Process View
The network for 't cell differentiation in thymus' in your query organism is displayed on the left, if relationships are supported by the integrated data. Moving any of the genes in that network will simultaneously update the homologs in the networks displayed to the right (if they exist). Additionally, hovering over any nodes will highlight the identified functionally similar homologs in the other networks. Last, the bar above the networks allows you to remove/add additional organisms. Simily drag and drop the organism names in the desired order.
The process in which a precursor cell type acquires the specialized features of a T cell via a differentiation pathway dependent upon transit through the thymus.
Name | Description | Probability | Func Analog Organism |
---|---|---|---|
Ikzf1 | IKAROS family zinc finger 1 | 1.000 | |
Lat | linker for activation of T cells | 0.999 | |
Fas | Fas (TNF receptor superfamily member 6) | 0.999 | |
Nfkb2 | nuclear factor of kappa light polypeptide gene enhancer in B-cells 2, p49/p100 | 0.994 | |
Fyn | Fyn proto-oncogene | 0.993 | |
Lck | lymphocyte protein tyrosine kinase | 0.990 | |
Trp53 | transformation related protein 53 | 0.990 | |
Gli3 | GLI-Kruppel family member GLI3 | 0.987 | |
Bcl2l11 | BCL2-like 11 (apoptosis facilitator) | 0.982 | |
Tcra | T-cell receptor alpha chain | 0.979 | |
Rybp | RING1 and YY1 binding protein | 0.977 | |
Gli2 | GLI-Kruppel family member GLI2 | 0.975 | |
Foxp3 | forkhead box P3 | 0.973 | |
Foxn1 | forkhead box N1 | 0.969 | |
Cd247 | CD247 antigen | 0.968 | |
Rag2 | recombination activating gene 2 | 0.968 | |
Map3k14 | mitogen-activated protein kinase kinase kinase 14 | 0.968 | |
Il2rg | interleukin 2 receptor, gamma chain | 0.943 | |
Zfp36 | zinc finger protein 36 | 0.939 | |
Gata4 | GATA binding protein 4 | 0.930 | |
Ptprc | protein tyrosine phosphatase, receptor type, C | 0.922 | |
Runx1 | runt related transcription factor 1 | 0.913 | |
Adam19 | a disintegrin and metallopeptidase domain 19 (meltrin beta) | 0.907 | |
Il2 | interleukin 2 | 0.905 | |
Fgf10 | fibroblast growth factor 10 | 0.899 | |
Ntf3 | neurotrophin 3 | 0.894 | |
Bcl2 | B-cell leukemia/lymphoma 2 | 0.874 | |
Cd44 | CD44 antigen | 0.872 | |
Socs1 | suppressor of cytokine signaling 1 | 0.870 | |
Fgfr2 | fibroblast growth factor receptor 2 | 0.864 | |
Tgfb2 | transforming growth factor, beta 2 | 0.845 | |
Grb2 | growth factor receptor bound protein 2 | 0.834 | |
Igh | immunoglobulin heavy chain complex | 0.828 | |
Fos | FBJ osteosarcoma oncogene | 0.806 | |
Cd19 | CD19 antigen | 0.798 | |
Pax2 | paired box gene 2 | 0.782 | |
Tnf | tumor necrosis factor | 0.779 | |
Ctnnb1 | catenin (cadherin associated protein), beta 1 | 0.774 | |
Tnfaip3 | tumor necrosis factor, alpha-induced protein 3 | 0.773 | |
Smad3 | MAD homolog 3 (Drosophila) | 0.766 | |
Ltb | lymphotoxin B | 0.752 | |
Ret | ret proto-oncogene | 0.747 | |
Efnb2 | ephrin B2 | 0.739 | |
H2-Ab1 | histocompatibility 2, class II antigen A, beta 1 | 0.718 | |
Irf5 | interferon regulatory factor 5 | 0.683 | |
Fzd8 | frizzled homolog 8 (Drosophila) | 0.673 | |
Erbb2 | v-erb-b2 erythroblastic leukemia viral oncogene homolog 2, neuro/glioblastoma derived oncogene homolog (avian) | 0.667 | |
Ptgs2 | prostaglandin-endoperoxide synthase 2 | 0.666 | |
Trp63 | transformation related protein 63 | 0.662 | |
Ptpn11 | protein tyrosine phosphatase, non-receptor type 11 | 0.655 | |
Rarg | retinoic acid receptor, gamma | 0.650 | |
Smad4 | MAD homolog 4 (Drosophila) | 0.650 | |
Itk | IL2-inducible T-cell kinase | 0.642 | |
Efna1 | ephrin A1 | 0.632 | |
Cd79a | CD79A antigen (immunoglobulin-associated alpha) | 0.627 | |
Jun | Jun oncogene | 0.621 | |
Ccr6 | chemokine (C-C motif) receptor 6 | 0.613 | |
Mcl1 | myeloid cell leukemia sequence 1 | 0.611 | |
Stat3 | signal transducer and activator of transcription 3 | 0.595 | |
Gdnf | glial cell line derived neurotrophic factor | 0.594 | |
Bax | BCL2-associated X protein | 0.583 | |
Zap70 | zeta-chain (TCR) associated protein kinase | 0.582 | |
Lta | lymphotoxin A | 0.580 | |
Fzd1 | frizzled homolog 1 (Drosophila) | 0.579 | |
Notch1 | Notch gene homolog 1 (Drosophila) | 0.570 | |
Tcrd | T-cell receptor delta chain | 0.570 | |
Casp8 | caspase 8 | 0.557 | |
Pten | phosphatase and tensin homolog | 0.543 | |
Ifng | interferon gamma | 0.534 | |
Il6st | interleukin 6 signal transducer | 0.531 | |
Hr | hairless | 0.524 | |
Cd3e | CD3 antigen, epsilon polypeptide | 0.518 | |
Ptpn22 | protein tyrosine phosphatase, non-receptor type 22 (lymphoid) | 0.505 | |
Rara | retinoic acid receptor, alpha | 0.503 | |
H2-Eb1 | histocompatibility 2, class II antigen E beta | 0.501 | |
Junb | Jun-B oncogene | 0.500 | |
H2-K1 | histocompatibility 2, K1, K region | 0.490 | |
Lhx1 | LIM homeobox protein 1 | 0.488 | |
Il27ra | interleukin 27 receptor, alpha | 0.486 | |
Hes1 | hairy and enhancer of split 1 (Drosophila) | 0.479 | |
Cd96 | CD96 antigen | 0.475 | |
Cd4 | CD4 antigen | 0.463 | |
Rnf2 | ring finger protein 2 | 0.462 | |
Ccnd1 | cyclin D1 | 0.452 | |
Atxn1 | ataxin 1 | 0.442 | |
Foxf1a | forkhead box F1a | 0.441 | |
Vav1 | vav 1 oncogene | 0.434 | |
Rxra | retinoid X receptor alpha | 0.431 | |
Nfkb1 | nuclear factor of kappa light polypeptide gene enhancer in B-cells 1, p105 | 0.422 | |
Cd3g | CD3 antigen, gamma polypeptide | 0.421 | |
Ace | angiotensin I converting enzyme (peptidyl-dipeptidase A) 1 | 0.414 | |
Rag1 | recombination activating gene 1 | 0.410 | |
Tcrb | T-cell receptor beta chain | 0.408 | |
Stat1 | signal transducer and activator of transcription 1 | 0.405 | |
Ccnd2 | cyclin D2 | 0.398 | |
Ptpn14 | protein tyrosine phosphatase, non-receptor type 14 | 0.397 | |
Id2 | inhibitor of DNA binding 2 | 0.390 | |
Prkcd | protein kinase C, delta | 0.387 | |
Mdm2 | transformed mouse 3T3 cell double minute 2 | 0.384 | |
Hic1 | hypermethylated in cancer 1 | 0.373 |
Name | Description | Probability | Func Analog Organism |
---|---|---|---|
rag1 | recombination activating gene 1 | 0.945 | |
il7r | interleukin 7 receptor | 0.477 | |
lrrc33 | leucine rich repeat containing 33 | 0.366 | |
lft1 | lefty1 | 0.334 | |
dntt | deoxynucleotidyltransferase, terminal | 0.311 | |
ikzf1 | IKAROS family zinc finger 1 (Ikaros) | 0.230 | |
dld | deltaD | 0.176 | |
cdh2 | cadherin 2, neuronal | 0.160 | |
ptger4a | prostaglandin E receptor 4 (subtype EP4) a | 0.147 | |
rpl7a | ribosomal protein L7a | 0.089 | |
zgc:64115 | zgc:64115 | 0.087 | |
hoxd4a | homeo box D4a | 0.083 | |
chd | chordin | 0.076 | |
cdx4 | caudal type homeo box transcription factor 4 | 0.074 | |
boc | brother of CDO | 0.071 | |
dbx1a | developing brain homeobox 1a | 0.066 | |
rspo3 | R-spondin 3 homolog (Xenopus laevis) | 0.064 | |
pdcd2 | programmed cell death 2 | 0.062 | |
abcg2a | ATP-binding cassette, sub-family G (WHITE), member 2a | 0.059 | |
LOC100151531 | zinc finger protein Gfi-1b-like | 0.058 | |
tshz1 | teashirt family zinc finger 1 | 0.054 | |
jak1 | Janus kinase 1 | 0.050 | |
bmp2a | bone morphogenetic protein 2a | 0.050 | |
cxcr3.2 | chemokine (C-X-C motif) receptor 3.2 | 0.050 | |
rag2 | recombination activating gene 2 | 0.050 | |
fgfr1b | fibroblast growth factor receptor 1b | 0.047 | |
foxd3 | forkhead box D3 | 0.046 | |
ptger2a | prostaglandin E receptor 2a (subtype EP2) | 0.045 | |
cpne1 | copine I | 0.041 | |
tsc22d3 | TSC22 domain family, member 3 | 0.040 | |
coro1a | coronin, actin binding protein, 1A | 0.039 | |
si:dkey-27i16.2 | si:dkey-27i16.2 | 0.038 | |
foxa2 | forkhead box A2 | 0.037 | |
ighm | immunoglobulin heavy constant mu and immunoglobulin heavy constant mu | 0.036 | |
erbb3b | v-erb-b2 erythroblastic leukemia viral oncogene homolog 3b | 0.035 | |
rpl23a | ribosomal protein L23a | 0.035 | |
znf703 | zinc finger protein 703 | 0.034 | |
ef1a | elongation factor 1-alpha | 0.034 | |
lft2 | lefty2 | 0.032 | |
rnf128a | ring finger protein 128a | 0.030 | |
spry2 | sprouty homolog 2 | 0.030 | |
plod1a | procollagen-lysine 1, 2-oxoglutarate 5-dioxygenase 1a | 0.030 | |
cxcr4b | chemokine (C-X-C motif), receptor 4b | 0.028 | |
ccnd1 | cyclin D1 | 0.028 | |
cyp26c1 | cytochrome P450, family 26, subfamily C, polypeptide 1 | 0.028 | |
amotl2a | angiomotin like 2a | 0.028 | |
npm4 | nucleophosmin/nucleoplasmin, 4 | 0.028 | |
her3 | hairy-related 3 | 0.027 | |
ighz | immunoglobulin heavy constant zeta | 0.027 | |
mst1rb | macrophage stimulating 1 receptor (c-met-related tyrosine kinase), b | 0.026 | |
scd | stearoyl-CoA desaturase (delta-9-desaturase) | 0.025 | |
fzd7a | frizzled homolog 7a | 0.025 | |
cmyb | transcription factor cmyb | 0.024 | |
bcl2 | B-cell leukemia/lymphoma 2 | 0.024 | |
notch3 | notch homolog 3 | 0.023 | |
jag2 | jagged 2 | 0.023 | |
fas | Fas (TNF receptor superfamily, member 6) | 0.022 | |
hnf1bb | HNF1 homeobox Bb | 0.022 | |
otx1b | orthodenticle homolog 1b | 0.022 | |
cdkn1a | cyclin-dependent kinase inhibitor 1A | 0.021 | |
jak3 | Janus kinase 3 (a protein tyrosine kinase, leukocyte) | 0.021 | |
pkd2 | polycystic kidney disease 2 | 0.020 | |
itga2b | integrin, alpha 2b (platelet glycoprotein IIb of IIb/IIIa complex, antigen CD41B) | 0.017 | |
sox2 | SRY-box containing gene 2 | 0.017 | |
tcf7 | transcription factor 7 (T-cell specific, HMG-box) | 0.017 | |
maff | v-maf musculoaponeurotic fibrosarcoma oncogene homolog f (avian) | 0.016 | |
her6 | hairy-related 6 | 0.016 | |
ephb4b | eph receptor B4b | 0.016 | |
lcp1 | lymphocyte cytosolic plastin 1 | 0.016 | |
fgf3 | fibroblast growth factor 3 | 0.015 | |
lycat | lysocardiolipin acyltransferase | 0.015 | |
fzd5 | frizzled homolog 5 | 0.015 | |
npy8ar | neuropeptide Y receptor Y8a | 0.015 | |
gbx2 | gastrulation brain homeo box 2 | 0.015 | |
wnt8b | wingless-type MMTV integration site family, member 8b | 0.015 | |
crabp2b | cellular retinoic acid binding protein 2, b | 0.014 | |
runx3 | runt-related transcription factor 3 | 0.014 | |
myb | myeloblastosis oncogene | 0.014 | |
zgc:92868 | zgc:92868 | 0.014 | |
st14a | suppression of tumorigenicity 14 (colon carcinoma) a | 0.013 | |
tbp | TATA box binding protein | 0.013 | |
ptk6a | PTK6 protein tyrosine kinase 6a | 0.013 | |
irf8 | interferon regulatory factor 8 | 0.013 | |
fgfr4 | fibroblast growth factor receptor 4 | 0.012 | |
ankrd6 | ankyrin repeat domain 6 | 0.012 | |
LOC566708 | FL cytokine receptor-like | 0.012 | |
cdc14b | CDC14 cell division cycle 14 homolog B | 0.011 | |
ddx46 | DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 | 0.011 | |
ripk2 | receptor-interacting serine-threonine kinase 2 | 0.011 | |
mc1r | melanocortin 1 receptor | 0.011 | |
mc2r | melanocortin 2 receptor | 0.011 | |
wasb | Wiskott-Aldrich syndrome (eczema-thrombocytopenia) b | 0.011 | |
dlc | deltaC | 0.011 | |
gata1a | GATA binding protein 1a | 0.011 | |
gfi1.1 | growth factor independent 1.1 | 0.011 | |
abcg2c | ATP-binding cassette, sub-family G (WHITE), member 2c | 0.011 |
Name | Description | Probability | Func Analog Organism |
---|---|---|---|
LAT | linker for activation of T cells | 0.988 | |
CASP8 | caspase 8, apoptosis-related cysteine peptidase | 0.971 | |
NOTCH3 | notch 3 | 0.927 | |
RIPK1 | receptor (TNFRSF)-interacting serine-threonine kinase 1 | 0.721 | |
CD247 | CD247 molecule | 0.689 | |
APLF | aprataxin and PNKP like factor | 0.604 | |
BMPR1A | bone morphogenetic protein receptor, type IA | 0.599 | |
EGFR | epidermal growth factor receptor | 0.578 | |
IL1R1 | interleukin 1 receptor, type I | 0.562 | |
CCND1 | cyclin D1 | 0.455 | |
IL2RB | interleukin 2 receptor, beta | 0.444 | |
CXCR4 | chemokine (C-X-C motif) receptor 4 | 0.442 | |
MPZL3 | myelin protein zero-like 3 | 0.432 | |
RUNX1 | runt-related transcription factor 1 | 0.424 | |
NOTCH1 | notch 1 | 0.411 | |
LCP2 | lymphocyte cytosolic protein 2 (SH2 domain containing leukocyte protein of 76kDa) | 0.409 | |
RB1 | retinoblastoma 1 | 0.403 | |
PIK3R1 | phosphoinositide-3-kinase, regulatory subunit 1 (alpha) | 0.391 | |
CTBP1 | C-terminal binding protein 1 | 0.385 | |
XRCC4 | X-ray repair complementing defective repair in Chinese hamster cells 4 | 0.373 | |
DLG1 | discs, large homolog 1 (Drosophila) | 0.363 | |
TAL1 | T-cell acute lymphocytic leukemia 1 | 0.334 | |
INSR | insulin receptor | 0.322 | |
GHR | growth hormone receptor | 0.314 | |
LCK | lymphocyte-specific protein tyrosine kinase | 0.312 | |
SUV39H1 | suppressor of variegation 3-9 homolog 1 (Drosophila) | 0.304 | |
ERBB3 | v-erb-b2 erythroblastic leukemia viral oncogene homolog 3 (avian) | 0.288 | |
PTPN1 | protein tyrosine phosphatase, non-receptor type 1 | 0.286 | |
BCL10 | B-cell CLL/lymphoma 10 | 0.263 | |
IFNAR2 | interferon (alpha, beta and omega) receptor 2 | 0.262 | |
CDK6 | cyclin-dependent kinase 6 | 0.252 | |
HLA-DQA1 | major histocompatibility complex, class II, DQ alpha 1 | 0.243 | |
CCND3 | cyclin D3 | 0.238 | |
MDM2 | Mdm2 p53 binding protein homolog (mouse) | 0.207 | |
IL4R | interleukin 4 receptor | 0.202 | |
IL2RG | interleukin 2 receptor, gamma | 0.200 | |
SYK | spleen tyrosine kinase | 0.195 | |
LIG4 | ligase IV, DNA, ATP-dependent | 0.191 | |
CD2 | CD2 molecule | 0.191 | |
CD3G | CD3g molecule, gamma (CD3-TCR complex) | 0.188 | |
MKL1 | megakaryoblastic leukemia (translocation) 1 | 0.187 | |
NOTCH2 | notch 2 | 0.183 | |
HLA-B | major histocompatibility complex, class I, B | 0.171 | |
ERBB2 | v-erb-b2 erythroblastic leukemia viral oncogene homolog 2, neuro/glioblastoma derived oncogene homolog (avian) | 0.165 | |
STRADA | STE20-related kinase adaptor alpha | 0.164 | |
TNFAIP3 | tumor necrosis factor, alpha-induced protein 3 | 0.162 | |
TP53 | tumor protein p53 | 0.157 | |
EGR1 | early growth response 1 | 0.151 | |
PLCG1 | phospholipase C, gamma 1 | 0.149 | |
HLA-A | major histocompatibility complex, class I, A | 0.149 | |
CDKN2A | cyclin-dependent kinase inhibitor 2A (melanoma, p16, inhibits CDK4) | 0.149 | |
BIRC3 | baculoviral IAP repeat containing 3 | 0.144 | |
CASP10 | caspase 10, apoptosis-related cysteine peptidase | 0.141 | |
STAT3 | signal transducer and activator of transcription 3 (acute-phase response factor) | 0.141 | |
IKZF3 | IKAROS family zinc finger 3 (Aiolos) | 0.130 | |
EGR2 | early growth response 2 | 0.129 | |
FSTL1 | follistatin-like 1 | 0.127 | |
ITGAL | integrin, alpha L (antigen CD11A (p180), lymphocyte function-associated antigen 1; alpha polypeptide) | 0.126 | |
CBL | Cas-Br-M (murine) ecotropic retroviral transforming sequence | 0.126 | |
IL7R | interleukin 7 receptor | 0.125 | |
SHC1 | SHC (Src homology 2 domain containing) transforming protein 1 | 0.122 | |
CD8A | CD8a molecule | 0.122 | |
TRAF1 | TNF receptor-associated factor 1 | 0.120 | |
MAP4K1 | mitogen-activated protein kinase kinase kinase kinase 1 | 0.118 | |
CD3E | CD3e molecule, epsilon (CD3-TCR complex) | 0.118 | |
CCR7 | chemokine (C-C motif) receptor 7 | 0.118 | |
GRAP2 | GRB2-related adaptor protein 2 | 0.113 | |
JAK1 | Janus kinase 1 | 0.111 | |
MAPK14 | mitogen-activated protein kinase 14 | 0.111 | |
ID3 | inhibitor of DNA binding 3, dominant negative helix-loop-helix protein | 0.111 | |
ETS1 | v-ets erythroblastosis virus E26 oncogene homolog 1 (avian) | 0.104 | |
HLA-DPA1 | major histocompatibility complex, class II, DP alpha 1 | 0.103 | |
GFI1B | growth factor independent 1B transcription repressor | 0.101 | |
MAF | v-maf musculoaponeurotic fibrosarcoma oncogene homolog (avian) | 0.101 | |
MYOD1 | myogenic differentiation 1 | 0.100 | |
JAK2 | Janus kinase 2 | 0.097 | |
HLA-C | major histocompatibility complex, class I, C | 0.096 | |
CD80 | CD80 molecule | 0.096 | |
STAP2 | signal transducing adaptor family member 2 | 0.095 | |
ZFYVE9 | zinc finger, FYVE domain containing 9 | 0.093 | |
KPNA1 | karyopherin alpha 1 (importin alpha 5) | 0.093 | |
FAS | Fas (TNF receptor superfamily, member 6) | 0.090 | |
UBASH3B | ubiquitin associated and SH3 domain containing B | 0.089 | |
STRADB | STE20-related kinase adaptor beta | 0.089 | |
TCF12 | transcription factor 12 | 0.089 | |
NFATC1 | nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1 | 0.087 | |
CD83 | CD83 molecule | 0.085 | |
CDKN1A | cyclin-dependent kinase inhibitor 1A (p21, Cip1) | 0.084 | |
CD69 | CD69 molecule | 0.083 | |
CD7 | CD7 molecule | 0.081 | |
TAP2 | transporter 2, ATP-binding cassette, sub-family B (MDR/TAP) | 0.080 | |
RPS3A | ribosomal protein S3A | 0.077 | |
IL7 | interleukin 7 | 0.076 | |
U2AF1 | U2 small nuclear RNA auxiliary factor 1 | 0.075 | |
ID1 | inhibitor of DNA binding 1, dominant negative helix-loop-helix protein | 0.075 | |
HFE | hemochromatosis | 0.074 | |
FAIM3 | Fas apoptotic inhibitory molecule 3 | 0.074 | |
MYOG | myogenin (myogenic factor 4) | 0.073 | |
CSNK1G1 | casein kinase 1, gamma 1 | 0.071 | |
BCL2L1 | BCL2-like 1 | 0.071 |