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Homo sapiens

50 genes annotated in human

nucleosome assembly

The aggregation, arrangement and bonding together of a nucleosome, the beadlike structural units of eukaryotic chromatin composed of histones and DNA.

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Known genes in the process in human Include functional analogs

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Gene Predictions

Click on a gene's description to view its network relationships with genes known to be involved in "nucleosome assembly"

Show only novel predictions Show only unknown genes Highlight genes with functional analogs involved in "nucleosome assembly" (in gray)

Name	Description	Probability	Func Analog Organism
HIST1H2BD	histone cluster 1, H2bd	1.000
HIST1H3D	histone cluster 1, H3d	1.000
HIST1H2BF	histone cluster 1, H2bf	1.000
HIST1H1C	histone cluster 1, H1c	1.000
HIST1H2BG	histone cluster 1, H2bg	1.000
HIST1H2BE	histone cluster 1, H2be	1.000
HIST1H2AC	histone cluster 1, H2ac	1.000	Human
HIST1H2AE	histone cluster 1, H2ae	1.000	Human
CBX5	chromobox homolog 5	1.000
HIST1H2BI	histone cluster 1, H2bi	1.000
HIST1H2BH	histone cluster 1, H2bh	1.000
HIST2H2BE	histone cluster 2, H2be	1.000
HIST1H2BK	histone cluster 1, H2bk	1.000
HIST1H2BC	histone cluster 1, H2bc	1.000
HIST1H2AJ	histone cluster 1, H2aj	1.000	Human
HIST2H2AA4	histone cluster 2, H2aa4	1.000	Human
ASF1B	ASF1 anti-silencing function 1 homolog B (S. cerevisiae)	1.000
HIST1H2AM	histone cluster 1, H2am	1.000
HIST1H3B	histone cluster 1, H3b	0.999
HIST1H3A	histone cluster 1, H3a	0.998
HIST1H4A	histone cluster 1, H4a	0.996
HIST1H2AI	histone cluster 1, H2ai	0.996	Human
RBBP4	retinoblastoma binding protein 4	0.996
CDAN1	congenital dyserythropoietic anemia, type I	0.994
SET	SET nuclear oncogene	0.994
HIST1H4D	histone cluster 1, H4d	0.991
HIST1H3H	histone cluster 1, H3h	0.990
CBX1	chromobox homolog 1	0.989
HIST1H2BM	histone cluster 1, H2bm	0.987
HIST1H4B	histone cluster 1, H4b	0.986
HIST1H4F	histone cluster 1, H4f	0.986
HIST1H2AG	histone cluster 1, H2ag	0.985	Human
HIST1H3G	histone cluster 1, H3g	0.982
CHAF1A	chromatin assembly factor 1, subunit A (p150)	0.977
HIST1H2AL	histone cluster 1, H2al	0.976	Human
HIST1H4H	histone cluster 1, H4h	0.974
DAXX	death-domain associated protein	0.971
HIST1H2BB	histone cluster 1, H2bb	0.969
HIST1H4E	histone cluster 1, H4e	0.965
HIST1H2AB	histone cluster 1, H2ab	0.963	Human
H3F3A	H3 histone, family 3A	0.962
HIST1H2BJ	histone cluster 1, H2bj	0.961
POU5F1	POU class 5 homeobox 1	0.960
CBX3	chromobox homolog 3	0.956
SUMO2	SMT3 suppressor of mif two 3 homolog 2 (S. cerevisiae)	0.952
PTMA	prothymosin, alpha	0.907
HIST1H2BO	histone cluster 1, H2bo	0.883
POU3F2	POU class 3 homeobox 2	0.876
HDAC2	histone deacetylase 2	0.863
SMARCA5	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5	0.860
NBN	nibrin	0.855
HIST2H2AC	histone cluster 2, H2ac	0.830	Human
UHRF1	ubiquitin-like with PHD and ring finger domains 1	0.829
PAX3	paired box 3	0.827
HIST1H1E	histone cluster 1, H1e	0.819
XRCC5	X-ray repair complementing defective repair in Chinese hamster cells 5 (double-strand-break rejoining)	0.804
HIST2H4A	histone cluster 2, H4a	0.786
ANP32A	acidic (leucine-rich) nuclear phosphoprotein 32 family, member A	0.775	Human
HIST1H4J	histone cluster 1, H4j	0.744
SSRP1	structure specific recognition protein 1	0.731
ATRX	alpha thalassemia/mental retardation syndrome X-linked	0.727
HIST1H1D	histone cluster 1, H1d	0.722
CHAF1B	chromatin assembly factor 1, subunit B (p60)	0.715
HIST4H4	histone cluster 4, H4	0.700
CENPA	centromere protein A	0.693
DHX30	DEAH (Asp-Glu-Ala-His) box polypeptide 30	0.658
HIST1H3C	histone cluster 1, H3c	0.612
HIST1H2BN	histone cluster 1, H2bn	0.603
BAZ1B	bromodomain adjacent to zinc finger domain, 1B	0.596
MMS22L	MMS22-like, DNA repair protein	0.592
H3F3C	H3 histone, family 3C	0.573	Human
NUCKS1	nuclear casein kinase and cyclin-dependent kinase substrate 1	0.565
NASP	nuclear autoantigenic sperm protein (histone-binding)	0.549
H2AFX	H2A histone family, member X	0.543	Human
CDK9	cyclin-dependent kinase 9	0.506
HIST1H1B	histone cluster 1, H1b	0.505
HIST1H3F	histone cluster 1, H3f	0.498
LBR	lamin B receptor	0.482
HMGB1	high mobility group box 1	0.442
NPM1	nucleophosmin (nucleolar phosphoprotein B23, numatrin)	0.430
HIST1H4L	histone cluster 1, H4l	0.411
EP300	E1A binding protein p300	0.384
XRCC6	X-ray repair complementing defective repair in Chinese hamster cells 6	0.378
RAN	RAN, member RAS oncogene family	0.375
INCENP	inner centromere protein antigens 135/155kDa	0.366
SSB	Sjogren syndrome antigen B (autoantigen La)	0.351
RBBP7	retinoblastoma binding protein 7	0.346	Human Yeast Fly
BRD7	bromodomain containing 7	0.346
HIST1H2AK	histone cluster 1, H2ak	0.345	Human
HIST2H2AA3	histone cluster 2, H2aa3	0.343	Human
WHSC1L1	Wolf-Hirschhorn syndrome candidate 1-like 1	0.342
ASF1A	ASF1 anti-silencing function 1 homolog A (S. cerevisiae)	0.339
H2AFV	H2A histone family, member V	0.323
HIST1H3I	histone cluster 1, H3i	0.312
HMGB2	high mobility group box 2	0.312
DUT	deoxyuridine triphosphatase	0.297
HIST2H3C	histone cluster 2, H3c	0.291	Human
SIN3A	SIN3 homolog A, transcription regulator (yeast)	0.282
PARP1	poly (ADP-ribose) polymerase 1	0.276
NR2E3	nuclear receptor subfamily 2, group E, member 3	0.263
HIST1H4I	histone cluster 1, H4i	0.260
HIST1H4C	histone cluster 1, H4c	0.255
SRSF3	serine/arginine-rich splicing factor 3	0.251
SMYD3	SET and MYND domain containing 3	0.244	Mouse
DEK	DEK oncogene	0.236
PRR14	proline rich 14	0.225
MEOX2	mesenchyme homeobox 2	0.222
MRE11A	MRE11 meiotic recombination 11 homolog A (S. cerevisiae)	0.218
MBD1	methyl-CpG binding domain protein 1	0.217
AURKB	aurora kinase B	0.215
HIST2H4B	histone cluster 2, H4b	0.211
ANP32E	acidic (leucine-rich) nuclear phosphoprotein 32 family, member E	0.181	Human
DNMT3A	DNA (cytosine-5-)-methyltransferase 3 alpha	0.181
HIRA	HIR histone cell cycle regulation defective homolog A (S. cerevisiae)	0.177
PA2G4	proliferation-associated 2G4, 38kDa	0.174
CCNT1	cyclin T1	0.174
DOT1L	DOT1-like, histone H3 methyltransferase (S. cerevisiae)	0.159
PRPS1	phosphoribosyl pyrophosphate synthetase 1	0.159
HIST1H2BL	histone cluster 1, H2bl	0.157
NCL	nucleolin	0.156
TLK1	tousled-like kinase 1	0.156
SMC3	structural maintenance of chromosomes 3	0.155
HIST1H3J	histone cluster 1, H3j	0.153
MAGOH	mago-nashi homolog, proliferation-associated (Drosophila)	0.153
H3F3B	H3 histone, family 3B (H3.3B)	0.149
HNRNPC	heterogeneous nuclear ribonucleoprotein C (C1/C2)	0.131
SMAD7	SMAD family member 7	0.124
MSH6	mutS homolog 6 (E. coli)	0.123
BAZ1A	bromodomain adjacent to zinc finger domain, 1A	0.122	Fly
SETMAR	SET domain and mariner transposase fusion gene	0.114
PIAS4	protein inhibitor of activated STAT, 4	0.109
KPNB1	karyopherin (importin) beta 1	0.106
HNRNPA3	heterogeneous nuclear ribonucleoprotein A3	0.103
PRRC2C	proline-rich coiled-coil 2C	0.102
HMGN2	high mobility group nucleosomal binding domain 2	0.098
UBN1	ubinuclein 1	0.097
CHRAC1	chromatin accessibility complex 1	0.094
SFPQ	splicing factor proline/glutamine-rich	0.093
HDAC1	histone deacetylase 1	0.093
POLR1E	polymerase (RNA) I polypeptide E, 53kDa	0.093
ANP32B	acidic (leucine-rich) nuclear phosphoprotein 32 family, member B	0.090
TP53BP1	tumor protein p53 binding protein 1	0.086
HIST3H3	histone cluster 3, H3	0.082	Human
SUMO1	SMT3 suppressor of mif two 3 homolog 1 (S. cerevisiae)	0.077
WT1	Wilms tumor 1	0.077
MESDC2	mesoderm development candidate 2	0.070
EIF4A3	eukaryotic translation initiation factor 4A3	0.068
KDM2A	lysine (K)-specific demethylase 2A	0.068
KDM4A	lysine (K)-specific demethylase 4A	0.067
HIST1H2AH	histone cluster 1, H2ah	0.065	Human
MARCKSL1	MARCKS-like 1	0.064
JMJD6	jumonji domain containing 6	0.064
KDM4B	lysine (K)-specific demethylase 4B	0.064
HIST3H2A	histone cluster 3, H2a	0.061	Human
TMX1	thioredoxin-related transmembrane protein 1	0.060
SUV39H1	suppressor of variegation 3-9 homolog 1 (Drosophila)	0.058
APEX1	APEX nuclease (multifunctional DNA repair enzyme) 1	0.056
BRPF1	bromodomain and PHD finger containing, 1	0.053
H2AFZ	H2A histone family, member Z	0.052
SUPT6H	suppressor of Ty 6 homolog (S. cerevisiae)	0.051
RASSF1	Ras association (RalGDS/AF-6) domain family member 1	0.051
SGOL1	shugoshin-like 1 (S. pombe)	0.049
PRRC2B	proline-rich coiled-coil 2B	0.048
RAD50	RAD50 homolog (S. cerevisiae)	0.048
SCAP	SREBF chaperone	0.048
UBE2I	ubiquitin-conjugating enzyme E2I (UBC9 homolog, yeast)	0.048
HDGF	hepatoma-derived growth factor	0.047
SMARCC1	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1	0.046
RAC1	ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1)	0.046
RSF1	remodeling and spacing factor 1	0.045
RPA1	replication protein A1, 70kDa	0.045
UBTF	upstream binding transcription factor, RNA polymerase I	0.043
SYNCRIP	synaptotagmin binding, cytoplasmic RNA interacting protein	0.043
RFC1	replication factor C (activator 1) 1, 145kDa	0.043
SALL2	sal-like 2 (Drosophila)	0.043
CDKN2A	cyclin-dependent kinase inhibitor 2A (melanoma, p16, inhibits CDK4)	0.042
HNRNPR	heterogeneous nuclear ribonucleoprotein R	0.042
EHMT2	euchromatic histone-lysine N-methyltransferase 2	0.042
RAD21	RAD21 homolog (S. pombe)	0.042
HMGN1	high mobility group nucleosome binding domain 1	0.042
PPIH	peptidylprolyl isomerase H (cyclophilin H)	0.041
SETDB1	SET domain, bifurcated 1	0.041
LMNA	lamin A/C	0.041
SMARCA2	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2	0.040
HIST1H3E	histone cluster 1, H3e	0.039
HAT1	histone acetyltransferase 1	0.039
POGZ	pogo transposable element with ZNF domain	0.038
SFSWAP	splicing factor, suppressor of white-apricot homolog (Drosophila)	0.037
SOX4	SRY (sex determining region Y)-box 4	0.037	Human
WWP2	WW domain containing E3 ubiquitin protein ligase 2	0.037
DR1	down-regulator of transcription 1, TBP-binding (negative cofactor 2)	0.036
NEK1	NIMA (never in mitosis gene a)-related kinase 1	0.035
ILF2	interleukin enhancer binding factor 2, 45kDa	0.035
KLF5	Kruppel-like factor 5 (intestinal)	0.033
TBC1D13	TBC1 domain family, member 13	0.033
CDCA8	cell division cycle associated 8	0.032
ELAVL1	ELAV (embryonic lethal, abnormal vision, Drosophila)-like 1 (Hu antigen R)	0.031
L3MBTL1	l(3)mbt-like 1 (Drosophila)	0.031
APPL1	adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 1	0.031
PARP3	poly (ADP-ribose) polymerase family, member 3	0.031
ARRB1	arrestin, beta 1	0.030
SPEN	spen homolog, transcriptional regulator (Drosophila)	0.029
BPTF	bromodomain PHD finger transcription factor	0.029
BCL7A	B-cell CLL/lymphoma 7A	0.028
KHSRP	KH-type splicing regulatory protein	0.028
FXR1	fragile X mental retardation, autosomal homolog 1	0.028
HIST1H1A	histone cluster 1, H1a	0.028
IPO4	importin 4	0.027
NSL1	NSL1, MIND kinetochore complex component, homolog (S. cerevisiae)	0.026
DHX9	DEAH (Asp-Glu-Ala-His) box polypeptide 9	0.026
RBMX	RNA binding motif protein, X-linked	0.025
KDM5C	lysine (K)-specific demethylase 5C	0.025
SRM	spermidine synthase	0.024
CCNB2	cyclin B2	0.024
PRPF4	PRP4 pre-mRNA processing factor 4 homolog (yeast)	0.024
ORC1	origin recognition complex, subunit 1	0.023
PTGES3	prostaglandin E synthase 3 (cytosolic)	0.021
GAK	cyclin G associated kinase	0.021
RNF168	ring finger protein 168	0.021
TRIM24	tripartite motif containing 24	0.021
PHF20	PHD finger protein 20	0.020
ARID1A	AT rich interactive domain 1A (SWI-like)	0.020
HIST1H4G	histone cluster 1, H4g	0.020	Human
ETS1	v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)	0.020
GMEB2	glucocorticoid modulatory element binding protein 2	0.020
E2F2	E2F transcription factor 2	0.020
YWHAQ	tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide	0.020
MGRN1	mahogunin, ring finger 1	0.020
PRRC2A	proline-rich coiled-coil 2A	0.019
MOBKL1B	MOB1, Mps One Binder kinase activator-like 1B (yeast)	0.019
PELP1	proline, glutamate and leucine rich protein 1	0.019
TAF1A	TATA box binding protein (TBP)-associated factor, RNA polymerase I, A, 48kDa	0.019
SNRPE	small nuclear ribonucleoprotein polypeptide E	0.019
CUX1	cut-like homeobox 1	0.018
BRD3	bromodomain containing 3	0.018	Human
PRKDC	protein kinase, DNA-activated, catalytic polypeptide	0.018
CBX2	chromobox homolog 2	0.018
LMNB1	lamin B1	0.018
KIAA1377	KIAA1377	0.018
PKMYT1	protein kinase, membrane associated tyrosine/threonine 1	0.018
HNRNPD	heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa)	0.018
SLC9A3R2	solute carrier family 9 (sodium/hydrogen exchanger), member 3 regulator 2	0.018
ANKRD11	ankyrin repeat domain 11	0.017
SMARCA4	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4	0.017
RAG1	recombination activating gene 1	0.017
SMARCC2	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2	0.017
PPM1D	protein phosphatase, Mg2+/Mn2+ dependent, 1D	0.017
MCM3	minichromosome maintenance complex component 3	0.017
ITGA4	integrin, alpha 4 (antigen CD49D, alpha 4 subunit of VLA-4 receptor)	0.017
FAM193A	family with sequence similarity 193, member A	0.016
SUPT16H	suppressor of Ty 16 homolog (S. cerevisiae)	0.016	Yeast
SUZ12	suppressor of zeste 12 homolog (Drosophila)	0.016
RECQL	RecQ protein-like (DNA helicase Q1-like)	0.016
TRPC1	transient receptor potential cation channel, subfamily C, member 1	0.016
TRMT5	TRM5 tRNA methyltransferase 5 homolog (S. cerevisiae)	0.016
NSA2	NSA2 ribosome biogenesis homolog (S. cerevisiae)	0.016
SAP30	Sin3A-associated protein, 30kDa	0.016
C17orf79	chromosome 17 open reading frame 79	0.016
SMURF2	SMAD specific E3 ubiquitin protein ligase 2	0.016
TOP1	topoisomerase (DNA) I	0.016
MEF2BNB-MEF2B	MEF2BNB-MEF2B readthrough	0.016
TERF1	telomeric repeat binding factor (NIMA-interacting) 1	0.016
MYB	v-myb myeloblastosis viral oncogene homolog (avian)	0.015
MUL1	mitochondrial E3 ubiquitin protein ligase 1	0.015
SUMO4	SMT3 suppressor of mif two 3 homolog 4 (S. cerevisiae)	0.015
PTPN4	protein tyrosine phosphatase, non-receptor type 4 (megakaryocyte)	0.015
SRSF2	serine/arginine-rich splicing factor 2	0.015
RBM23	RNA binding motif protein 23	0.015
PRMT5	protein arginine methyltransferase 5	0.015
RRM1	ribonucleotide reductase M1	0.014
CDK2	cyclin-dependent kinase 2	0.014
LDHB	lactate dehydrogenase B	0.014
LRIF1	ligand dependent nuclear receptor interacting factor 1	0.014
TMPO	thymopoietin	0.014
ARRB2	arrestin, beta 2	0.014
SPOP	speckle-type POZ protein	0.014
CTCFL	CCCTC-binding factor (zinc finger protein)-like	0.014
SLC2A4	solute carrier family 2 (facilitated glucose transporter), member 4	0.014
ING2	inhibitor of growth family, member 2	0.014
ERH	enhancer of rudimentary homolog (Drosophila)	0.014
TPR	translocated promoter region (to activated MET oncogene)	0.013
RAD51L1	RAD51-like 1 (S. cerevisiae)	0.013
MED6	mediator complex subunit 6	0.013
HDAC6	histone deacetylase 6	0.013
HDGFRP2	hepatoma-derived growth factor-related protein 2	0.013
BRD4	bromodomain containing 4	0.013	Human
GSG2	germ cell associated 2 (haspin)	0.013
FOXG1	forkhead box G1	0.013
TAF1B	TATA box binding protein (TBP)-associated factor, RNA polymerase I, B, 63kDa	0.013
ZNF267	zinc finger protein 267	0.013
SOX5	SRY (sex determining region Y)-box 5	0.012
NUDCD2	NudC domain containing 2	0.012
LOC728026	hypothetical protein LOC728026	0.012
BRD2	bromodomain containing 2	0.012
GNAI3	guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 3	0.012
CD3EAP	CD3e molecule, epsilon associated protein	0.012
SOX9	SRY (sex determining region Y)-box 9	0.012
TONSL	tonsoku-like, DNA repair protein	0.012
CHD4	chromodomain helicase DNA binding protein 4	0.012
CNN3	calponin 3, acidic	0.011
PTK2	PTK2 protein tyrosine kinase 2	0.011
C2orf68	chromosome 2 open reading frame 68	0.011
HIST2H2AB	histone cluster 2, H2ab	0.011	Human
BLM	Bloom syndrome, RecQ helicase-like	0.011
UBB	ubiquitin B	0.011
PCGF2	polycomb group ring finger 2	0.011
C19orf48	chromosome 19 open reading frame 48	0.011
GDI2	GDP dissociation inhibitor 2	0.011
MCM7	minichromosome maintenance complex component 7	0.011
CTDP1	CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) phosphatase, subunit 1	0.011
MSH2	mutS homolog 2, colon cancer, nonpolyposis type 1 (E. coli)	0.011
KPNA2	karyopherin alpha 2 (RAG cohort 1, importin alpha 1)	0.011
MDC1	mediator of DNA-damage checkpoint 1	0.011
TAF3	TAF3 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 140kDa	0.010
HMGB3	high mobility group box 3	0.010
SYMPK	symplekin	0.010
KIF24	kinesin family member 24	0.010
FTH1	ferritin, heavy polypeptide 1	0.010
ZMYND11	zinc finger, MYND-type containing 11	0.010
SMG1	SMG1 homolog, phosphatidylinositol 3-kinase-related kinase (C. elegans)	0.010
USP17L2	ubiquitin specific peptidase 17-like 2	0.010
PSIP1	PC4 and SFRS1 interacting protein 1	0.010
KDM5B	lysine (K)-specific demethylase 5B	0.010
THOC4	THO complex 4	0.010