IMP

Process View

Mus musculus

1 genes annotated in mouse

fibronectin dependent thymocyte migration

The movement of a thymocyte through distinct intrathymic niches (e.g. medulla, cortex), where it receives a unique set of developmental cues required for T-cell development, dependent on fibronectin in the extracellular matrix.

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Known genes in the process in mouse Include functional analogs

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Gene Predictions

Click on a gene's description to view its network relationships with genes known to be involved in "fibronectin dependent thymocyte migration"

Show only novel predictions Show only unknown genes Highlight genes with functional analogs involved in "fibronectin dependent thymocyte migration" (in gray)

Name	Description	Probability	Func Analog Organism
Adam19	a disintegrin and metallopeptidase domain 19 (meltrin beta)	1.000	Mouse
Tgfb2	transforming growth factor, beta 2	0.944
Egfr	epidermal growth factor receptor	0.869
Adam15	a disintegrin and metallopeptidase domain 15 (metargidin)	0.845	Mouse
Klf3	Kruppel-like factor 3 (basic)	0.833
Adam12	a disintegrin and metallopeptidase domain 12 (meltrin alpha)	0.754	Mouse
Hey2	hairy/enhancer-of-split related with YRPW motif 2	0.725
Cxcr7	chemokine (C-X-C motif) receptor 7	0.577
Efnb2	ephrin B2	0.534
Hif1a	hypoxia inducible factor 1, alpha subunit	0.432
Sos1	son of sevenless homolog 1 (Drosophila)	0.415
Jag1	jagged 1	0.396
Il6st	interleukin 6 signal transducer	0.371
Cd44	CD44 antigen	0.369
Ntf3	neurotrophin 3	0.312
Ptpn11	protein tyrosine phosphatase, non-receptor type 11	0.286
Hbegf	heparin-binding EGF-like growth factor	0.286
Gata4	GATA binding protein 4	0.242
Adam17	a disintegrin and metallopeptidase domain 17	0.181	Mouse
Grb2	growth factor receptor bound protein 2	0.140
Lamp2	lysosomal-associated membrane protein 2	0.121
Lgr4	leucine-rich repeat-containing G protein-coupled receptor 4	0.119
Prnp	prion protein	0.110
Jup	junction plakoglobin	0.105
Gja1	gap junction protein, alpha 1	0.103
Glipr2	GLI pathogenesis-related 2	0.094
Dlg4	discs, large homolog 4 (Drosophila)	0.071
Adam9	a disintegrin and metallopeptidase domain 9 (meltrin gamma)	0.068	Mouse
Eea1	early endosome antigen 1	0.065
Foxc2	forkhead box C2	0.061
Bpil1	bactericidal/permeability-increasing protein-like 1	0.060
BC100451	cDNA sequence BC100451	0.057
Efna1	ephrin A1	0.051
Clec4d	C-type lectin domain family 4, member d	0.050
Vmn1r44	vomeronasal 1 receptor 44	0.050
Cacna1c	calcium channel, voltage-dependent, L type, alpha 1C subunit	0.050
Ncam2	neural cell adhesion molecule 2	0.050
Zfpm2	zinc finger protein, multitype 2	0.049
Tsga13	testis specific gene A13	0.048
Trp53	transformation related protein 53	0.046
Allc	allantoicase	0.045
P4ha1	procollagen-proline, 2-oxoglutarate 4-dioxygenase (proline 4-hydroxylase), alpha 1 polypeptide	0.044
Cenpj	centromere protein J	0.041
Ctnnb1	catenin (cadherin associated protein), beta 1	0.040
Gfra2	glial cell line derived neurotrophic factor family receptor alpha 2	0.039
Nr3c1	nuclear receptor subfamily 3, group C, member 1	0.038
Pde1b	phosphodiesterase 1B, Ca2+-calmodulin dependent	0.034
B3galt1	UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 1	0.032
Abca2	ATP-binding cassette, sub-family A (ABC1), member 2	0.032
Gnao1	guanine nucleotide binding protein, alpha O	0.032
Ggta1	glycoprotein galactosyltransferase alpha 1, 3	0.030
Prss40	protease, serine, 40	0.030
Dnm1	dynamin 1	0.030
Aff2	AF4/FMR2 family, member 2	0.030
Cd46	CD46 antigen, complement regulatory protein	0.029
Odf4	outer dense fiber of sperm tails 4	0.028
Shc3	src homology 2 domain-containing transforming protein C3	0.027
Slc25a2	solute carrier family 25 (mitochondrial carrier, ornithine transporter) member 2	0.027
Mmp8	matrix metallopeptidase 8	0.027
Adarb1	adenosine deaminase, RNA-specific, B1	0.027
Cd38	CD38 antigen	0.026
Ovgp1	oviductal glycoprotein 1	0.026
Lyzl1	lysozyme-like 1	0.025
Rara	retinoic acid receptor, alpha	0.025
1700029F12Rik	RIKEN cDNA 1700029F12 gene	0.025
Sirpa	signal-regulatory protein alpha	0.025
Cacna1g	calcium channel, voltage-dependent, T type, alpha 1G subunit	0.025
Olfr73	olfactory receptor 73	0.024
Rnf112	ring finger protein 112	0.024
Fhl5	four and a half LIM domains 5	0.024
Lpar1	lysophosphatidic acid receptor 1	0.023
Adam2	a disintegrin and metallopeptidase domain 2	0.023	Mouse
Rttn	rotatin	0.023
Ccr3	chemokine (C-C motif) receptor 3	0.023
Epb4.1l2	erythrocyte protein band 4.1-like 2	0.023
Odf1	outer dense fiber of sperm tails 1	0.023
Scn1b	sodium channel, voltage-gated, type I, beta	0.023
Cbl	Casitas B-lineage lymphoma	0.022
Rbms1	RNA binding motif, single stranded interacting protein 1	0.022
2610015P09Rik	RIKEN cDNA 2610015P09 gene	0.022
H2afb1	H2A histone family, member B1	0.022
Cxcr4	chemokine (C-X-C motif) receptor 4	0.022
4930544G11Rik	RIKEN cDNA 4930544G11 gene	0.022
Epha6	Eph receptor A6	0.021
Grik2	glutamate receptor, ionotropic, kainate 2 (beta 2)	0.021
Pcdhb1	protocadherin beta 1	0.021
Rps6ka3	ribosomal protein S6 kinase polypeptide 3	0.021
Mak	male germ cell-associated kinase	0.021
Lox	lysyl oxidase	0.021
Capza3	capping protein (actin filament) muscle Z-line, alpha 3	0.021
Sdc3	syndecan 3	0.020
9930013L23Rik	RIKEN cDNA 9930013L23 gene	0.020
Pcdhb10	protocadherin beta 10	0.020
Pkdrej	polycystic kidney disease (polycystin) and REJ (sperm receptor for egg jelly, sea urchin homolog)-like	0.020
Gfra4	glial cell line derived neurotrophic factor family receptor alpha 4	0.020
Nt5c1b	5'-nucleotidase, cytosolic IB	0.020
Nkx2-5	NK2 transcription factor related, locus 5 (Drosophila)	0.020
Ccl3	chemokine (C-C motif) ligand 3	0.019
Tgfbr1	transforming growth factor, beta receptor I	0.019
Npff	neuropeptide FF-amide peptide precursor	0.019
Gm14474	predicted gene 14474	0.019
Lrrc23	leucine rich repeat containing 23	0.018
Nxf2	nuclear RNA export factor 2	0.018
Has2	hyaluronan synthase 2	0.018
4930430A15Rik	RIKEN cDNA 4930430A15 gene	0.018
1700019N19Rik	RIKEN cDNA 1700019N19 gene	0.018
Fkbp6	FK506 binding protein 6	0.017
Atp8b2	ATPase, class I, type 8B, member 2	0.017
Cuzd1	CUB and zona pellucida-like domains 1	0.017
Gabbr1	gamma-aminobutyric acid (GABA) B receptor, 1	0.017
Ckap4	cytoskeleton-associated protein 4	0.017
Sgcd	sarcoglycan, delta (dystrophin-associated glycoprotein)	0.017
Boll	bol, boule-like (Drosophila)	0.017
Zfp385a	zinc finger protein 385A	0.017
Darc	Duffy blood group, chemokine receptor	0.016
Thbs1	thrombospondin 1	0.016
Kif3b	kinesin family member 3B	0.016
Kcna4	potassium voltage-gated channel, shaker-related subfamily, member 4	0.016
1700018F24Rik	RIKEN cDNA 1700018F24 gene	0.016
Sec63	SEC63-like (S. cerevisiae)	0.016
Olfr140	olfactory receptor 140	0.016
Abp1	amiloride binding protein 1 (amine oxidase, copper-containing)	0.016
Slco6c1	solute carrier organic anion transporter family, member 6c1	0.016
Speer4f	spermatogenesis associated glutamate (E)-rich protein 4f	0.016
Serpina5	serine (or cysteine) peptidase inhibitor, clade A, member 5	0.016
Socs3	suppressor of cytokine signaling 3	0.016
Plaur	plasminogen activator, urokinase receptor	0.016
Kcnh1	potassium voltage-gated channel, subfamily H (eag-related), member 1	0.016
Mbd3l1	methyl-CpG binding domain protein 3-like 1	0.016
Pdcl2	phosducin-like 2	0.015
Pbp2	phosphatidylethanolamine binding protein 2	0.015
4921510H08Rik	RIKEN cDNA 4921510H08 gene	0.015
4921530L21Rik	RIKEN cDNA 4921530L21 gene	0.015
Gapdhs	glyceraldehyde-3-phosphate dehydrogenase, spermatogenic	0.015
Apoe	apolipoprotein E	0.015
Eln	elastin	0.015
Grin2a	glutamate receptor, ionotropic, NMDA2A (epsilon 1)	0.015
Rap2c	RAP2C, member of RAS oncogene family	0.015
Ltbp2	latent transforming growth factor beta binding protein 2	0.015
Apaf1	apoptotic peptidase activating factor 1	0.015
Papolb	poly (A) polymerase beta (testis specific)	0.015
Cd209c	CD209c antigen	0.015
Tsnaxip1	translin-associated factor X (Tsnax) interacting protein 1	0.015
Tnfsf9	tumor necrosis factor (ligand) superfamily, member 9	0.015
Pdcd1lg2	programmed cell death 1 ligand 2	0.015
Cd180	CD180 antigen	0.015
Meis3	Meis homeobox 3	0.015
Snap23	synaptosomal-associated protein 23	0.015
Ptgir	prostaglandin I receptor (IP)	0.014
Scube1	signal peptide, CUB domain, EGF-like 1	0.014
Kcna6	potassium voltage-gated channel, shaker-related, subfamily, member 6	0.014
Oas1h	2'-5' oligoadenylate synthetase 1H	0.014
Galntl5	UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 5	0.014
Htra3	HtrA serine peptidase 3	0.014
Plekho2	pleckstrin homology domain containing, family O member 2	0.014
Nr6a1	nuclear receptor subfamily 6, group A, member 1	0.014
Nfkb2	nuclear factor of kappa light polypeptide gene enhancer in B-cells 2, p49/p100	0.014
Nfya	nuclear transcription factor-Y alpha	0.014
Cntn1	contactin 1	0.014
Olfr64	olfactory receptor 64	0.014
Ap2a1	adaptor protein complex AP-2, alpha 1 subunit	0.013
Kcnu1	potassium channel, subfamily U, member 1	0.013
Tnfrsf17	tumor necrosis factor receptor superfamily, member 17	0.013
Treml1	triggering receptor expressed on myeloid cells-like 1	0.013
1700129C05Rik	RIKEN cDNA 1700129C05 gene	0.013
Slc5a4b	solute carrier family 5 (neutral amino acid transporters, system A), member 4b	0.013
Ugcg	UDP-glucose ceramide glucosyltransferase	0.013
4930579C15Rik	RIKEN cDNA 4930579C15 gene	0.013
Meox2	mesenchyme homeobox 2	0.013
Lrrc8c	leucine rich repeat containing 8 family, member C	0.013
Grin2c	glutamate receptor, ionotropic, NMDA2C (epsilon 3)	0.013
Mapk8ip2	mitogen-activated protein kinase 8 interacting protein 2	0.013
Gm10375	predicted gene 10375	0.013
Icam5	intercellular adhesion molecule 5, telencephalin	0.013
Rbfox2	RNA binding protein, fox-1 homolog (C. elegans) 2	0.013
Olig3	oligodendrocyte transcription factor 3	0.013
Tll1	tolloid-like	0.013
Foxc1	forkhead box C1	0.013
Mtl5	metallothionein-like 5, testis-specific (tesmin)	0.013
Galntl1	UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 1	0.013
Cabyr	calcium-binding tyrosine-(Y)-phosphorylation regulated (fibrousheathin 2)	0.013
Ap1s2	adaptor-related protein complex 1, sigma 2 subunit	0.013
Reg3g	regenerating islet-derived 3 gamma	0.013
Mcam	melanoma cell adhesion molecule	0.013
Limk1	LIM-domain containing, protein kinase	0.013
Ncam1	neural cell adhesion molecule 1	0.013
Unc93b1	unc-93 homolog B1 (C. elegans)	0.012
Arhgef2	rho/rac guanine nucleotide exchange factor (GEF) 2	0.012
Ftmt	ferritin mitochondrial	0.012
Mdfic	MyoD family inhibitor domain containing	0.012
Vhl	von Hippel-Lindau tumor suppressor	0.012
Atxn1	ataxin 1	0.012
Mmp9	matrix metallopeptidase 9	0.012
Tnc	tenascin C	0.012
4932425I24Rik	RIKEN cDNA 4932425I24 gene	0.012
4930432K09Rik	RIKEN cDNA 4930432K09 gene	0.012
1700028P14Rik	RIKEN cDNA 1700028P14 gene	0.012
Sh3bgrl	SH3-binding domain glutamic acid-rich protein like	0.012
Ppfia4	protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 4	0.012
Fank1	fibronectin type 3 and ankyrin repeat domains 1	0.012
Nfatc1	nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1	0.012
Ubl4b	ubiquitin-like 4B	0.012
Eps8	epidermal growth factor receptor pathway substrate 8	0.012
Nptx1	neuronal pentraxin 1	0.012
Reg1	regenerating islet-derived 1	0.012
Adcy2	adenylate cyclase 2	0.012
Syt11	synaptotagmin XI	0.012
Nab1	Ngfi-A binding protein 1	0.012
1700019N12Rik	RIKEN cDNA 1700019N12 gene	0.012
Tmem168	transmembrane protein 168	0.012
Ndst4	N-deacetylase/N-sulfotransferase (heparin glucosaminyl) 4	0.012
Msn	moesin	0.012
Cd209b	CD209b antigen	0.012
Prss39	protease, serine, 39	0.012
Ptpn20	protein tyrosine phosphatase, non-receptor type 20	0.012
Pth	parathyroid hormone	0.012
Tmed8	transmembrane emp24 domain containing 8	0.012
Pecam1	platelet/endothelial cell adhesion molecule 1	0.011
Mos	Moloney sarcoma oncogene	0.011
Gfpt2	glutamine fructose-6-phosphate transaminase 2	0.011
Arl4c	ADP-ribosylation factor-like 4C	0.011
Sycp1	synaptonemal complex protein 1	0.011
Itgb1	integrin beta 1 (fibronectin receptor beta)	0.011
Pdlim5	PDZ and LIM domain 5	0.011
Vmn1r46	vomeronasal 1 receptor 46	0.011
Ero1l	ERO1-like (S. cerevisiae)	0.011
Mfi2	antigen p97 (melanoma associated) identified by monoclonal antibodies 133.2 and 96.5	0.011
Foxf1a	forkhead box F1a	0.011
Mpl	myeloproliferative leukemia virus oncogene	0.011
Flna	filamin, alpha	0.011
Pros1	protein S (alpha)	0.011
Akr1cl	aldo-keto reductase family 1, member C-like	0.011
Pappa	pregnancy-associated plasma protein A	0.011
Cr2	complement receptor 2	0.011
Fscn1	fascin homolog 1, actin bundling protein (Strongylocentrotus purpuratus)	0.011
Itga5	integrin alpha 5 (fibronectin receptor alpha)	0.011
Stat3	signal transducer and activator of transcription 3	0.011
Kcnn3	potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3	0.011
4933425L06Rik	RIKEN cDNA 4933425L06 gene	0.011
Pde1c	phosphodiesterase 1C	0.011
Epha3	Eph receptor A3	0.011
Mrgprh	MAS-related GPR, member H	0.011
Lyst	lysosomal trafficking regulator	0.011
Dpysl2	dihydropyrimidinase-like 2	0.011
Sema6d	sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D	0.011
Cyfip1	cytoplasmic FMR1 interacting protein 1	0.011
Matk	megakaryocyte-associated tyrosine kinase	0.011
Nos2	nitric oxide synthase 2, inducible	0.011
4930547C10Rik	RIKEN cDNA 4930547C10 gene	0.011
Fpr3	formyl peptide receptor 3	0.011
Ids	iduronate 2-sulfatase	0.011
Gbgt1	globoside alpha-1,3-N-acetylgalactosaminyltransferase 1	0.011
Adam28	a disintegrin and metallopeptidase domain 28	0.011
Map4k2	mitogen-activated protein kinase kinase kinase kinase 2	0.011
Tubb4	tubulin, beta 4	0.011
Kif5c	kinesin family member 5C	0.011
Sag	retinal S-antigen	0.011
Flt3	FMS-like tyrosine kinase 3	0.011
Kcna2	potassium voltage-gated channel, shaker-related subfamily, member 2	0.011
Spata4	spermatogenesis associated 4	0.011
Ccr6	chemokine (C-C motif) receptor 6	0.011
Epyc	epiphycan	0.011
Fam166a	family with sequence similarity 166, member A	0.011
Mmp16	matrix metallopeptidase 16	0.011
Gprc6a	G protein-coupled receptor, family C, group 6, member A	0.011
Ptch2	patched homolog 2	0.011
Bhlhe40	basic helix-loop-helix family, member e40	0.011
Lce1a2	late cornified envelope 1A2	0.011
Acbd3	acyl-Coenzyme A binding domain containing 3	0.011
Bean1	brain expressed, associated with Nedd4, 1	0.010
Slc26a8	solute carrier family 26, member 8	0.010
Prl7c1	prolactin family 7, subfamily c, member 1	0.010
Kif1a	kinesin family member 1A	0.010
Dmc1	DMC1 dosage suppressor of mck1 homolog, meiosis-specific homologous recombination (yeast)	0.010
Lrrc18	leucine rich repeat containing 18	0.010
Gab2	growth factor receptor bound protein 2-associated protein 2	0.010
Timm8a2	translocase of inner mitochondrial membrane 8 homolog a2 (yeast)	0.010
Cerk	ceramide kinase	0.010
1700030F18Rik	RIKEN cDNA 1700030F18 gene	0.010
Hip1	huntingtin interacting protein 1	0.010
Slc4a8	solute carrier family 4 (anion exchanger), member 8	0.010
Cacna2d3	calcium channel, voltage-dependent, alpha2/delta subunit 3	0.010
Ifna12	interferon alpha 12	0.010
Ankrd36	ankyrin repeat domain 36	0.010
Spnb4	spectrin beta 4	0.010
Insl5	insulin-like 5	0.010
Gabre	gamma-aminobutyric acid (GABA) A receptor, subunit epsilon	0.010
1700029P11Rik	RIKEN cDNA 1700029P11 gene	0.010
Itgb3	integrin beta 3	0.010
Hrh4	histamine receptor H4	0.010
Fscn3	fascin homolog 3, actin-bundling protein, testicular (Strongylocentrotus purpuratus)	0.010
Adcy3	adenylate cyclase 3	0.010
Btg4	B-cell translocation gene 4	0.010
Lat2	linker for activation of T cells family, member 2	0.010
Timp2	tissue inhibitor of metalloproteinase 2	0.010
Myt1l	myelin transcription factor 1-like	0.010
Fcrla	Fc receptor-like A	0.010