRNA decay factor (C. elegans)	0.013
zgc:110800	zgc:110800	0.013
bckdhb	branched chain ketoacid dehydrogenase E1, beta polypeptide	0.013
igfbp2a	insulin-like growth factor binding protein 2a	0.013
cadps2	Ca2+-dependent activator protein for secretion 2	0.013
rbfox1l	RNA binding protein, fox-1 homolog (C. elegans) 1-like	0.013
hspa9	heat shock protein 9	0.013
fryl	furry homolog-like (Drosophila)	0.013
lrrfip2	leucine rich repeat (in FLII) interacting protein 2	0.013
hoxa2b	homeo box A2b	0.013
gfra2	glial cell line derived neurotrophic factor family receptor alpha 2	0.013
slc30a9	solute carrier family 30 (zinc transporter), member 9	0.013
fgf5	fibroblast growth factor 5	0.013
col10a1	collagen, type X, alpha 1	0.013
lamb2l	laminin, beta 2-like	0.013
rasa1a	RAS p21 protein activator 1a	0.013
phrf1	PHD and ring finger domains 1	0.013
meis1	myeloid ecotropic viral integration 1	0.013
si:dkeyp-7c9.1	si:dkeyp-7c9.1	0.013
ppp1r12a	protein phosphatase 1, regulatory (inhibitor) subunit 12A	0.013
zgc:158138	zgc:158138	0.012
dus1l	dihydrouridine synthase 1-like (S. cerevisiae)	0.012
coro1ca	coronin, actin binding protein, 1Ca	0.012
mmp15b	matrix metallopeptidase 15b	0.012
LOC565839	tumor necrosis factor alpha-induced protein 2-like	0.012
fam20b	family with sequence similarity 20, member B (H. sapiens)	0.012
pald	paladin	0.012
ddc	dopa decarboxylase	0.012
acaa2	acetyl-CoA acyltransferase 2	0.012
polr3e	polymerase (RNA) III (DNA directed) polypeptide E	0.012
ell2	elongation factor, RNA polymerase II, 2	0.012
sema5a	sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A	0.012
tm9sf4	transmembrane 9 superfamily protein member 4	0.012
isl2b	islet2b	0.012
hadha	hydroxyacyl-Coenzyme A dehydrogenase/3-ketoacyl-Coenzyme A thiolase/enoyl-Coenzyme A hydratase, alpha subunit	0.012
p2rx3b	purinergic receptor P2X, ligand-gated ion channel, 3b	0.012
elna	elastin a	0.012
pcdh10a	protocadherin 10a	0.012
evx2	even-skipped homeobox 2	0.012
sema3gb	semaphorin 3gb	0.012
si:ch211-207m11.1	si:ch211-207m11.1	0.012
si:ch211-57k11.10	si:ch211-57k11.10	0.012
tsc22d2	TSC22 domain family 2 and TSC22 domain family, member 2	0.012
sb:cb215	sb:cb215	0.012
tlk1a	tousled-like kinase 1a	0.012
grm5a	glutamate receptor, metabotropic 5a	0.012
srpr	signal recognition particle receptor (docking protein)	0.012
si:dkey-24g18.2	si:dkey-24g18.2	0.012
nr5a2	nuclear receptor subfamily 5, group A, member 2	0.012
nadl1.1	neural adhesion molecule L1.1	0.012
recql5	RecQ protein-like 5	0.012
myom1a	myomesin 1a (skelemin)	0.012
otud7b	OTU domain containing 7B	0.012
flot1b	flotillin 1b	0.012
greb1l	growth regulation by estrogen in breast cancer-like	0.011
si:ch211-233a1.8	si:ch211-233a1.8	0.011
csrp3	cysteine and glycine-rich protein 3 (cardiac LIM protein)	0.011
wls	wntless homolog (Drosophila)	0.011
ppp6r2	protein phosphatase 6, regulatory subunit 2	0.011
got2b	glutamic-oxaloacetic transaminase 2b, mitochondrial (aspartate aminotransferase 2)	0.011
pla1a	phospholipase A1 member A	0.011
myf5	myogenic factor 5	0.011
atp1b2a	ATPase, Na+/K+ transporting, beta 2a polypeptide	0.011
cul4b	cullin 4B	0.011
lrp6	low-density lipoprotein receptor-related protein 6	0.011
fgfrl1a	fibroblast growth factor receptor-like 1a	0.011
zgc:73225	zgc:73225	0.011
pvrl1b	poliovirus receptor-related 1b	0.011
faf1	Fas associated factor 1	0.011
pik3r4	phosphoinositide-3-kinase, regulatory subunit 4	0.011
tbx4	T-box 4	0.011
si:dkey-76k16.7	si:dkey-76k16.7	0.011
irgq1	immunity-related GTPase family, q1	0.011
pomgnt1	protein O-linked mannose beta1,2-N-acetylglucosaminyltransferase	0.011
pcdh7	protocadherin 7	0.011
atoh8	atonal homolog 8	0.011
med15	mediator complex subunit 15	0.011
etv1	ets variant gene 1	0.011
egfl6	EGF-like-domain, multiple 6	0.011
efemp2	EGF-containing fibulin-like extracellular matrix protein 2	0.011
prmt7	protein arginine N-methyltransferase 7	0.011
nap1l4a	nucleosome assembly protein 1-like 4a	0.011
zgc:198195	zgc:198195	0.011
spna2	spectrin alpha 2	0.011
ebf3	early B-cell factor 3	0.011
tfap2e	transcription factor AP-2 epsilon	0.011
zgc:193699	zgc:193699	0.011
tecrb	trans-2,3-enoyl-CoA reductase b	0.011
dopey1	dopey family member 1	0.011
col4a6	collagen, type IV, alpha 6	0.010
id2a	inhibitor of DNA binding 2, dominant negative helix-loop-helix protein, a	0.010
egln1	egl nine homolog 1 (C. elegans)	0.010
myl2	myosin, light polypeptide 2, regulatory, cardiac, slow	0.010
arl8	ADP-ribosylation factor-like 8	0.010
neurog3	neurogenin 3	0.010
gria1b	glutamate receptor, ionotropic, AMPA 1b	0.010
ca10a	carbonic anhydrase Xa	0.010
syncripl	synaptotagmin binding, cytoplasmic RNA interacting protein, like	0.010
zgc:56304	zgc:56304	0.010
colec11	collectin sub-family member 11	0.010
nomo	nodal modulator	0.010
unc5db	unc-5 homolog Db (C. elegans)	0.010
stac3	SH3 and cysteine rich domain 3	0.010
wu:fb01h12	wu:fb01h12	0.010
ntn1b	netrin 1b	0.010
barx1	BarH-like homeobox 1	0.010
papolg	poly(A) polymerase gamma	0.010
cul1b	cullin 1b	0.010
zgc:112077	zgc:112077	0.010
slc6a9	solute carrier family 6 (neurotransmitter transporter, glycine), member 9	0.010
hsp47	heat shock protein 47	0.010
jam3b	junctional adhesion molecule 3b	0.010
poldip2	polymerase (DNA-directed), delta interacting protein 2	0.010
sirt5	sirtuin (silent mating type information regulation 2 homolog) 5 (S. cerevisiae)	0.010