IMP

Process View

Homo sapiens

35 genes annotated in human

Multi-species View

viral transcription

GO:0019083

The process by which a viral genome, or part of a viral genome, is transcribed within the host cell.

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Known genes in the process in human Include functional analogs

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Gene Predictions

Click on a gene's description to view its network relationships with genes known to be involved in "viral transcription"

Show only novel predictions Show only unknown genes Highlight genes with functional analogs involved in "viral transcription" (in gray)

Name	Description	Probability	Func Analog Organism
SMARCA4	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4	0.974
SP1	Sp1 transcription factor	0.965
JUN	jun proto-oncogene	0.914
HDAC1	histone deacetylase 1	0.911
EP300	E1A binding protein p300	0.898
UBE2V1	ubiquitin-conjugating enzyme E2 variant 1	0.830
GABPA	GA binding protein transcription factor, alpha subunit 60kDa	0.790
SMARCC1	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1	0.754
ARID1A	AT rich interactive domain 1A (SWI-like)	0.672
IFITM3	interferon induced transmembrane protein 3 (1-8U)	0.644
SP110	SP110 nuclear body protein	0.612	Human
IFITM1	interferon induced transmembrane protein 1 (9-27)	0.571	Human
GFM1	G elongation factor, mitochondrial 1	0.552
IFITM2	interferon induced transmembrane protein 2 (1-8D)	0.512	Human
SIN3A	SIN3 homolog A, transcription regulator (yeast)	0.509
FOS	FBJ murine osteosarcoma viral oncogene homolog	0.447
HDAC2	histone deacetylase 2	0.435	Human
CCR5	chemokine (C-C motif) receptor 5	0.425
TRIM43	tripartite motif containing 43	0.411
ARID1B	AT rich interactive domain 1B (SWI1-like)	0.352
IRF9	interferon regulatory factor 9	0.326
SMARCC2	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2	0.325
SMARCD1	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1	0.319
DICER1	dicer 1, ribonuclease type III	0.319
PAX3	paired box 3	0.315
PRKRA	protein kinase, interferon-inducible double stranded RNA dependent activator	0.310	Human
EIF2AK2	eukaryotic translation initiation factor 2-alpha kinase 2	0.302
CREBBP	CREB binding protein	0.295	Human
ARID2	AT rich interactive domain 2 (ARID, RFX-like)	0.288
HIPK2	homeodomain interacting protein kinase 2	0.288
TRIM39	tripartite motif containing 39	0.288	Human
CCL4	chemokine (C-C motif) ligand 4	0.264
IFI44	interferon-induced protein 44	0.254
NCOR1	nuclear receptor corepressor 1	0.212
TRIM21	tripartite motif containing 21	0.208
ZFP36	zinc finger protein 36, C3H type, homolog (mouse)	0.198
SMARCE1	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1	0.197
TP53	tumor protein p53	0.197
SMAD3	SMAD family member 3	0.197
UBE2U	ubiquitin-conjugating enzyme E2U (putative)	0.191
CTNNB1	catenin (cadherin-associated protein), beta 1, 88kDa	0.190
DYRK1A	dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A	0.160
UBE2D4	ubiquitin-conjugating enzyme E2D 4 (putative)	0.146
SMAD4	SMAD family member 4	0.144
OAS1	2',5'-oligoadenylate synthetase 1, 40/46kDa	0.139
IL8	interleukin 8	0.131
SKIL	SKI-like oncogene	0.128
UBE2L6	ubiquitin-conjugating enzyme E2L 6	0.127
RB1	retinoblastoma 1	0.119
SIRT1	sirtuin 1	0.109
HCFC1	host cell factor C1 (VP16-accessory protein)	0.100
CCL8	chemokine (C-C motif) ligand 8	0.099	Human
KDM6A	lysine (K)-specific demethylase 6A	0.092
CXCL1	chemokine (C-X-C motif) ligand 1 (melanoma growth stimulating activity, alpha)	0.090
CBX5	chromobox homolog 5	0.087
CXCL2	chemokine (C-X-C motif) ligand 2	0.087
IFI16	interferon, gamma-inducible protein 16	0.087
ATF3	activating transcription factor 3	0.087
WWP2	WW domain containing E3 ubiquitin protein ligase 2	0.080
PBRM1	polybromo 1	0.080
FOSB	FBJ murine osteosarcoma viral oncogene homolog B	0.079
FOXD3	forkhead box D3	0.079
PLSCR1	phospholipid scramblase 1	0.075
NMI	N-myc (and STAT) interactor	0.074
MED15	mediator complex subunit 15	0.073
CXCL3	chemokine (C-X-C motif) ligand 3	0.072
IL1B	interleukin 1, beta	0.071
MX1	myxovirus (influenza virus) resistance 1, interferon-inducible protein p78 (mouse)	0.071
PPP1R15A	protein phosphatase 1, regulatory (inhibitor) subunit 15A	0.071
DDX58	DEAD (Asp-Glu-Ala-Asp) box polypeptide 58	0.068
SOX2	SRY (sex determining region Y)-box 2	0.068
CCL13	chemokine (C-C motif) ligand 13	0.065	Human
USF1	upstream transcription factor 1	0.064
LIN28B	lin-28 homolog B (C. elegans)	0.064
TRIM5	tripartite motif containing 5	0.064	Human
YY1	YY1 transcription factor	0.060
OAS2	2'-5'-oligoadenylate synthetase 2, 69/71kDa	0.059
ZNF263	zinc finger protein 263	0.058
CCL2	chemokine (C-C motif) ligand 2	0.058	Human
IFI35	interferon-induced protein 35	0.057
CCL3	chemokine (C-C motif) ligand 3	0.056
BAZ1B	bromodomain adjacent to zinc finger domain, 1B	0.056
KAT2B	K(lysine) acetyltransferase 2B	0.054
C19orf66	chromosome 19 open reading frame 66	0.054
TBP	TATA box binding protein	0.053
CCL18	chemokine (C-C motif) ligand 18 (pulmonary and activation-regulated)	0.053	Human
CCR7	chemokine (C-C motif) receptor 7	0.051
ADAR	adenosine deaminase, RNA-specific	0.051
HMGA1	high mobility group AT-hook 1	0.051	Human
ETS1	v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)	0.050
BST2	bone marrow stromal cell antigen 2	0.048
CXCL9	chemokine (C-X-C motif) ligand 9	0.047
MAGEA4	melanoma antigen family A, 4	0.046
IL6	interleukin 6 (interferon, beta 2)	0.046
MX2	myxovirus (influenza virus) resistance 2 (mouse)	0.045
MAPK8	mitogen-activated protein kinase 8	0.044
FOSL1	FOS-like antigen 1	0.043
SP100	SP100 nuclear antigen	0.041
CCL5	chemokine (C-C motif) ligand 5	0.041
PML	promyelocytic leukemia	0.040
TRIM63	tripartite motif containing 63	0.039	Human
DYDC1	DPY30 domain containing 1	0.038
STAT1	signal transducer and activator of transcription 1, 91kDa	0.038
CHD4	chromodomain helicase DNA binding protein 4	0.037
STAT2	signal transducer and activator of transcription 2, 113kDa	0.035
HLA-E	major histocompatibility complex, class I, E	0.034
RBBP4	retinoblastoma binding protein 4	0.034
XIAP	X-linked inhibitor of apoptosis	0.033
ZNF473	zinc finger protein 473	0.033
JUND	jun D proto-oncogene	0.033	Human
PHF11	PHD finger protein 11	0.032
UBE2I	ubiquitin-conjugating enzyme E2I (UBC9 homolog, yeast)	0.031
USF2	upstream transcription factor 2, c-fos interacting	0.030	Human
SREBF1	sterol regulatory element binding transcription factor 1	0.030
DCAF7	DDB1 and CUL4 associated factor 7	0.030
RNF5	ring finger protein 5	0.030
HMOX2	heme oxygenase (decycling) 2	0.030
PARP12	poly (ADP-ribose) polymerase family, member 12	0.029
CCR4	chemokine (C-C motif) receptor 4	0.029
TRIM17	tripartite motif containing 17	0.029	Human
IER2	immediate early response 2	0.029
IFI6	interferon, alpha-inducible protein 6	0.029
TRIM33	tripartite motif containing 33	0.029
TAF13	TAF13 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 18kDa	0.028
ZFP28	zinc finger protein 28 homolog (mouse)	0.028
MYD88	myeloid differentiation primary response gene (88)	0.028
SFPQ	splicing factor proline/glutamine-rich	0.028
OCIAD1	OCIA domain containing 1	0.027
TOP2B	topoisomerase (DNA) II beta 180kDa	0.027
NAMPT	nicotinamide phosphoribosyltransferase	0.027
CCL22	chemokine (C-C motif) ligand 22	0.027	Human
SOX10	SRY (sex determining region Y)-box 10	0.027
DPP4	dipeptidyl-peptidase 4	0.026
EXOSC10	exosome component 10	0.026
TCF3	transcription factor 3 (E2A immunoglobulin enhancer binding factors E12/E47)	0.026
EGR1	early growth response 1	0.026
CXCL5	chemokine (C-X-C motif) ligand 5	0.026
B2M	beta-2-microglobulin	0.025
CXCL13	chemokine (C-X-C motif) ligand 13	0.025
TRIM26	tripartite motif containing 26	0.025
IRF2	interferon regulatory factor 2	0.025
TCF4	transcription factor 4	0.025
RUNX3	runt-related transcription factor 3	0.024
DTX3L	deltex 3-like (Drosophila)	0.024
IL10	interleukin 10	0.024
SKI	v-ski sarcoma viral oncogene homolog (avian)	0.024
GLIS2	GLIS family zinc finger 2	0.023
ARRB1	arrestin, beta 1	0.023
PTGS2	prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)	0.023
ADNP	activity-dependent neuroprotector homeobox	0.023
PDPK1	3-phosphoinositide dependent protein kinase-1	0.022
MKRN3	makorin ring finger protein 3	0.021
CCL7	chemokine (C-C motif) ligand 7	0.021	Human
SAMD9	sterile alpha motif domain containing 9	0.021
EIF2C2	eukaryotic translation initiation factor 2C, 2	0.021
ZMYM2	zinc finger, MYM-type 2	0.021
SS18	synovial sarcoma translocation, chromosome 18	0.020
POU2F1	POU class 2 homeobox 1	0.020	Human
SMARCA5	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5	0.020
ICAM1	intercellular adhesion molecule 1	0.020
NCOR2	nuclear receptor corepressor 2	0.020
IL2RB	interleukin 2 receptor, beta	0.020
EED	embryonic ectoderm development	0.020
KLF6	Kruppel-like factor 6	0.020
RELA	v-rel reticuloendotheliosis viral oncogene homolog A (avian)	0.019
TCF7L2	transcription factor 7-like 2 (T-cell specific, HMG-box)	0.019	Human
PSMB9	proteasome (prosome, macropain) subunit, beta type, 9 (large multifunctional peptidase 2)	0.019
BCL6	B-cell CLL/lymphoma 6	0.019
TRIM52	tripartite motif containing 52	0.019
MECP2	methyl CpG binding protein 2 (Rett syndrome)	0.019
CARM1	coactivator-associated arginine methyltransferase 1	0.019
CXCL6	chemokine (C-X-C motif) ligand 6 (granulocyte chemotactic protein 2)	0.019
DHX30	DEAH (Asp-Glu-Ala-His) box polypeptide 30	0.019
AKT2	v-akt murine thymoma viral oncogene homolog 2	0.019
TRANK1	tetratricopeptide repeat and ankyrin repeat containing 1	0.019
UHRF2	ubiquitin-like with PHD and ring finger domains 2	0.018
CCR1	chemokine (C-C motif) receptor 1	0.018
SMARCA2	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2	0.018	Human
RPS6KA5	ribosomal protein S6 kinase, 90kDa, polypeptide 5	0.018
IRF7	interferon regulatory factor 7	0.018
RGS1	regulator of G-protein signaling 1	0.018
EIF2C1	eukaryotic translation initiation factor 2C, 1	0.018
TLE1	transducin-like enhancer of split 1 (E(sp1) homolog, Drosophila)	0.018
RELB	v-rel reticuloendotheliosis viral oncogene homolog B	0.018
BRAP	BRCA1 associated protein	0.018
TCF12	transcription factor 12	0.018
JUNB	jun B proto-oncogene	0.018	Human
LRSAM1	leucine rich repeat and sterile alpha motif containing 1	0.018
FTL	ferritin, light polypeptide	0.017
SMARCD2	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2	0.017
MDM2	Mdm2 p53 binding protein homolog (mouse)	0.017
USP7	ubiquitin specific peptidase 7 (herpes virus-associated)	0.017
BATF	basic leucine zipper transcription factor, ATF-like	0.017
FCER2	Fc fragment of IgE, low affinity II, receptor for (CD23)	0.017
EBI3	Epstein-Barr virus induced 3	0.017
DDX60	DEAD (Asp-Glu-Ala-Asp) box polypeptide 60	0.017
CXCL10	chemokine (C-X-C motif) ligand 10	0.017
IFNG	interferon, gamma	0.016
RCOR1	REST corepressor 1	0.016
MTRNR2L1	MT-RNR2-like 1	0.016
RNF2	ring finger protein 2	0.016
TRIM27	tripartite motif containing 27	0.016
TNFRSF9	tumor necrosis factor receptor superfamily, member 9	0.016
BTN3A3	butyrophilin, subfamily 3, member A3	0.016
LY6E	lymphocyte antigen 6 complex, locus E	0.016
HIC1	hypermethylated in cancer 1	0.015
MYB	v-myb myeloblastosis viral oncogene homolog (avian)	0.015
MMP12	matrix metallopeptidase 12 (macrophage elastase)	0.015
CCL20	chemokine (C-C motif) ligand 20	0.015	Human
CBX1	chromobox homolog 1	0.015
IL21R	interleukin 21 receptor	0.015
NCOA6	nuclear receptor coactivator 6	0.015
SMARCB1	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1	0.015
TRIM34	tripartite motif containing 34	0.015
NFYA	nuclear transcription factor Y, alpha	0.015
RIPK1	receptor (TNFRSF)-interacting serine-threonine kinase 1	0.015
ZNRF1	zinc and ring finger 1	0.015
TRIM22	tripartite motif containing 22	0.015	Human
DNMT3B	DNA (cytosine-5-)-methyltransferase 3 beta	0.015
TNIK	TRAF2 and NCK interacting kinase	0.014
LEF1	lymphoid enhancer-binding factor 1	0.014
SELE	selectin E	0.014
IL7R	interleukin 7 receptor	0.014
IL1A	interleukin 1, alpha	0.014
DUSP8	dual specificity phosphatase 8	0.014
RUNX1	runt-related transcription factor 1	0.014
EPM2A	epilepsy, progressive myoclonus type 2A, Lafora disease (laforin)	0.014
ETS2	v-ets erythroblastosis virus E26 oncogene homolog 2 (avian)	0.014
BTRC	beta-transducin repeat containing	0.014
IGF2BP1	insulin-like growth factor 2 mRNA binding protein 1	0.014
CCL11	chemokine (C-C motif) ligand 11	0.013	Human
DNAJB2	DnaJ (Hsp40) homolog, subfamily B, member 2	0.013
CDKN1A	cyclin-dependent kinase inhibitor 1A (p21, Cip1)	0.013
RNF41	ring finger protein 41	0.013
TRIM8	tripartite motif containing 8	0.013	Mouse
MAP2K7	mitogen-activated protein kinase kinase 7	0.013
FUT6	fucosyltransferase 6 (alpha (1,3) fucosyltransferase)	0.013
CD83	CD83 molecule	0.013
PABPN1	poly(A) binding protein, nuclear 1	0.013
GLTPD1	glycolipid transfer protein domain containing 1	0.013
CDH2	cadherin 2, type 1, N-cadherin (neuronal)	0.013
TRIM35	tripartite motif containing 35	0.013
TRIM38	tripartite motif containing 38	0.013	Human
MID1	midline 1 (Opitz/BBB syndrome)	0.013	Human
IL3	interleukin 3 (colony-stimulating factor, multiple)	0.012
TRIM41	tripartite motif containing 41	0.012	Human
MCOLN1	mucolipin 1	0.012
HIVEP1	human immunodeficiency virus type I enhancer binding protein 1	0.012
CH25H	cholesterol 25-hydroxylase	0.012
SOX11	SRY (sex determining region Y)-box 11	0.012
IRF4	interferon regulatory factor 4	0.012
HLA-A	major histocompatibility complex, class I, A	0.012
BMI1	BMI1 polycomb ring finger oncogene	0.012
TRIM6-TRIM34	TRIM6-TRIM34 readthrough	0.012
IFI44L	interferon-induced protein 44-like	0.012
AR	androgen receptor	0.012
NFKBIA	nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha	0.012
SIGLEC1	sialic acid binding Ig-like lectin 1, sialoadhesin	0.012
MR1	major histocompatibility complex, class I-related	0.012
OAS3	2'-5'-oligoadenylate synthetase 3, 100kDa	0.012
TUBGCP4	tubulin, gamma complex associated protein 4	0.012
LIF	leukemia inhibitory factor (cholinergic differentiation factor)	0.012
JDP2	Jun dimerization protein 2	0.011
HLA-F	major histocompatibility complex, class I, F	0.011
IDE	insulin-degrading enzyme	0.011
CREBZF	CREB/ATF bZIP transcription factor	0.011
PPARA	peroxisome proliferator-activated receptor alpha	0.011
UTY	ubiquitously transcribed tetratricopeptide repeat gene, Y-linked	0.011
SP140L	SP140 nuclear body protein-like	0.011	Human
PARP4	poly (ADP-ribose) polymerase family, member 4	0.011
HDAC5	histone deacetylase 5	0.011
SUZ12	suppressor of zeste 12 homolog (Drosophila)	0.011
IL1RN	interleukin 1 receptor antagonist	0.011
RNF126	ring finger protein 126	0.011
CXCR6	chemokine (C-X-C motif) receptor 6	0.011
CCR3	chemokine (C-C motif) receptor 3	0.011
ZFYVE9	zinc finger, FYVE domain containing 9	0.011
CCL19	chemokine (C-C motif) ligand 19	0.011	Human
TRIM4	tripartite motif containing 4	0.011	Human
BCOR	BCL6 corepressor	0.011
DARC	Duffy blood group, chemokine receptor	0.011
SIAH1	seven in absentia homolog 1 (Drosophila)	0.011
PRKCA	protein kinase C, alpha	0.011
DZIP3	DAZ interacting protein 3, zinc finger	0.011
MAPK9	mitogen-activated protein kinase 9	0.011
PRMT6	protein arginine methyltransferase 6	0.011
PARP9	poly (ADP-ribose) polymerase family, member 9	0.011
CHFR	checkpoint with forkhead and ring finger domains	0.011
GOLGA1	golgin A1	0.011
CTNNBIP1	catenin, beta interacting protein 1	0.011
HOXB7	homeobox B7	0.011
IL12B	interleukin 12B (natural killer cell stimulatory factor 2, cytotoxic lymphocyte maturation factor 2, p40)	0.011
CCL1	chemokine (C-C motif) ligand 1	0.011	Human
ELF3	E74-like factor 3 (ets domain transcription factor, epithelial-specific )	0.011
TMPRSS4	transmembrane protease, serine 4	0.011	Human
DES	desmin	0.011
GET4	golgi to ER traffic protein 4 homolog (S. cerevisiae)	0.010
EMD	emerin	0.010
CNOT4	CCR4-NOT transcription complex, subunit 4	0.010
SMAD7	SMAD family member 7	0.010
PDE9A	phosphodiesterase 9A	0.010
LTA	lymphotoxin alpha (TNF superfamily, member 1)	0.010
MLLT6	myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 6	0.010
RXRA	retinoid X receptor, alpha	0.010
MLL5	myeloid/lymphoid or mixed-lineage leukemia 5 (trithorax homolog, Drosophila)	0.010
MUC4	mucin 4, cell surface associated	0.010
XAF1	XIAP associated factor 1	0.010
RNF181	ring finger protein 181	0.010
ADARB1	adenosine deaminase, RNA-specific, B1	0.010
TRIM55	tripartite motif containing 55	0.010	Human
SMAD9	SMAD family member 9	0.010
RARA	retinoic acid receptor, alpha	0.010
TDRD7	tudor domain containing 7	0.010
TRIM14	tripartite motif containing 14	0.010