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Danio rerio

10 genes annotated in zebrafish

embryonic camera type eye formation

The developmental process pertaining to the initial formation of a camera-type eye from unspecified neurectoderm. This process begins with the differentiation of cells that form the optic field and ends when the optic cup has attained its shape.

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Known genes in the process in zebrafish Include functional analogs

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Gene Predictions

Click on a gene's description to view its network relationships with genes known to be involved in "embryonic camera type eye formation"

Show only novel predictions Show only unknown genes Highlight genes with functional analogs involved in "embryonic camera type eye formation" (in gray)

Name	Description	Probability	Func Analog Organism
tbx1	T-box 1	0.998
wnt1	wingless-type MMTV integration site family, member 1	0.929	Zebrafish
wnt2bb	wingless-type MMTV integration site family, member 2Bb	0.926	Zebrafish
fgf3	fibroblast growth factor 3	0.874
wnt8b	wingless-type MMTV integration site family, member 8b	0.860
bmp4	bone morphogenetic protein 4	0.822
twist3	twist3	0.795
wnt5b	wingless-type MMTV integration site family, member 5b	0.763	Zebrafish
lmx1b.1	LIM homeobox transcription factor 1, beta 1	0.762
wnt10b	wingless-type MMTV integration site family, member 10b	0.733	Zebrafish
ndr2	nodal-related 2	0.641
vax2	ventral anterior homeobox 2	0.615
lhx1b	LIM homeobox 1b	0.607	Zebrafish
dharma	dharma	0.580
dlx2a	distal-less homeobox gene 2a	0.573
twist1a	twist1a	0.570
znf503	zinc finger protein 503	0.551
lhx2b	LIM homeobox 2b	0.528	Zebrafish
foxa2	forkhead box A2	0.515
dld	deltaD	0.510
wnt3a	wingless-type MMTV integration site family, member 3A	0.489	Zebrafish
fzd10	frizzled homolog 10	0.475	Zebrafish
gbx2	gastrulation brain homeo box 2	0.474
dbx1a	developing brain homeobox 1a	0.467
sim1a	single-minded homolog 1a (Drosophila)	0.446
tbx5a	T-box 5a	0.423
eya1	eyes absent homolog 1	0.412
dkk1b	dickkopf 1b	0.411
pitx2	paired-like homeodomain transcription factor 2	0.396
grem2	gremlin 2, cysteine knot superfamily	0.380
lhx5	LIM homeobox 5	0.373	Zebrafish
six2a	sine oculis-related homeobox 2a	0.372
shha	sonic hedgehog a	0.365
hand2	heart and neural crest derivatives expressed transcript 2	0.347
foxd3	forkhead box D3	0.338
gli1	GLI-Kruppel family member 1	0.305
hnf1ba	HNF1 homeobox Ba	0.303
eng2a	engrailed 2a	0.302
osr2	odd-skipped related 2 (Drosophila)	0.293
shhb	sonic hedgehog b	0.285
dlx4a	distal-less homeobox gene 4a	0.283
wnt4a	wingless-type MMTV integration site family, member 4a	0.278	Zebrafish
dla	deltaA	0.256
fgf10a	fibroblast growth factor 10a	0.256
col11a2	collagen type XI alpha-2	0.255
dlx2b	distal-less homeobox gene 2b	0.253
lmx1b.2	LIM homeobox transcription factor 1, beta 2	0.244
hmx4	H6 family homeobox 4	0.241
wnt9a	wingless-type MMTV integration site family, member 9A	0.240	Zebrafish
robo2	roundabout homolog 2	0.239
boc	brother of CDO	0.234
hoxa2b	homeo box A2b	0.233
runx3	runt-related transcription factor 3	0.227
cyp26c1	cytochrome P450, family 26, subfamily C, polypeptide 1	0.217
wnt10a	wingless-type MMTV integration site family, member 10a	0.216	Zebrafish
sfrp1a	secreted frizzled-related protein 1a	0.213
wnt3	wingless-type MMTV integration site family, member 3	0.212	Zebrafish
foxn4	forkhead box N4	0.207
ntn1b	netrin 1b	0.201
lhx6	LIM homeobox 6	0.185	Zebrafish
gbx1	gastrulation brain homeobox 1	0.179
chd	chordin	0.158
notch3	notch homolog 3	0.158
pitx3	paired-like homeodomain transcription factor 3	0.152	Zebrafish
bmp2a	bone morphogenetic protein 2a	0.150
ptch2	patched 2	0.150
hoxa13b	homeo box A13b	0.146
wnt11r	wingless-type MMTV integration site family, member 11, related	0.145	Zebrafish
dlx1a	distal-less homeobox gene 1a	0.141
prdm1a	PR domain containing 1a, with ZNF domain	0.140
lef1	lymphocyte enhancer binding factor 1	0.139
nog1	noggin 1	0.138
vsx1	visual system homeobox 1 homolog, chx10-like	0.137
wnt7ba	wingless-type MMTV integration site family, member 7Ba	0.135	Zebrafish
six4b	sine oculis homeobox homolog 4b	0.135
hoxb5b	homeo box B5b	0.134
fli1a	friend leukemia integration 1a	0.134
oprd1b	opioid receptor, delta 1b	0.132
etv2	ets variant gene 2	0.132
wnt11	wingless-type MMTV integration site family, member 11	0.129
slc6a6	solute carrier family 6 (neurotransmitter transporter, taurine), member 6	0.128
sox2	SRY-box containing gene 2	0.124
vax1	ventral anterior homeobox 1	0.120
fzd8a	frizzled homolog 8a	0.120
mab21l2	mab-21-like 2	0.119
atoh7	atonal homolog 7	0.116
gyltl1b	glycosyltransferase-like 1b	0.116
dlx6a	distal-less homeobox gene 6a	0.116
sox1a	SRY-box containing gene 1a	0.113
mxtx2	mix-type homeobox gene 2	0.112
fn1	fibronectin 1	0.106
itgav	integrin, alpha V	0.106
neurod4	neurogenic differentiation 4	0.106
irx1a	iroquois homeobox protein 1, a	0.105
fgf17	fibroblast growth factor 17	0.105
lft2	lefty2	0.103
map2k4a	mitogen-activated protein kinase kinase 4a	0.097
pax8	paired box gene 8	0.096
hoxd4a	homeo box D4a	0.092
tbx2b	T-box 2b	0.091
pmp22a	peripheral myelin protein 22a	0.090
foxa1	forkhead box A1	0.089
dlx3b	distal-less homeobox gene 3b	0.089
lmo4a	LIM domain only 4a	0.088
neurog1	neurogenin 1	0.087
dbx1b	developing brain homeobox 1b	0.087
epb4.1l4	erythrocyte protein band 4.1-like 4	0.085
wif1	wnt inhibitory factor 1	0.084
ephb4b	eph receptor B4b	0.083
nkx3.2	NK3 homeobox 2	0.080
zic3	zic family member 3 heterotaxy 1 (odd-paired homolog, Drosophila)	0.080
pea3	ETS-domain transcription factor pea3	0.080
lamb1a	laminin, beta 1a	0.074
wnt7aa	wingless-type MMTV integration site family, member 7Aa	0.074	Zebrafish
nrarpa	notch-regulated ankyrin repeat protein a	0.073
klf4	Kruppel-like factor 4	0.073
flh	floating head	0.073
fgfr4	fibroblast growth factor receptor 4	0.071
hoxb5a	homeo box B5a	0.070
cdkn1c	cyclin-dependent kinase inhibitor 1C (p57, Kip2)	0.068
hmx1	H6 homeo box 1	0.067
sim2	single-minded homolog 2 (Drosophila)	0.067
barx1	BarH-like homeobox 1	0.064
lft1	lefty1	0.062
fzd9b	frizzled homolog 9b	0.062	Zebrafish
otx2	orthodenticle homolog 2	0.062
hhip	hedgehog interacting protein	0.060
znf703	zinc finger protein 703	0.060
fgf4	fibroblast growth factor 4	0.057
sfrp5	secreted frizzled-related protein 5	0.056
notch2	notch homolog 2	0.056
admp	anti-dorsalizing morphogenic protein	0.055
oep	one-eyed pinhead	0.054
sox4b	SRY-box containing gene 4b	0.054
fgfr1b	fibroblast growth factor receptor 1b	0.053
barhl2	BarH-like 2	0.052
eng2b	engrailed 2b	0.051
sp5l	Sp5 transcription factor-like	0.051
lhx3	LIM homeobox 3	0.049
tgfb2	transforming growth factor, beta 2	0.049
otx1a	orthodenticle homolog 1a	0.048
tcf7l2	transcription factor 7-like 2 (T-cell specific, HMG-box)	0.047
nanos3	nanos homolog 3	0.046
dlx4b	distal-less homeobox gene 4b	0.046
foxh1	forkhead box H1	0.046
mib	mind bomb	0.046
gsc	goosecoid	0.045
jag2	jagged 2	0.045
epha4b	eph receptor A4b	0.045
wnt9b	wingless-type MMTV integration site family, member 9B	0.045	Zebrafish
rbpja	recombination signal binding protein for immunoglobulin kappa J region a	0.044
mecom	MDS1 and EVI1 complex locus	0.044
wnt16	wingless-type MMTV integration site family, member 16	0.044
eomesa	eomesodermin homolog a	0.043
gata3	GATA-binding protein 3	0.041
rest	RE1-silencing transcription factor	0.040
dhrs3a	dehydrogenase/reductase (SDR family) member 3a	0.039
nkx2.1b	NK2 homeobox 1b	0.039
ephb3a	eph receptor B3a	0.039
cart1	cartilage paired-class homeoprotein 1	0.038
spaw	southpaw	0.037
gli2a	GLI-Kruppel family member GLI2a	0.037
cdx4	caudal type homeo box transcription factor 4	0.037
dmbx1a	diencephalon/mesencephalon homeobox 1a	0.036
fgfr2	fibroblast growth factor receptor 2	0.035
fzd7a	frizzled homolog 7a	0.035
hoxc4a	homeo box C4a	0.034
nkx1.2la	NK1 transcription factor related 2-like,a	0.034
chrna2a	cholinergic receptor, nicotinic, alpha polypeptide 2a (neuronal)	0.034
her5	hairy-related 5	0.034
irx1b	iroquois homeobox protein 1, b	0.034
ptch1	patched 1	0.033
tfap2c	transcription factor AP-2 gamma (activating enhancer binding protein 2 gamma)	0.033
ntn1a	netrin 1a	0.033
dlx5a	distal-less homeobox gene 5a	0.032
wnt2	wingless-type MMTV integration site family member 2	0.032	Zebrafish
gata2a	GATA-binding protein 2a	0.031
nr2e1	nuclear receptor subfamily 2, group E, member 1	0.031
tlx2	T-cell leukemia, homeobox 2	0.030
otx1b	orthodenticle homolog 1b	0.030
ihhb	Indian hedgehog homolog b	0.029
meis3	myeloid ecotropic viral integration site 3	0.029
osr1	odd-skipped related 1 (Drosophila)	0.029
tbx4	T-box 4	0.028
wnt7bb	wingless-type MMTV integration site family, member 7Bb	0.028
eng1a	engrailed 1a	0.027
frzb	frizzled-related protein	0.026	Zebrafish
runx1	runt-related transcription factor 1	0.026
six4a	sine oculis homeobox homolog 4a	0.026
snai1b	snail homolog 1b (Drosophila)	0.025
tbx15	T-box 15	0.025
si:dkey-273o13.1	si:dkey-273o13.1	0.025
sult1st4	sulfotransferase family 1, cytosolic sulfotransferase 4	0.024
spry2	sprouty homolog 2	0.024
dkk3	dickkopf homolog 3 (Xenopus laevis)	0.024
elavl3	ELAV (embryonic lethal, abnormal vision, Drosophila)-like 3 (Hu antigen C)	0.024
tbx2a	T-box gene 2a	0.023
hoxd11a	homeo box D11a	0.023
tp63	tumor protein p63	0.023
oprd1a	opioid receptor, delta 1a	0.023
foxg1a	forkhead box G1a	0.023
fgf8b	fibroblast growth factor 8 b	0.023
foxc1a	forkhead box C1a	0.023
prdm14	PR domain containing 14	0.023
ism1	isthmin 1	0.022
jag1b	jagged 1b	0.022
foxj1b	forkhead box J1b	0.022
efna3b	ephrin A3b	0.022
sulf1	sulfatase 1	0.022
chrna6	cholinergic receptor, nicotinic, alpha 6	0.022
emx1	empty spiracles homeobox 1	0.022
rspo3	R-spondin 3 homolog (Xenopus laevis)	0.022
bhlhe41	basic helix-loop-helix family, member e41	0.022
si:ch211-173o4.2	si:ch211-173o4.2	0.021
nkx2.1a	NK2 homeobox 1a	0.021
fsta	follistatin a	0.021
pcdh18b	protocadherin 18b	0.021
hhex	hematopoietically expressed homeobox	0.020
dlc	deltaC	0.020
olig3	oligodendrocyte transcription factor 3	0.020
arx	aristaless related homeobox	0.020
gdf6b	growth differentiation factor 6b	0.020
ptprf	protein tyrosine phosphatase, receptor type, F	0.019
dcc	deleted in colorectal carcinoma	0.019
irx4a	iroquois homeobox protein 4a	0.019
ihha	Indian hedgehog homolog a	0.019
zfyve26	zinc finger, FYVE domain containing 26	0.019
tcf21	transcription factor 21	0.019
LOC100000500	sclerostin-like	0.019
ier2	immediate early response 2	0.019
bmp2b	bone morphogenetic protein 2b	0.018
notum3	notum 3	0.018
ndr1	nodal-related 1	0.018
foxc1b	forkhead box C1b	0.018
tbx18	T-box 18	0.018
mll	myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila)	0.018
oprk1	opioid receptor, kappa 1	0.018
tal2	T-cell acute lymphocytic leukemia 2	0.017
nkx2.3	NK2 transcription factor related 3	0.017
ldb2b	LIM-domain binding factor 2b	0.017
gli2b	GLI-Kruppel family member GLI2b	0.017
fzd5	frizzled homolog 5	0.017	Zebrafish
foxa3	forkhead box A3	0.017
col2a1a	collagen type II, alpha-1a	0.016
ascl1a	achaete-scute complex-like 1a (Drosophila)	0.016
hoxb3a	homeo box B3a	0.016
sox32	SRY-box containing gene 32	0.016
atp1a2a	ATPase, Na+/K+ transporting, alpha 2a polypeptide	0.016
pax9	paired box gene 9	0.016
adcyap1r1	adenylate cyclase activating polypeptide 1 (pituitary) receptor type I	0.016
aldh1a2	aldehyde dehydrogenase 1 family, member A2	0.016
myf6	myogenic factor 6	0.016
rx3	retinal homeobox gene 3	0.016
irx5a	iroquois homeobox protein 5a	0.015
fzd8b	frizzled homolog 8b	0.015	Zebrafish
msxc	muscle segment homeobox C	0.015
sfrp2	secreted frizzled-related protein 2	0.015
wnt2ba	wingless-type MMTV integration site family, member 2Ba	0.015	Zebrafish
ednra	endothelin receptor type A	0.015
lama5	laminin, alpha 5	0.015
her8a	hairy-related 8a	0.015
smarca4	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4	0.015
tbx16	T-box gene 16	0.015
sox10	SRY-box containing gene 10	0.015
nkd2	naked cuticle homolog 2 and naked 2a	0.015
sema3aa	semaphorin 3aa	0.014
tpbgl	trophoblast glycoprotein-like	0.014
amotl2a	angiomotin like 2a	0.014
otpa	orthopedia homolog a	0.014
brd4	bromodomain containing 4	0.014
angpt1	angiopoietin 1	0.014
dlb	deltaB	0.014
fibin	fin bud initiation factor	0.014
lrrc6	leucine rich repeat containing 6	0.014
nkd1	naked cuticle homolog 1 (Drosophila)	0.014
dbh	dopamine beta hydroxylase	0.014
emx2	empty spiracles homeobox 2	0.014
cmlc1	cardiac myosin light chain-1	0.014
arl4ab	ADP-ribosylation factor-like 4ab	0.014
hnf4a	hepatocyte nuclear factor 4, alpha	0.014
sox21b	SRY-box containing gene 21 b	0.013
hmx3	homeo box (H6 family) 3	0.013
lect1	leukocyte cell derived chemotaxin 1	0.013
pcdh8	protocadherin 8	0.013
cobl	cordon-bleu homolog (mouse)	0.013
sox19a	SRY-box containing gene 19a	0.013
hbbe3	hemoglobin beta embryonic-3	0.013
nrxn2a	neurexin 2a	0.013
cxcr4a	chemokine (C-X-C motif) receptor 4a	0.013
mmp2	matrix metalloproteinase 2	0.012
barhl1.2	BarH-like 1.2	0.012
bon	bonnie and clyde	0.012
pcdh18a	protocadherin 18a	0.012
nkx2.2b	NK2 transcription factor related 2b	0.012
mapk8b	mitogen-activated protein kinase 8b	0.012
myf5	myogenic factor 5	0.012
hlxb9la	homeo box HB9 like a	0.012
alpi	alkaline phosphatase, intestinal	0.012
pdlim7	PDZ and LIM domain 7	0.012
hoxb4a	homeo box B4a	0.011
rerea	arginine-glutamic acid dipeptide (RE) repeats a	0.011
gdnf	glial cell derived neurotrophic factor	0.011
smo	smoothened homolog (Drosophila)	0.011
zic6	zic family member 6	0.011
kop	askopos	0.011
olig2	oligodendrocyte lineage transcription factor 2	0.011
insm1b	insulinoma-associated 1b	0.011
dact2	dapper homolog 2, antagonist of beta-catenin (xenopus)	0.011
map2k4b	mitogen-activated protein kinase kinase 4b	0.011
msxb	muscle segment homeobox B	0.011
axin2	axin 2 (conductin, axil)	0.011
prl	prolactin	0.011
lhx1a	LIM homeobox 1a	0.011	Zebrafish
col10a1	collagen, type X, alpha 1	0.011
evx1	even-skipped homeobox 1	0.011
scube2	signal peptide, CUB domain, EGF-like 2	0.010
tnnt2a	troponin T2a, cardiac	0.010
buc	bucky ball	0.010
igfbp3	insulin-like growth factor binding protein 3	0.010
csnk1a1	casein kinase 1, alpha 1	0.010
glcea	glucuronyl C5-epimerase a	0.010
her9	hairy-related 9	0.010
bmpr1aa	bone morphogenetic protein receptor, type 1aa	0.010