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Danio rerio

2 genes annotated in zebrafish

endodermal digestive tract morphogenesis

The process in which the anatomical structures of the endodermal digestive tract are generated and organized. The endodermal digestive tract includes those portions of the digestive tract that are derived from endoderm.

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Known genes in the process in zebrafish Include functional analogs

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Gene Predictions

Click on a gene's description to view its network relationships with genes known to be involved in "endodermal digestive tract morphogenesis"

Show only novel predictions Show only unknown genes Highlight genes with functional analogs involved in "endodermal digestive tract morphogenesis" (in gray)

Name	Description	Probability	Func Analog Organism
ndr2	nodal-related 2	0.797
lamb1a	laminin, beta 1a	0.779
fgf8a	fibroblast growth factor 8 a	0.772
aldh1a2	aldehyde dehydrogenase 1 family, member A2	0.649
shha	sonic hedgehog a	0.608
tp53	tumor protein p53	0.504
cdh2	cadherin 2, neuronal	0.458
mib	mind bomb	0.437
sox2	SRY-box containing gene 2	0.434
sox32	SRY-box containing gene 32	0.405	Mouse
sox11a	SRY-box containing gene 11a	0.402
fn1	fibronectin 1	0.369
hnf1ba	HNF1 homeobox Ba	0.356
tbx1	T-box 1	0.349
ptch2	patched 2	0.340
gli1	GLI-Kruppel family member 1	0.321
chd	chordin	0.317
dharma	dharma	0.282
mpp5a	membrane protein, palmitoylated 5a (MAGUK p55 subfamily member 5a)	0.274
gli2a	GLI-Kruppel family member GLI2a	0.257
oep	one-eyed pinhead	0.253
ptch1	patched 1	0.226
hhip	hedgehog interacting protein	0.216
gdf6a	growth differentiation factor 6a	0.201
lft1	lefty1	0.187
cxcr4a	chemokine (C-X-C motif) receptor 4a	0.182
gata5	GATA-binding protein 5	0.158
dld	deltaD	0.154
wls	wntless homolog (Drosophila)	0.151
dag1	dystroglycan 1	0.146
fbn2b	fibrillin 2b	0.138
nr2f1a	nuclear receptor subfamily 2, group F, member 1a	0.135
pax6a	paired box gene 6a	0.127
wnt11	wingless-type MMTV integration site family, member 11	0.127
cdx4	caudal type homeo box transcription factor 4	0.119
bon	bonnie and clyde	0.118
cxcl12a	chemokine (C-X-C motif) ligand 12a (stromal cell-derived factor 1)	0.108
atp1a1	ATPase, Na+/K+ transporting, alpha 1 polypeptide	0.104
wnt5b	wingless-type MMTV integration site family, member 5b	0.102
smo	smoothened homolog (Drosophila)	0.101
col11a2	collagen type XI alpha-2	0.098
sox17	SRY-box containing gene 17	0.098	Mouse
prkci	protein kinase C, iota	0.098
pou5f1	POU domain, class 5, transcription factor 1	0.098
gsc	goosecoid	0.098
fgf3	fibroblast growth factor 3	0.097
cdc25	cell division cycle 25 homolog	0.095
cyp26c1	cytochrome P450, family 26, subfamily C, polypeptide 1	0.094
flh	floating head	0.087
hspa5	heat shock protein 5	0.087
bmp7a	bone morphogenetic protein 7a	0.086
foxa3	forkhead box A3	0.084
nog1	noggin 1	0.083
smarca4	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4	0.081
pax2a	paired box gene 2a	0.077
ext2	exostoses (multiple) 2	0.075
meis1	myeloid ecotropic viral integration 1	0.071
vangl2	vang-like 2 (van gogh, Drosophila)	0.069
wif1	wnt inhibitory factor 1	0.067
mmp2	matrix metalloproteinase 2	0.064
tll1	tolloid-like 1	0.062
med12	mediator of RNA polymerase II transcription, subunit 12 homolog	0.061
wnt8b	wingless-type MMTV integration site family, member 8b	0.057
nkx2.2a	NK2 transcription factor related 2a	0.057
sox4a	SRY-box containing gene 4a	0.056
spns2	spinster homolog 2 (Drosophila)	0.056
met	met proto-oncogene (hepatocyte growth factor receptor)	0.052
dnajb11	DnaJ (Hsp40) homolog, subfamily B, member 11	0.052
snai1b	snail homolog 1b (Drosophila)	0.050
sema3aa	semaphorin 3aa	0.049
arhgef7b	Rho guanine nucleotide exchange factor (GEF) 7b	0.049
tbx16	T-box gene 16	0.049
dlc	deltaC	0.045
pax3a	paired box gene 3a	0.043
dkk1b	dickkopf 1b	0.043
admp	anti-dorsalizing morphogenic protein	0.043
bmpr1aa	bone morphogenetic protein receptor, type 1aa	0.043
dbx1a	developing brain homeobox 1a	0.043
col8a1a	collagen, type VIII, alpha 1a	0.042
sox4b	SRY-box containing gene 4b	0.042
ndr1	nodal-related 1	0.042
sec61al1	Sec61 alpha like 1	0.041
rarab	retinoic acid receptor, alpha b	0.041
cxcr4b	chemokine (C-X-C motif), receptor 4b	0.041
pitx3	paired-like homeodomain transcription factor 3	0.040
axin1	axin 1	0.040
lfng	lunatic fringe homolog	0.040
manf	mesencephalic astrocyte-derived neurotrophic factor	0.039
gpc4	glypican 4	0.039
disp1	dispatched homolog 1 (Drosophila)	0.038
fgfr2	fibroblast growth factor receptor 2	0.038	Mouse
vent	ventral expressed homeobox	0.037
wnt4a	wingless-type MMTV integration site family, member 4a	0.037
pdip5	protein disulfide isomerase-related protein (provisional)	0.037
hgfa	hepatocyte growth factor a	0.036
neurod	neurogenic differentiation	0.036
lama1	laminin, alpha 1	0.036
pth2	parathyroid hormone 2	0.035
zgc:63523	zgc:63523	0.035
sox9b	SRY-box containing gene 9b	0.035
dla	deltaA	0.035
cyp26b1	cytochrome P450, family 26, subfamily b, polypeptide 1	0.034
pbx4	pre-B-cell leukemia transcription factor 4	0.034
zgc:153260	zgc:153260	0.034
pmp22a	peripheral myelin protein 22a	0.033
dzip1	DAZ interacting protein 1	0.032
rbpms2	RNA binding protein with multiple splicing 2	0.032
mdkb	midkine-related growth factor b	0.032
shhb	sonic hedgehog b	0.031
osr1	odd-skipped related 1 (Drosophila)	0.030
calr	calreticulin and calreticulin	0.030
boc	brother of CDO	0.030
anxa5b	annexin A5b	0.030
fzd5	frizzled homolog 5	0.029
lrrtm1	leucine rich repeat transmembrane neuronal 1	0.029
calrl	calreticulin like	0.029
ntla	no tail a	0.028
mxtx2	mix-type homeobox gene 2	0.027
lmo4a	LIM domain only 4a	0.027
fli1a	friend leukemia integration 1a	0.025
smad5	MAD homolog 5 (Drosophila)	0.025
cdx1a	caudal type homeo box transcription factor 1 a	0.025
s1pr2	sphingosine-1-phosphate receptor 2	0.025
klf4a	Kruppel-like transcription factor 4a	0.025
tbx2b	T-box 2b	0.025
her6	hairy-related 6	0.025
fzd8a	frizzled homolog 8a	0.024
sox3	SRY-box containing gene 3	0.024
sfrp5	secreted frizzled-related protein 5	0.023
mab21l2	mab-21-like 2	0.023
epha4a	eph receptor A4a	0.023
jag1b	jagged 1b	0.023
wnt1	wingless-type MMTV integration site family, member 1	0.023
cx43	connexin 43	0.022
cnr1	cannabinoid receptor 1	0.022
rspo3	R-spondin 3 homolog (Xenopus laevis)	0.021
id2a	inhibitor of DNA binding 2, dominant negative helix-loop-helix protein, a	0.021	Mouse
hand2	heart and neural crest derivatives expressed transcript 2	0.021
ntn1b	netrin 1b	0.021
smad1	MAD homolog 1 (Drosophila)	0.021
col27a1a	collagen, type XXVII, alpha 1a	0.020
rasl11b	RAS-like, family 11, member B	0.020
eve1	even-skipped-like1	0.020
lft2	lefty2	0.020
efnb2a	ephrin B2a	0.020
gbx2	gastrulation brain homeo box 2	0.020
gli2b	GLI-Kruppel family member GLI2b	0.019
krt4	keratin 4	0.019
tnw	tenascin W	0.019
prox1	prospero-related homeobox gene 1	0.019
matn4	matrilin 4	0.019
foxh1	forkhead box H1	0.019
mc5rb	melanocortin 5b receptor	0.019
col1a2	collagen, type I, alpha 2	0.019
mpped2	metallophosphoesterase domain containing 2	0.018
gata6	GATA-binding protein 6	0.018
supt6h	suppressor of Ty 6 homolog	0.018
flncb	filamin C, gamma b (actin binding protein 280)	0.018
pdia3	protein disulfide isomerase family A, member 3	0.018
sim1a	single-minded homolog 1a (Drosophila)	0.018
podxl	podocalyxin-like	0.018
hyou1	hypoxia up-regulated 1	0.018
atp6v0ca	ATPase, H+ transporting, lysosomal, V0 subunit c, a	0.018
pdia4	protein disulfide isomerase associated 4	0.018
drd2a	dopamine receptor D2a	0.017
dnajc3	DnaJ (Hsp40) homolog, subfamily C, member 3	0.017
dcn	decorin	0.017
sulf2l	sulfatase 2, like	0.017
alcamb	activated leukocyte cell adhesion molecule b	0.017
bmp2b	bone morphogenetic protein 2b	0.017
ihha	Indian hedgehog homolog a	0.017
disc1	disrupted in schizophrenia 1	0.016
foxb1.2	forkhead box B1.2	0.016
wnt3a	wingless-type MMTV integration site family, member 3A	0.016
apc	adenomatosis polyposis coli	0.016
sox10	SRY-box containing gene 10	0.016
gata4	GATA-binding protein 4	0.016
og9x	OG9 homeobox gene	0.016
acvr1l	activin A receptor, type I like	0.015
olig2	oligodendrocyte lineage transcription factor 2	0.015
col5a1	procollagen, type V, alpha 1	0.015
arnt2	aryl hydrocarbon receptor nuclear translocator 2	0.015
ntn2	netrin 2	0.015
bcl2l10	BCL2-like 10 (apoptosis facilitator)	0.015
lama5	laminin, alpha 5	0.015
nkx6.1	NK6 transcription factor related, locus 1 (Drosophila)	0.015
dhrs3a	dehydrogenase/reductase (SDR family) member 3a	0.015
hnf4a	hepatocyte nuclear factor 4, alpha	0.014
tfap2a	transcription factor AP-2 alpha	0.014
lef1	lymphocyte enhancer binding factor 1	0.014
foxd3	forkhead box D3	0.014
irx1b	iroquois homeobox protein 1, b	0.014
mmp14a	matrix metalloproteinase 14a (membrane-inserted)	0.014
sfrp1a	secreted frizzled-related protein 1a	0.014	Zebrafish
ywhah	tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, eta polypeptide	0.014
tnnt2a	troponin T2a, cardiac	0.014
tfap2c	transcription factor AP-2 gamma (activating enhancer binding protein 2 gamma)	0.014
ascl1a	achaete-scute complex-like 1a (Drosophila)	0.014
top2a	topoisomerase (DNA) II alpha	0.014
myf6	myogenic factor 6	0.014
her5	hairy-related 5	0.013
nr2f2	nuclear receptor subfamily 2, group F, member 2	0.013
nr5a2	nuclear receptor subfamily 5, group A, member 2	0.013
mef2ca	myocyte enhancer factor 2ca	0.013
LOC100000500	sclerostin-like	0.013
pnx	posterior neuron-specific homeobox	0.013
pcdh18b	protocadherin 18b	0.013
glulb	glutamate-ammonia ligase (glutamine synthase) b	0.013
hdac1	histone deacetylase 1	0.012
szl	sizzled	0.012
ctsf	cathepsin F	0.012
gfra1b	gdnf family receptor alpha 1b	0.012
zff9	zinc finger protein 9	0.012
asb8	ankyrin repeat and SOCS box-containing 8	0.012
tbx24	T-box 24	0.012
cbfb	core-binding factor, beta subunit	0.012
myca	myelocytomatosis oncogene a	0.012
pcdh18a	protocadherin 18a	0.012
or111-5	odorant receptor, family D, subfamily 111, member 5	0.012
atp6v1e1b	ATPase, H+ transporting, lysosomal, V1 subunit E isoform 1b	0.012
rerea	arginine-glutamic acid dipeptide (RE) repeats a	0.012
mecom	MDS1 and EVI1 complex locus	0.012
meis2.2	myeloid ecotropic viral integration site 2.2	0.012
hlx1	H2.0-like homeo box 1 (Drosophila)	0.011
LOC100000687	signal peptide, CUB and EGF-like domain-containing protein 3-like	0.011
elavl3	ELAV (embryonic lethal, abnormal vision, Drosophila)-like 3 (Hu antigen C)	0.011
lin7c	lin-7 homolog C (C. elegans)	0.011
cnn2	calponin 2	0.011
pdzrn3	PDZ domain containing RING finger 3 and PDZ domain containing ring finger 3	0.011
tal1	T-cell acute lymphocytic leukemia 1	0.011
lhx1a	LIM homeobox 1a	0.011
rx3	retinal homeobox gene 3	0.011
paqr7b	progestin and adipoQ receptor family member VII, b	0.011
zic2a	zic family member 2 (odd-paired homolog, Drosophila), a	0.011
pax6b	paired box gene 6b	0.011
rest	RE1-silencing transcription factor	0.011
gbx1	gastrulation brain homeobox 1	0.011
dact2	dapper homolog 2, antagonist of beta-catenin (xenopus)	0.011
rxrbb	retinoid x receptor, beta b	0.011
col12a1	collagen, type XII, alpha 1	0.011
mc3r	melanocortin 3 receptor	0.011
mapk12	mitogen-activated protein kinase 12	0.011
ahctf1	AT hook containing transcription factor 1	0.011
fgfr4	fibroblast growth factor receptor 4	0.011
csrnp1b	cysteine-serine-rich nuclear protein 1b	0.011
mnx1	motor neuron and pancreas homeobox 1	0.011
pdlim4	PDZ and LIM domain 4	0.011
calm2a	calmodulin 2a (phosphorylase kinase, delta)	0.011
hsp90a.1	heat shock protein 90-alpha 1	0.011
sox11b	SRY-box containing gene 11b	0.010
sox9a	SRY-box containing gene 9a	0.010
atp6v1ba	ATPase, H+ transporting, lysosomal, V1 subunit B, member a	0.010
cd82a	CD82 antigen, a	0.010
isl1	islet1	0.010
meis3	myeloid ecotropic viral integration site 3	0.010
vldlr	very low density lipoprotein receptor	0.010
rogdi	rogdi homolog (Drosophila)	0.010
dlx4b	distal-less homeobox gene 4b	0.010
mmrn2a	multimerin 2a	0.010
lnx2b	ligand of numb-protein X 2b	0.010
casp3a	caspase 3, apoptosis-related cysteine protease a	0.010