IMP

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Homo sapiens

35 genes annotated in human

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rna 3 end processing

GO:0031123

Any process involved in forming the mature 3' end of an RNA molecule.

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Known genes in the process in human Include functional analogs

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Gene Predictions

Click on a gene's description to view its network relationships with genes known to be involved in "rna 3 end processing"

Show only novel predictions Show only unknown genes Highlight genes with functional analogs involved in "rna 3 end processing" (in gray)

Name	Description	Probability	Func Analog Organism
PABPC1	poly(A) binding protein, cytoplasmic 1	1.000	Yeast Mouse
EXOSC3	exosome component 3	0.999	Yeast
LEO1	Leo1, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)	0.990
TOB1	transducer of ERBB2, 1	0.989
TNRC6A	trinucleotide repeat containing 6A	0.988	Human
CPSF2	cleavage and polyadenylation specific factor 2, 100kDa	0.979
WWOX	WW domain containing oxidoreductase	0.969
CTR9	Ctr9, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)	0.935	Yeast
EXOSC4	exosome component 4	0.931	Yeast
CNOT8	CCR4-NOT transcription complex, subunit 8	0.921	Human Fly
HNRNPD	heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa)	0.919
RTF1	Rtf1, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)	0.911
CNOT7	CCR4-NOT transcription complex, subunit 7	0.816
THOC4	THO complex 4	0.815
DIS3L	DIS3 mitotic control homolog (S. cerevisiae)-like	0.806
PAN3	PAN3 poly(A) specific ribonuclease subunit homolog (S. cerevisiae)	0.802	Yeast
EXOSC7	exosome component 7	0.795	Yeast
EXOSC9	exosome component 9	0.758	Yeast
EXOSC2	exosome component 2	0.724	Yeast
ZNF202	zinc finger protein 202	0.660
CNOT1	CCR4-NOT transcription complex, subunit 1	0.635
BTG1	B-cell translocation gene 1, anti-proliferative	0.631	Human
EIF2C1	eukaryotic translation initiation factor 2C, 1	0.613
NUDT21	nudix (nucleoside diphosphate linked moiety X)-type motif 21	0.574
CNOT6	CCR4-NOT transcription complex, subunit 6	0.544	Yeast Fly
CCNH	cyclin H	0.533
BTG2	BTG family, member 2	0.517
TNRC6B	trinucleotide repeat containing 6B	0.516
YBX1	Y box binding protein 1	0.494	Zebrafish
MED10	mediator complex subunit 10	0.466
NOXA1	NADPH oxidase activator 1	0.452
CNOT3	CCR4-NOT transcription complex, subunit 3	0.432	Yeast
CNOT2	CCR4-NOT transcription complex, subunit 2	0.426
DICER1	dicer 1, ribonuclease type III	0.377
MED6	mediator complex subunit 6	0.370
CDK8	cyclin-dependent kinase 8	0.356	Fly
EXOSC10	exosome component 10	0.315	Yeast
CNOT6L	CCR4-NOT transcription complex, subunit 6-like	0.282	Yeast
CPSF3	cleavage and polyadenylation specific factor 3, 73kDa	0.278
CPSF1	cleavage and polyadenylation specific factor 1, 160kDa	0.226
EXOSC1	exosome component 1	0.224	Yeast
TCEA1	transcription elongation factor A (SII), 1	0.192	Yeast
SARNP	SAP domain containing ribonucleoprotein	0.183
CSTF2	cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa	0.168
CPEB4	cytoplasmic polyadenylation element binding protein 4	0.151	Human
SYMPK	symplekin	0.150
PAF1	Paf1, RNA polymerase II associated factor, homolog (S. cerevisiae)	0.149
PAIP2	poly(A) binding protein interacting protein 2	0.145
POLR2A	polymerase (RNA) II (DNA directed) polypeptide A, 220kDa	0.134
RAD21	RAD21 homolog (S. pombe)	0.124
EXOSC8	exosome component 8	0.117
PRRC2A	proline-rich coiled-coil 2A	0.117
IER2	immediate early response 2	0.115
EXOSC5	exosome component 5	0.114	Yeast
MNAT1	menage a trois homolog 1, cyclin H assembly factor (Xenopus laevis)	0.106
MED29	mediator complex subunit 29	0.100
HNRNPC	heterogeneous nuclear ribonucleoprotein C (C1/C2)	0.100	Yeast
CPSF6	cleavage and polyadenylation specific factor 6, 68kDa	0.096
CXXC1	CXXC finger protein 1	0.092
EIF2C4	eukaryotic translation initiation factor 2C, 4	0.091
KHDRBS1	KH domain containing, RNA binding, signal transduction associated 1	0.089
XRN2	5'-3' exoribonuclease 2	0.088
DIS3	DIS3 mitotic control homolog (S. cerevisiae)	0.087
DUSP1	dual specificity phosphatase 1	0.078
EIF2AK2	eukaryotic translation initiation factor 2-alpha kinase 2	0.077
MED13	mediator complex subunit 13	0.077
GSPT1	G1 to S phase transition 1	0.077
MED17	mediator complex subunit 17	0.070
HSF1	heat shock transcription factor 1	0.067
NUP98	nucleoporin 98kDa	0.065
CNOT10	CCR4-NOT transcription complex, subunit 10	0.065
WDR61	WD repeat domain 61	0.064
CLK2	CDC-like kinase 2	0.062
SNRNP70	small nuclear ribonucleoprotein 70kDa (U1)	0.061
DDX39B	DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B	0.061	Yeast
MED28	mediator complex subunit 28	0.061
CDC73	cell division cycle 73, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)	0.057
TRIM71	tripartite motif containing 71	0.056
FOS	FBJ murine osteosarcoma viral oncogene homolog	0.056
SNW1	SNW domain containing 1	0.055
PARD6A	par-6 partitioning defective 6 homolog alpha (C. elegans)	0.055
STAG2	stromal antigen 2	0.053
NPM1	nucleophosmin (nucleolar phosphoprotein B23, numatrin)	0.052
JUNB	jun B proto-oncogene	0.052
AFF4	AF4/FMR2 family, member 4	0.051
TBK1	TANK-binding kinase 1	0.047
BCL10	B-cell CLL/lymphoma 10	0.046
CEBPD	CCAAT/enhancer binding protein (C/EBP), delta	0.044
POLR2J	polymerase (RNA) II (DNA directed) polypeptide J, 13.3kDa	0.044
PMS2	PMS2 postmeiotic segregation increased 2 (S. cerevisiae)	0.042
FAM118B	family with sequence similarity 118, member B	0.042
ILF2	interleukin enhancer binding factor 2, 45kDa	0.042
MSH2	mutS homolog 2, colon cancer, nonpolyposis type 1 (E. coli)	0.041
TRIM41	tripartite motif containing 41	0.041
STRN4	striatin, calmodulin binding protein 4	0.041
MED23	mediator complex subunit 23	0.040
PCBP2	poly(rC) binding protein 2	0.040
METTL17	methyltransferase like 17	0.039
SBF1	SET binding factor 1	0.038
U2AF1	U2 small nuclear RNA auxiliary factor 1	0.038
C7orf64	chromosome 7 open reading frame 64	0.038
MARK3	MAP/microtubule affinity-regulating kinase 3	0.037
POLR2B	polymerase (RNA) II (DNA directed) polypeptide B, 140kDa	0.037
PARD3	par-3 partitioning defective 3 homolog (C. elegans)	0.037
TGFBR2	transforming growth factor, beta receptor II (70/80kDa)	0.037
PRKCZ	protein kinase C, zeta	0.037	Yeast
MAPKAPK2	mitogen-activated protein kinase-activated protein kinase 2	0.036
SRPK2	SRSF protein kinase 2	0.036
PTBP1	polypyrimidine tract binding protein 1	0.036
MED30	mediator complex subunit 30	0.036
LYAR	Ly1 antibody reactive homolog (mouse)	0.035
PCBP1	poly(rC) binding protein 1	0.035
MED14	mediator complex subunit 14	0.035
UBE2S	ubiquitin-conjugating enzyme E2S	0.034
THOC2	THO complex 2	0.034
C5orf41	chromosome 5 open reading frame 41	0.033
PARD6B	par-6 partitioning defective 6 homolog beta (C. elegans)	0.033
SH3RF1	SH3 domain containing ring finger 1	0.032
AEBP2	AE binding protein 2	0.032
MLL	myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila)	0.031
DEK	DEK oncogene	0.031
CCNC	cyclin C	0.031	Fly
NUP155	nucleoporin 155kDa	0.030
SMG1	SMG1 homolog, phosphatidylinositol 3-kinase-related kinase (C. elegans)	0.030
NXT1	NTF2-like export factor 1	0.030
MED26	mediator complex subunit 26	0.030
PNRC1	proline-rich nuclear receptor coactivator 1	0.030
ZFP36	zinc finger protein 36, C3H type, homolog (mouse)	0.030
ATXN2	ataxin 2	0.029
EIF2S1	eukaryotic translation initiation factor 2, subunit 1 alpha, 35kDa	0.029
INTS1	integrator complex subunit 1	0.029
CSTF1	cleavage stimulation factor, 3' pre-RNA, subunit 1, 50kDa	0.029
UPF1	UPF1 regulator of nonsense transcripts homolog (yeast)	0.029
EEF1A1	eukaryotic translation elongation factor 1 alpha 1	0.029
SUPT5H	suppressor of Ty 5 homolog (S. cerevisiae)	0.029
PTGES3	prostaglandin E synthase 3 (cytosolic)	0.028
UBR5	ubiquitin protein ligase E3 component n-recognin 5	0.028
CIZ1	CDKN1A interacting zinc finger protein 1	0.028
RICTOR	RPTOR independent companion of MTOR, complex 2	0.028
APBB1	amyloid beta (A4) precursor protein-binding, family B, member 1 (Fe65)	0.028
TSC22D1	TSC22 domain family, member 1	0.027
NFAT5	nuclear factor of activated T-cells 5, tonicity-responsive	0.027
PAPOLA	poly(A) polymerase alpha	0.027	Human Mouse
NR4A2	nuclear receptor subfamily 4, group A, member 2	0.026
ZMAT3	zinc finger, matrin-type 3	0.026
TNRC6C	trinucleotide repeat containing 6C	0.026
STK4	serine/threonine kinase 4	0.026
EIF2C3	eukaryotic translation initiation factor 2C, 3	0.026
IPO7	importin 7	0.026
SERBP1	SERPINE1 mRNA binding protein 1	0.025
UCKL1	uridine-cytidine kinase 1-like 1	0.025
EIF4G3	eukaryotic translation initiation factor 4 gamma, 3	0.025
CAND1	cullin-associated and neddylation-dissociated 1	0.025
MED20	mediator complex subunit 20	0.025
CTCF	CCCTC-binding factor (zinc finger protein)	0.025
CHTOP	chromatin target of PRMT1	0.025
MED12	mediator complex subunit 12	0.025
NOP56	NOP56 ribonucleoprotein homolog (yeast)	0.024
NCBP1	nuclear cap binding protein subunit 1, 80kDa	0.024
CCL14	chemokine (C-C motif) ligand 14	0.024
CENPT	centromere protein T	0.024
KPNB1	karyopherin (importin) beta 1	0.024
TARDBP	TAR DNA binding protein	0.023
PABPN1	poly(A) binding protein, nuclear 1	0.023	Fly
MPHOSPH6	M-phase phosphoprotein 6	0.023
CARD11	caspase recruitment domain family, member 11	0.023
PUF60	poly-U binding splicing factor 60KDa	0.022
WWP1	WW domain containing E3 ubiquitin protein ligase 1	0.022
MFN1	mitofusin 1	0.022
RAE1	RAE1 RNA export 1 homolog (S. pombe)	0.022
MED16	mediator complex subunit 16	0.022
NUMB	numb homolog (Drosophila)	0.022
MED13L	mediator complex subunit 13-like	0.022
MED18	mediator complex subunit 18	0.022
THOC5	THO complex 5	0.022
MAPK14	mitogen-activated protein kinase 14	0.021
KHSRP	KH-type splicing regulatory protein	0.021
YWHAH	tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, eta polypeptide	0.021
EIF4A3	eukaryotic translation initiation factor 4A3	0.021
BAZ1A	bromodomain adjacent to zinc finger domain, 1A	0.021
FBXO33	F-box protein 33	0.020
CCDC115	coiled-coil domain containing 115	0.020
WAPAL	wings apart-like homolog (Drosophila)	0.020
SLBP	stem-loop binding protein	0.020	Mouse Fly
ILF3	interleukin enhancer binding factor 3, 90kDa	0.020
CELF1	CUGBP, Elav-like family member 1	0.020
CUX1	cut-like homeobox 1	0.020
EIF4B	eukaryotic translation initiation factor 4B	0.020
REL	v-rel reticuloendotheliosis viral oncogene homolog (avian)	0.020
NFKBIZ	nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta	0.020
ACIN1	apoptotic chromatin condensation inducer 1	0.020
PTK2B	PTK2B protein tyrosine kinase 2 beta	0.020
STAU1	staufen, RNA binding protein, homolog 1 (Drosophila)	0.019
PAIP1	poly(A) binding protein interacting protein 1	0.019
PICK1	protein interacting with PRKCA 1	0.019
C1orf93	chromosome 1 open reading frame 93	0.019
TOB2	transducer of ERBB2, 2	0.018
PDS5A	PDS5, regulator of cohesion maintenance, homolog A (S. cerevisiae)	0.018
CDCP1	CUB domain containing protein 1	0.018
MFAP1	microfibrillar-associated protein 1	0.018
POP5	processing of precursor 5, ribonuclease P/MRP subunit (S. cerevisiae)	0.017
CPSF4	cleavage and polyadenylation specific factor 4, 30kDa	0.017
CCT2	chaperonin containing TCP1, subunit 2 (beta)	0.017
KLF4	Kruppel-like factor 4 (gut)	0.017
GLIS2	GLIS family zinc finger 2	0.017
MAD2L2	MAD2 mitotic arrest deficient-like 2 (yeast)	0.017
PUM1	pumilio homolog 1 (Drosophila)	0.017
CABIN1	calcineurin binding protein 1	0.017
C19orf2	chromosome 19 open reading frame 2	0.016
PARD6G	par-6 partitioning defective 6 homolog gamma (C. elegans)	0.016
NUP107	nucleoporin 107kDa	0.016
SSB	Sjogren syndrome antigen B (autoantigen La)	0.016
TRMT1	TRM1 tRNA methyltransferase 1 homolog (S. cerevisiae)	0.016
HNRNPA1	heterogeneous nuclear ribonucleoprotein A1	0.016
CKAP5	cytoskeleton associated protein 5	0.016
WBP11	WW domain binding protein 11	0.016
UTP3	UTP3, small subunit (SSU) processome component, homolog (S. cerevisiae)	0.016
MYST3	MYST histone acetyltransferase (monocytic leukemia) 3	0.016
THOC1	THO complex 1	0.016
JUND	jun D proto-oncogene	0.016
HSPH1	heat shock 105kDa/110kDa protein 1	0.016
SPATA5L1	spermatogenesis associated 5-like 1	0.016
MED1	mediator complex subunit 1	0.016
CPEB3	cytoplasmic polyadenylation element binding protein 3	0.015
HNRNPK	heterogeneous nuclear ribonucleoprotein K	0.015
MLL3	myeloid/lymphoid or mixed-lineage leukemia 3	0.015
ZNF71	zinc finger protein 71	0.015
ZNF692	zinc finger protein 692	0.015
NUP153	nucleoporin 153kDa	0.015
RBM6	RNA binding motif protein 6	0.015
DCAF15	DDB1 and CUL4 associated factor 15	0.015
EIF3CL	eukaryotic translation initiation factor 3, subunit C-like	0.015
MAGED2	melanoma antigen family D, 2	0.015
PAN2	PAN2 poly(A) specific ribonuclease subunit homolog (S. cerevisiae)	0.015	Yeast Fly
TAB1	TGF-beta activated kinase 1/MAP3K7 binding protein 1	0.015
KARS	lysyl-tRNA synthetase	0.015
G3BP1	GTPase activating protein (SH3 domain) binding protein 1	0.015
ZC3HC1	zinc finger, C3HC-type containing 1	0.015
TRIM9	tripartite motif containing 9	0.015
LMO3	LIM domain only 3 (rhombotin-like 2)	0.015
CTNNBL1	catenin, beta like 1	0.015
KIF2A	kinesin heavy chain member 2A	0.014
CDK5RAP3	CDK5 regulatory subunit associated protein 3	0.014
CDK10	cyclin-dependent kinase 10	0.014
GADD45B	growth arrest and DNA-damage-inducible, beta	0.014
UBAP2L	ubiquitin associated protein 2-like	0.014
MED21	mediator complex subunit 21	0.014
CBWD2	COBW domain containing 2	0.014
EPRS	glutamyl-prolyl-tRNA synthetase	0.014
RPE	ribulose-5-phosphate-3-epimerase	0.014
DDX21	DEAD (Asp-Glu-Ala-Asp) box polypeptide 21	0.014
SKIV2L2	superkiller viralicidic activity 2-like 2 (S. cerevisiae)	0.014	Yeast
AKT1	v-akt murine thymoma viral oncogene homolog 1	0.014	Yeast
PUS7L	pseudouridylate synthase 7 homolog (S. cerevisiae)-like	0.014
MAP2K6	mitogen-activated protein kinase kinase 6	0.014
ASXL1	additional sex combs like 1 (Drosophila)	0.013
BACE1	beta-site APP-cleaving enzyme 1	0.013
PPP2R5E	protein phosphatase 2, regulatory subunit B', epsilon isoform	0.013
POLR1C	polymerase (RNA) I polypeptide C, 30kDa	0.013
MED19	mediator complex subunit 19	0.013
PRKCB	protein kinase C, beta	0.013
UBE2K	ubiquitin-conjugating enzyme E2K (UBC1 homolog, yeast)	0.013
MED7	mediator complex subunit 7	0.013
CSRNP1	cysteine-serine-rich nuclear protein 1	0.013
RARS	arginyl-tRNA synthetase	0.013
POLR2D	polymerase (RNA) II (DNA directed) polypeptide D	0.013
RQCD1	RCD1 required for cell differentiation1 homolog (S. pombe)	0.013
CSNK1G2	casein kinase 1, gamma 2	0.013
YTHDF2	YTH domain family, member 2	0.013
STK25	serine/threonine kinase 25	0.013
APBA1	amyloid beta (A4) precursor protein-binding, family A, member 1	0.013
FAM126B	family with sequence similarity 126, member B	0.013
ERI1	exoribonuclease 1	0.012	Mouse
CDK5RAP1	CDK5 regulatory subunit associated protein 1	0.012
RPRD2	regulation of nuclear pre-mRNA domain containing 2	0.012
RBM8A	RNA binding motif protein 8A	0.012
KLHL24	kelch-like 24 (Drosophila)	0.012
CDC25B	cell division cycle 25 homolog B (S. pombe)	0.012
PIH1D1	PIH1 domain containing 1	0.012
ERBB4	v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)	0.012
FNIP1	folliculin interacting protein 1	0.012
RARA	retinoic acid receptor, alpha	0.012
GSPT2	G1 to S phase transition 2	0.012
TNPO1	transportin 1	0.012
SPG7	spastic paraplegia 7 (pure and complicated autosomal recessive)	0.012
PINX1	PIN2/TERF1 interacting, telomerase inhibitor 1	0.012
NOP58	NOP58 ribonucleoprotein homolog (yeast)	0.011
ASH2L	ash2 (absent, small, or homeotic)-like (Drosophila)	0.011
EIF2C2	eukaryotic translation initiation factor 2C, 2	0.011	Mouse
PAFAH1B2	platelet-activating factor acetylhydrolase 1b, catalytic subunit 2 (30kDa)	0.011
SHC1	SHC (Src homology 2 domain containing) transforming protein 1	0.011
FAM190B	family with sequence similarity 190, member B	0.011
CPSF7	cleavage and polyadenylation specific factor 7, 59kDa	0.011	Human
PPP1R8	protein phosphatase 1, regulatory (inhibitor) subunit 8	0.011
PTMA	prothymosin, alpha	0.011
AHSA2	AHA1, activator of heat shock 90kDa protein ATPase homolog 2 (yeast)	0.011
CASP3	caspase 3, apoptosis-related cysteine peptidase	0.011
MAGEA11	melanoma antigen family A, 11	0.011
CEP76	centrosomal protein 76kDa	0.011
DPCD	deleted in primary ciliary dyskinesia homolog (mouse)	0.011
BTBD7	BTB (POZ) domain containing 7	0.011
RBBP5	retinoblastoma binding protein 5	0.011
TNFRSF21	tumor necrosis factor receptor superfamily, member 21	0.011
SFSWAP	splicing factor, suppressor of white-apricot homolog (Drosophila)	0.011
IPO8	importin 8	0.011
BLMH	bleomycin hydrolase	0.011
DBF4	DBF4 homolog (S. cerevisiae)	0.011
WDR75	WD repeat domain 75	0.011
MCM7	minichromosome maintenance complex component 7	0.011
PANK3	pantothenate kinase 3	0.010
EIF3I	eukaryotic translation initiation factor 3, subunit I	0.010
NUP35	nucleoporin 35kDa	0.010
CKS2	CDC28 protein kinase regulatory subunit 2	0.010
UPF2	UPF2 regulator of nonsense transcripts homolog (yeast)	0.010
RPS6KB1	ribosomal protein S6 kinase, 70kDa, polypeptide 1	0.010
TP73	tumor protein p73	0.010
EEF1D	eukaryotic translation elongation factor 1 delta (guanine nucleotide exchange protein)	0.010
FYN	FYN oncogene related to SRC, FGR, YES	0.010